RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 HMGCRP04035 888 aa14.89□□□□□ -0.03
SCN3B-205ENST00000528267 CALML3P27482 149 aa14.89□□□□□ -0.03
SCN3B-205ENST00000528267 HSD17B4P51659 736 aa14.89□□□□□ -0.03
SCN3B-205ENST00000528267 CACNB2Q08289 660 aaPredicted RBP14.89□□□□□ -0.03
SCN3B-205ENST00000528267 RABEP1Q15276 862 aa14.89□□□□□ -0.03
SCN3B-205ENST00000528267 PRAMEF19Q5SWL8 479 aa14.89□□□□□ -0.03
SCN3B-205ENST00000528267 OLFML2BQ68BL8 750 aa14.89□□□□□ -0.03
SCN3B-205ENST00000528267 RNF207Q6ZRF8 634 aa14.89□□□□□ -0.03
SCN3B-205ENST00000528267 SYTL5Q8TDW5 730 aaPredicted RBP14.89□□□□□ -0.03
SCN3B-205ENST00000528267 GTF3C6Q969F1 213 aa14.89□□□□□ -0.03
SCN3B-205ENST00000528267 DDX11Q96FC9 970 aa14.89□□□□□ -0.03
SCN3B-205ENST00000528267 AIFM3Q96NN9 605 aa14.89□□□□□ -0.03
SCN3B-205ENST00000528267 KATNBL1Q9H079 304 aa14.89□□□□□ -0.03
SCN3B-205ENST00000528267 UNC93B1Q9H1C4 597 aa14.89□□□□□ -0.03
SCN3B-205ENST00000528267 DIS3Q9Y2L1 958 aaKnown RBP14.89□□□□□ -0.03
SCN3B-205ENST00000528267 PFASO15067 1338 aa14.89□□□□□ -0.03
SCN3B-205ENST00000528267 POTEB2H3BUK9 544 aa14.88□□□□□ -0.03
SCN3B-205ENST00000528267 STXBP3O00186 592 aa14.88□□□□□ -0.03
SCN3B-205ENST00000528267 PRPF3O43395 683 aaKnown RBP14.88□□□□□ -0.03
SCN3B-205ENST00000528267 SNAI1O95863 264 aaPredicted RBP14.88□□□□□ -0.03
SCN3B-205ENST00000528267 CYBAP13498 195 aa14.88□□□□□ -0.03
SCN3B-205ENST00000528267 CCND3P30281 292 aaPredicted RBP14.88□□□□□ -0.03
SCN3B-205ENST00000528267 HOXA13P31271 388 aaPredicted RBP14.88□□□□□ -0.03
SCN3B-205ENST00000528267 PPP2R5BQ15173 497 aa14.88□□□□□ -0.03
SCN3B-205ENST00000528267 ANKRD1Q15327 319 aa14.88□□□□□ -0.03
SCN3B-205ENST00000528267 PFKFB3Q16875 520 aaPredicted RBP14.88□□□□□ -0.03
SCN3B-205ENST00000528267 MAMDC4Q6UXC1 1216 aa14.88□□□□□ -0.03
SCN3B-205ENST00000528267 RGS22Q8NE09 1264 aa14.88□□□□□ -0.03
SCN3B-205ENST00000528267 SLC26A6Q9BXS9 759 aa14.88□□□□□ -0.03
SCN3B-205ENST00000528267 UPF2Q9HAU5 1272 aaKnown RBP14.88□□□□□ -0.03
SCN3B-205ENST00000528267 MRPL11Q9Y3B7 192 aaKnown RBP14.88□□□□□ -0.03
SCN3B-205ENST00000528267 CCDC196A0A1B0GTZ2 297 aa14.87□□□□□ -0.03
SCN3B-205ENST00000528267 MEIS2O14770 477 aa14.87□□□□□ -0.03
SCN3B-205ENST00000528267 JAK2O60674 1132 aa14.87□□□□□ -0.03
SCN3B-205ENST00000528267 PRKAR2AP13861 404 aaKnown RBP14.87□□□□□ -0.03
SCN3B-205ENST00000528267 ALDH5A1P51649 535 aaPredicted RBP14.87□□□□□ -0.03
SCN3B-205ENST00000528267 HEATR3Q7Z4Q2 680 aa14.87□□□□□ -0.03
SCN3B-205ENST00000528267 TAAR1Q96RJ0 339 aa14.87□□□□□ -0.03
SCN3B-205ENST00000528267 TINF2Q9BSI4 451 aa14.87□□□□□ -0.03
SCN3B-205ENST00000528267 RNF26Q9BY78 433 aaPredicted RBP14.87□□□□□ -0.03
SCN3B-205ENST00000528267 SLKQ9H2G2 1235 aaPredicted RBP14.87□□□□□ -0.03
SCN3B-205ENST00000528267 SEC63Q9UGP8 760 aaKnown RBP14.87□□□□□ -0.03
SCN3B-205ENST00000528267 PNMA2Q9UL42 364 aa14.87□□□□□ -0.03
SCN3B-205ENST00000528267 KIAA1217Q5T5P2 1943 aa14.87□□□□□ -0.03
SCN3B-205ENST00000528267 POTEFA5A3E0 1075 aa14.86□□□□□ -0.03
SCN3B-205ENST00000528267 ADCY6O43306 1168 aa14.86□□□□□ -0.03
SCN3B-205ENST00000528267 CFBP00751 764 aa14.86□□□□□ -0.03
SCN3B-205ENST00000528267 ZNF865P0CJ78 1059 aaPredicted RBP14.86□□□□□ -0.03
SCN3B-205ENST00000528267 CCL5P13501 91 aa14.86□□□□□ -0.03
SCN3B-205ENST00000528267 SCG2P13521 617 aa14.86□□□□□ -0.03
SCN3B-205ENST00000528267 FDPSP14324 419 aaKnown RBP14.86□□□□□ -0.03
SCN3B-205ENST00000528267 PTGS1P23219 599 aa14.86□□□□□ -0.03
SCN3B-205ENST00000528267 EDNRBP24530 442 aa14.86□□□□□ -0.03
SCN3B-205ENST00000528267 USP17L6PQ6QN14 398 aa14.86□□□□□ -0.03
SCN3B-205ENST00000528267 ARMCX2Q7L311 632 aa14.86□□□□□ -0.03
SCN3B-205ENST00000528267 ZNF467Q7Z7K2 595 aaPredicted RBP14.86□□□□□ -0.03
SCN3B-205ENST00000528267 NSUN7Q8NE18 718 aaKnown RBP14.86□□□□□ -0.03
SCN3B-205ENST00000528267 MORC4Q8TE76 937 aa14.86□□□□□ -0.03
SCN3B-205ENST00000528267 BARHL2Q9NY43 387 aa14.86□□□□□ -0.03
SCN3B-205ENST00000528267 KIAA0100Q14667 2235 aaKnown RBP14.85□□□□□ -0.03
SCN3B-205ENST00000528267 UBE2SQ16763 222 aa14.85□□□□□ -0.03
SCN3B-205ENST00000528267 TMEM63BQ5T3F8 832 aa14.85□□□□□ -0.03
SCN3B-205ENST00000528267 CCDC83Q8IWF9 413 aa14.85□□□□□ -0.03
SCN3B-205ENST00000528267 IL31RAQ8NI17 732 aa14.85□□□□□ -0.03
SCN3B-205ENST00000528267 PAK6Q9NQU5 681 aaPredicted RBP14.85□□□□□ -0.03
SCN3B-205ENST00000528267 GJB4Q9NTQ9 266 aa14.85□□□□□ -0.03
SCN3B-205ENST00000528267 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.85□□□□□ -0.03
SCN3B-205ENST00000528267 LIMCH1Q9UPQ0 1083 aa14.85□□□□□ -0.03
SCN3B-205ENST00000528267 SYNGAP1Q96PV0 1343 aa14.85□□□□□ -0.03
SCN3B-205ENST00000528267 NPY5RQ15761 445 aa14.84□□□□□ -0.03
SCN3B-205ENST00000528267 MCF2L2Q86YR7 1114 aa14.84□□□□□ -0.03
SCN3B-205ENST00000528267 TRMT44Q8IYL2 757 aaKnown RBP14.84□□□□□ -0.03
SCN3B-205ENST00000528267 LENG1Q96BZ8 264 aaPredicted RBP14.84□□□□□ -0.03
SCN3B-205ENST00000528267 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.84□□□□□ -0.03
SCN3B-205ENST00000528267 SLC5A4Q9NY91 659 aa14.84□□□□□ -0.03
SCN3B-205ENST00000528267 VPS54Q9P1Q0 977 aa14.84□□□□□ -0.03
SCN3B-205ENST00000528267 BIN2Q9UBW5 565 aaPredicted RBP14.84□□□□□ -0.03
SCN3B-205ENST00000528267 FRMPD4Q14CM0 1322 aa14.84□□□□□ -0.03
SCN3B-205ENST00000528267 RPTORQ8N122 1335 aa14.84□□□□□ -0.03
SCN3B-205ENST00000528267 STK36Q9NRP7 1315 aa14.84□□□□□ -0.03
SCN3B-205ENST00000528267 MYH7BA7E2Y1 1941 aa14.84□□□□□ -0.03
SCN3B-205ENST00000528267 DOCK5Q9H7D0 1870 aa14.83□□□□□ -0.04
SCN3B-205ENST00000528267 PIK3CDO00329 1044 aa14.83□□□□□ -0.04
SCN3B-205ENST00000528267 EIF2AK2P19525 551 aaKnown RBP14.83□□□□□ -0.04
SCN3B-205ENST00000528267 CLK2P49760 499 aaKnown RBP14.83□□□□□ -0.04
SCN3B-205ENST00000528267 NAPAP54920 295 aa14.83□□□□□ -0.04
SCN3B-205ENST00000528267 SOX10P56693 466 aa14.83□□□□□ -0.04
SCN3B-205ENST00000528267 UBXN2AP68543 259 aa14.83□□□□□ -0.04
SCN3B-205ENST00000528267 SSRP1Q08945 709 aaKnown RBP14.83□□□□□ -0.04
SCN3B-205ENST00000528267 MFSD14CQ5VZR4 134 aa14.83□□□□□ -0.04
SCN3B-205ENST00000528267 ANO1Q5XXA6 986 aa14.83□□□□□ -0.04
SCN3B-205ENST00000528267 LHX8Q68G74 356 aa14.83□□□□□ -0.04
SCN3B-205ENST00000528267 PPP1R18Q6NYC8 613 aa14.83□□□□□ -0.04
SCN3B-205ENST00000528267 FBXO16Q8IX29 292 aaPredicted RBP14.83□□□□□ -0.04
SCN3B-205ENST00000528267 ZFP91Q96JP5 570 aaPredicted RBP14.83□□□□□ -0.04
SCN3B-205ENST00000528267 PGBD1Q96JS3 809 aa14.83□□□□□ -0.04
SCN3B-205ENST00000528267 PXMP2Q9NR77 195 aa14.83□□□□□ -0.04
SCN3B-205ENST00000528267 PDGFCQ9NRA1 345 aa14.83□□□□□ -0.04
SCN3B-205ENST00000528267 TMEM260Q9NX78 707 aa14.83□□□□□ -0.04
SCN3B-205ENST00000528267 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms