RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 PCDHB15Q9Y5E8 787 aa13.84□□□□□ -0.19
CAPN1-204ENST00000526468 TRANK1O15050 2925 aa13.83□□□□□ -0.2
CAPN1-204ENST00000526468 PTPDC1A2A3K4 754 aa13.83□□□□□ -0.2
CAPN1-204ENST00000526468 DYNC1LI2O43237 492 aaPredicted RBP13.83□□□□□ -0.2
CAPN1-204ENST00000526468 B4GALT4O60513 344 aa13.83□□□□□ -0.2
CAPN1-204ENST00000526468 SLC16A2P36021 539 aa13.83□□□□□ -0.2
CAPN1-204ENST00000526468 CCL23P55773 120 aa13.83□□□□□ -0.2
CAPN1-204ENST00000526468 TJAP1Q5JTD0 557 aa13.83□□□□□ -0.2
CAPN1-204ENST00000526468 SYDE2Q5VT97 1194 aa13.83□□□□□ -0.2
CAPN1-204ENST00000526468 SLC30A10Q6XR72 485 aa13.83□□□□□ -0.2
CAPN1-204ENST00000526468 PURBQ96QR8 312 aaKnown RBP13.83□□□□□ -0.2
CAPN1-204ENST00000526468 NOC4LQ9BVI4 516 aaKnown RBP13.83□□□□□ -0.2
CAPN1-204ENST00000526468 RANBP17Q9H2T7 1088 aaKnown RBP13.83□□□□□ -0.2
CAPN1-204ENST00000526468 NKX2-4Q9H2Z4 354 aa13.83□□□□□ -0.2
CAPN1-204ENST00000526468 CXXC1Q9P0U4 656 aaPredicted RBP13.83□□□□□ -0.2
CAPN1-204ENST00000526468 ADD3Q9UEY8 706 aaKnown RBP13.83□□□□□ -0.2
CAPN1-204ENST00000526468 ZBBXA8MT70 800 aa13.82□□□□□ -0.2
CAPN1-204ENST00000526468 NFIBO00712 420 aa13.82□□□□□ -0.2
CAPN1-204ENST00000526468 ORC4O43929 436 aa13.82□□□□□ -0.2
CAPN1-204ENST00000526468 ALDH5A1P51649 535 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-204ENST00000526468 KIAA1211Q6ZU35 1233 aa13.82□□□□□ -0.2
CAPN1-204ENST00000526468 OTOP2Q7RTS6 562 aa13.82□□□□□ -0.2
CAPN1-204ENST00000526468 SLC43A3Q8NBI5 491 aa13.82□□□□□ -0.2
CAPN1-204ENST00000526468 HERVK_113Q902F9 699 aa13.82□□□□□ -0.2
CAPN1-204ENST00000526468 TRPV6Q9H1D0 765 aa13.82□□□□□ -0.2
CAPN1-204ENST00000526468 WNT8AQ9H1J5 351 aa13.82□□□□□ -0.2
CAPN1-204ENST00000526468 GPCPD1Q9NPB8 672 aa13.82□□□□□ -0.2
CAPN1-204ENST00000526468 PRDM6Q9NQX0 595 aa13.82□□□□□ -0.2
CAPN1-204ENST00000526468 THEGQ9P2T0 379 aa13.82□□□□□ -0.2
CAPN1-204ENST00000526468 SALL3Q9BXA9 1300 aa13.82□□□□□ -0.2
CAPN1-204ENST00000526468 REV3LO60673 3130 aa13.81□□□□□ -0.2
CAPN1-204ENST00000526468 A0A0D9SFI3 127 aa13.81□□□□□ -0.2
CAPN1-204ENST00000526468 TOP1P11387 765 aaKnown RBP13.81□□□□□ -0.2
CAPN1-204ENST00000526468 CALML3P27482 149 aa13.81□□□□□ -0.2
CAPN1-204ENST00000526468 BAATQ14032 418 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-204ENST00000526468 TMEM63BQ5T3F8 832 aa13.81□□□□□ -0.2
CAPN1-204ENST00000526468 TTBK2Q6IQ55 1244 aa13.81□□□□□ -0.2
CAPN1-204ENST00000526468 TAPT1Q6NXT6 567 aa13.81□□□□□ -0.2
CAPN1-204ENST00000526468 EVI5LQ96CN4 794 aa13.81□□□□□ -0.2
CAPN1-204ENST00000526468 SCLYQ96I15 445 aa13.81□□□□□ -0.2
CAPN1-204ENST00000526468 ANAPC4Q9UJX5 808 aa13.81□□□□□ -0.2
CAPN1-204ENST00000526468 ATG2AQ2TAZ0 1938 aa13.81□□□□□ -0.2
CAPN1-204ENST00000526468 GRIN2DO15399 1336 aa13.81□□□□□ -0.2
CAPN1-204ENST00000526468 RAD50Q92878 1312 aa13.81□□□□□ -0.2
CAPN1-204ENST00000526468 FGBP02675 491 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 MYL3P08590 195 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 IGFBP4P22692 258 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 CPT1AP50416 773 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 HAND2P61296 217 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 PPP2R5BQ15173 497 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 DUSP28Q4G0W2 176 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 FAM47CQ5HY64 1035 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 PPP2R2DQ66LE6 453 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 IQSEC1Q6DN90 963 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 OR6J1Q8NGC5 347 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 FAM227BQ96M60 508 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 TMEM47Q9BQJ4 181 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 SEZ6LQ9BYH1 1024 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 WDR11Q9BZH6 1224 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 ALDH8A1Q9H2A2 487 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-204ENST00000526468 SLC28A3Q9HAS3 691 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 HELLSQ9NRZ9 838 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 TRMT13Q9NUP7 481 aaKnown RBP13.8□□□□□ -0.2
CAPN1-204ENST00000526468 POLR3EQ9NVU0 708 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 YBX2Q9Y2T7 364 aaKnown RBP13.8□□□□□ -0.2
CAPN1-204ENST00000526468 Q9Y3F1 56 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 TNKSO95271 1327 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 ZMYM6O95789 1325 aa13.8□□□□□ -0.2
CAPN1-204ENST00000526468 PDHBP11177 359 aa13.79□□□□□ -0.2
CAPN1-204ENST00000526468 RABGGTBP53611 331 aa13.79□□□□□ -0.2
CAPN1-204ENST00000526468 RRP1P56182 461 aaKnown RBP13.79□□□□□ -0.2
CAPN1-204ENST00000526468 PDE4DQ08499 809 aa13.79□□□□□ -0.2
CAPN1-204ENST00000526468 CCDC85BQ15834 202 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-204ENST00000526468 AKNAD1Q5T1N1 836 aa13.79□□□□□ -0.2
CAPN1-204ENST00000526468 ANKRD45Q5TZF3 282 aa13.79□□□□□ -0.2
CAPN1-204ENST00000526468 RNF207Q6ZRF8 634 aa13.79□□□□□ -0.2
CAPN1-204ENST00000526468 MICALL1Q8N3F8 863 aa13.79□□□□□ -0.2
CAPN1-204ENST00000526468 IL27Q8NEV9 243 aa13.79□□□□□ -0.2
CAPN1-204ENST00000526468 MORC4Q8TE76 937 aa13.79□□□□□ -0.2
CAPN1-204ENST00000526468 MPHOSPH6Q99547 160 aaKnown RBP13.79□□□□□ -0.2
CAPN1-204ENST00000526468 SLC4A7Q9Y6M7 1214 aa13.79□□□□□ -0.2
CAPN1-204ENST00000526468 CCDC171Q6TFL3 1326 aa13.79□□□□□ -0.2
CAPN1-204ENST00000526468 RALGAPA2Q2PPJ7 1873 aa13.78□□□□□ -0.2
CAPN1-204ENST00000526468 LOXHD1Q8IVV2 1947 aa13.78□□□□□ -0.2
CAPN1-204ENST00000526468 CYP2C9P11712 490 aa13.78□□□□□ -0.2
CAPN1-204ENST00000526468 NOVP48745 357 aa13.78□□□□□ -0.2
CAPN1-204ENST00000526468 PURAQ00577 322 aaKnown RBP13.78□□□□□ -0.2
CAPN1-204ENST00000526468 NMIQ13287 307 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-204ENST00000526468 ADGRE1Q14246 886 aa13.78□□□□□ -0.2
CAPN1-204ENST00000526468 BRDTQ58F21 947 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-204ENST00000526468 BTNL9Q6UXG8 535 aa13.78□□□□□ -0.2
CAPN1-204ENST00000526468 DEFB128Q7Z7B8 93 aa13.78□□□□□ -0.2
CAPN1-204ENST00000526468 ZNF589Q86UQ0 364 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-204ENST00000526468 RPUSD2Q8IZ73 545 aaKnown RBP13.78□□□□□ -0.2
CAPN1-204ENST00000526468 CCDC136Q96JN2 1154 aa13.78□□□□□ -0.2
CAPN1-204ENST00000526468 GPHNQ9NQX3 736 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-204ENST00000526468 WDR19Q8NEZ3 1342 aa13.78□□□□□ -0.2
CAPN1-204ENST00000526468 LOC102724159A0A0B4J2E5 919 aa13.77□□□□□ -0.21
CAPN1-204ENST00000526468 TNFRSF10AO00220 468 aa13.77□□□□□ -0.21
CAPN1-204ENST00000526468 PFKMP08237 780 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms