RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 DNAJC14Q6Y2X3 702 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-219ENST00000526299 TTC9BQ8N6N2 239 aa5.17□□□□□ -1.58
ECHDC1-219ENST00000526299 DHRS1Q96LJ7 313 aa5.17□□□□□ -1.58
ECHDC1-219ENST00000526299 GP6Q9HCN6 339 aa5.17□□□□□ -1.58
ECHDC1-219ENST00000526299 TBC1D8O95759 1140 aa5.16□□□□□ -1.58
ECHDC1-219ENST00000526299 C6P13671 934 aa5.16□□□□□ -1.58
ECHDC1-219ENST00000526299 PMS1P54277 932 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-219ENST00000526299 AXDND1Q5T1B0 1012 aaPredicted RBP5.16□□□□□ -1.58
ECHDC1-219ENST00000526299 TTLL7Q6ZT98 887 aa5.16□□□□□ -1.58
ECHDC1-219ENST00000526299 Q8N1X5 172 aa5.16□□□□□ -1.58
ECHDC1-219ENST00000526299 FIBCD1Q8N539 461 aa5.16□□□□□ -1.58
ECHDC1-219ENST00000526299 CPA5Q8WXQ8 436 aa5.16□□□□□ -1.58
ECHDC1-219ENST00000526299 NKD1Q969G9 470 aa5.16□□□□□ -1.58
ECHDC1-219ENST00000526299 DDX11Q96FC9 970 aa5.16□□□□□ -1.58
ECHDC1-219ENST00000526299 FAM86C1Q9NVL1 165 aa5.16□□□□□ -1.58
ECHDC1-219ENST00000526299 RWDD3Q9Y3V2 267 aa5.16□□□□□ -1.58
ECHDC1-219ENST00000526299 SLPIP03973 132 aa5.15□□□□□ -1.59
ECHDC1-219ENST00000526299 TP53P04637 393 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-219ENST00000526299 CACNB2Q08289 660 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-219ENST00000526299 RGL3Q3MIN7 710 aa5.15□□□□□ -1.59
ECHDC1-219ENST00000526299 ANKRD39Q53RE8 183 aa5.15□□□□□ -1.59
ECHDC1-219ENST00000526299 INTS3Q68E01 1043 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-219ENST00000526299 SPRED1Q7Z699 444 aa5.15□□□□□ -1.59
ECHDC1-219ENST00000526299 RGS22Q8NE09 1264 aa5.15□□□□□ -1.59
ECHDC1-219ENST00000526299 CHST13Q8NET6 341 aa5.15□□□□□ -1.59
ECHDC1-219ENST00000526299 ZDHHC15Q96MV8 337 aa5.15□□□□□ -1.59
ECHDC1-219ENST00000526299 SYT3Q9BQG1 590 aa5.15□□□□□ -1.59
ECHDC1-219ENST00000526299 SSBP3Q9BWW4 388 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-219ENST00000526299 ST6GALNAC2Q9UJ37 374 aa5.15□□□□□ -1.59
ECHDC1-219ENST00000526299 INVSQ9Y283 1065 aa5.15□□□□□ -1.59
ECHDC1-219ENST00000526299 ZNF451Q9Y4E5 1061 aa5.15□□□□□ -1.59
ECHDC1-219ENST00000526299 FHOD1Q9Y613 1164 aa5.15□□□□□ -1.59
ECHDC1-219ENST00000526299 SMARCA5O60264 1052 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-219ENST00000526299 PPP1R11O60927 126 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-219ENST00000526299 CD247P20963 164 aa5.14□□□□□ -1.59
ECHDC1-219ENST00000526299 TACR2P21452 398 aa5.14□□□□□ -1.59
ECHDC1-219ENST00000526299 ITGAEP38570 1179 aa5.14□□□□□ -1.59
ECHDC1-219ENST00000526299 KRTAP1-1Q07627 177 aa5.14□□□□□ -1.59
ECHDC1-219ENST00000526299 LIMS2Q7Z4I7 341 aa5.14□□□□□ -1.59
ECHDC1-219ENST00000526299 CABP7Q86V35 215 aa5.14□□□□□ -1.59
ECHDC1-219ENST00000526299 SLITRK4Q8IW52 837 aa5.14□□□□□ -1.59
ECHDC1-219ENST00000526299 LZTR1Q8N653 840 aa5.14□□□□□ -1.59
ECHDC1-219ENST00000526299 LINC00482Q8N8I6 264 aa5.14□□□□□ -1.59
ECHDC1-219ENST00000526299 SH3RF3Q8TEJ3 882 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-219ENST00000526299 DVL3Q92997 716 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-219ENST00000526299 MRIQ9BWK5 157 aa5.14□□□□□ -1.59
ECHDC1-219ENST00000526299 NOL6Q9H6R4 1146 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-219ENST00000526299 GGT7Q9UJ14 662 aa5.14□□□□□ -1.59
ECHDC1-219ENST00000526299 SF3B6Q9Y3B4 125 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-219ENST00000526299 GDF5P43026 501 aa5.13□□□□□ -1.59
ECHDC1-219ENST00000526299 POU4F1Q01851 419 aa5.13□□□□□ -1.59
ECHDC1-219ENST00000526299 TRIM26Q12899 539 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-219ENST00000526299 SLC9A5Q14940 896 aa5.13□□□□□ -1.59
ECHDC1-219ENST00000526299 ZFPM1Q8IX07 1006 aa5.13□□□□□ -1.59
ECHDC1-219ENST00000526299 SMARCC1Q92922 1105 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-219ENST00000526299 PEX11GQ96HA9 241 aa5.13□□□□□ -1.59
ECHDC1-219ENST00000526299 GORASP1Q9BQQ3 440 aa5.13□□□□□ -1.59
ECHDC1-219ENST00000526299 MCMBPQ9BTE3 642 aa5.13□□□□□ -1.59
ECHDC1-219ENST00000526299 NUDT5Q9UKK9 219 aa5.13□□□□□ -1.59
ECHDC1-219ENST00000526299 SIT1Q9Y3P8 196 aa5.13□□□□□ -1.59
ECHDC1-219ENST00000526299 ZNF536O15090 1300 aa5.13□□□□□ -1.59
ECHDC1-219ENST00000526299 C8BP07358 591 aa5.12□□□□□ -1.59
ECHDC1-219ENST00000526299 ITGA4P13612 1032 aa5.12□□□□□ -1.59
ECHDC1-219ENST00000526299 PPP2R5DQ14738 602 aa5.12□□□□□ -1.59
ECHDC1-219ENST00000526299 CDSNQ15517 529 aa5.12□□□□□ -1.59
ECHDC1-219ENST00000526299 ZYXQ15942 572 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-219ENST00000526299 LGI4Q8N135 537 aa5.12□□□□□ -1.59
ECHDC1-219ENST00000526299 NETO2Q8NC67 525 aa5.12□□□□□ -1.59
ECHDC1-219ENST00000526299 MTA3Q9BTC8 594 aa5.12□□□□□ -1.59
ECHDC1-219ENST00000526299 MENTQ9BUN1 341 aa5.12□□□□□ -1.59
ECHDC1-219ENST00000526299 NT5C1AQ9BXI3 368 aa5.12□□□□□ -1.59
ECHDC1-219ENST00000526299 GULP1Q9UBP9 304 aa5.12□□□□□ -1.59
ECHDC1-219ENST00000526299 CYP2C8P10632 490 aa5.11□□□□□ -1.59
ECHDC1-219ENST00000526299 THBS2P35442 1172 aa5.11□□□□□ -1.59
ECHDC1-219ENST00000526299 KIAA2012Q0VF49 1180 aa5.11□□□□□ -1.59
ECHDC1-219ENST00000526299 RCSD1Q6JBY9 416 aa5.11□□□□□ -1.59
ECHDC1-219ENST00000526299 CPNE8Q86YQ8 564 aa5.11□□□□□ -1.59
ECHDC1-219ENST00000526299 C11orf84Q9BUA3 381 aaPredicted RBP5.11□□□□□ -1.59
ECHDC1-219ENST00000526299 ZNRF3Q9ULT6 936 aa5.11□□□□□ -1.59
ECHDC1-219ENST00000526299 MROH6A6NGR9 719 aa5.1□□□□□ -1.59
ECHDC1-219ENST00000526299 STXBP3O00186 592 aa5.1□□□□□ -1.59
ECHDC1-219ENST00000526299 AURKAO14965 403 aa5.1□□□□□ -1.59
ECHDC1-219ENST00000526299 ZBTB7AO95365 584 aa5.1□□□□□ -1.59
ECHDC1-219ENST00000526299 RPL13P26373 211 aaKnown RBP5.1□□□□□ -1.59
ECHDC1-219ENST00000526299 ACVRL1P37023 503 aa5.1□□□□□ -1.59
ECHDC1-219ENST00000526299 EEF1DP3Q658K8 133 aa5.1□□□□□ -1.59
ECHDC1-219ENST00000526299 WWC2Q6AWC2 1192 aa5.1□□□□□ -1.59
ECHDC1-219ENST00000526299 MCTP2Q6DN12 878 aa5.1□□□□□ -1.59
ECHDC1-219ENST00000526299 CRIP3Q6Q6R5 217 aa5.1□□□□□ -1.59
ECHDC1-219ENST00000526299 GLB1LQ6UWU2 654 aa5.1□□□□□ -1.59
ECHDC1-219ENST00000526299 HS2ST1Q7LGA3 356 aa5.1□□□□□ -1.59
ECHDC1-219ENST00000526299 STK32CQ86UX6 486 aa5.1□□□□□ -1.59
ECHDC1-219ENST00000526299 ADCY4Q8NFM4 1077 aa5.1□□□□□ -1.59
ECHDC1-219ENST00000526299 TIMELESSQ9UNS1 1208 aa5.1□□□□□ -1.59
ECHDC1-219ENST00000526299 CYR61O00622 381 aa5.09□□□□□ -1.59
ECHDC1-219ENST00000526299 CBFA2T2O43439 604 aa5.09□□□□□ -1.59
ECHDC1-219ENST00000526299 VAMP4O75379 141 aa5.09□□□□□ -1.59
ECHDC1-219ENST00000526299 ICAM4Q14773 271 aa5.09□□□□□ -1.59
ECHDC1-219ENST00000526299 FAM26FQ5R3K3 315 aa5.09□□□□□ -1.59
ECHDC1-219ENST00000526299 C9orf131Q5VYM1 1079 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms