RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 FAM86C1Q9NVL1 165 aa6.29□□□□□ -1.4
USP48-211ENST00000526044 GFOD1Q9NXC2 390 aa6.29□□□□□ -1.4
USP48-211ENST00000526044 PCDHB10Q9UN67 800 aa6.29□□□□□ -1.4
USP48-211ENST00000526044 CTNND2Q9UQB3 1225 aa6.29□□□□□ -1.4
USP48-211ENST00000526044 C3P01024 1663 aa6.29□□□□□ -1.4
USP48-211ENST00000526044 SETD1BQ9UPS6 1966 aaKnown RBP6.28□□□□□ -1.4
USP48-211ENST00000526044 PTPRTO14522 1441 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 DNAJC25-GNG10A0A024R161 153 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 SMAD7O15105 426 aaKnown RBP6.28□□□□□ -1.4
USP48-211ENST00000526044 SHOXO15266 292 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 CD247P20963 164 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 ETFBP38117 255 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 GDNFP39905 211 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 TEKQ02763 1124 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 RGL3Q3MIN7 710 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 RALGPS1Q5JS13 557 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 LINC00116Q8NCU8 138 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 FLAD1Q8NFF5 587 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 BHLHE22Q8NFJ8 381 aaPredicted RBP6.28□□□□□ -1.4
USP48-211ENST00000526044 DHX38Q92620 1227 aaKnown RBP6.28□□□□□ -1.4
USP48-211ENST00000526044 ADAMTS10Q9H324 1103 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 GP6Q9HCN6 339 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 PRKAG3Q9UGI9 489 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 TMEM59LQ9UK28 342 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 PREX1Q8TCU6 1659 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 PLA2R1Q13018 1463 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 SPHKAPQ2M3C7 1700 aa6.28□□□□□ -1.4
USP48-211ENST00000526044 CCDC144AA2RUR9 1427 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 NOS1P29475 1434 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 MEIS1O00470 390 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 AFMP43652 599 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 HEATR6Q6AI08 1181 aaKnown RBP6.27□□□□□ -1.41
USP48-211ENST00000526044 VHLLQ6RSH7 139 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 TOX2Q96NM4 488 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 HAUS7Q99871 368 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 DSCC1Q9BVC3 393 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 FOXP3Q9BZS1 431 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 FAM53CQ9NYF3 392 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 ACTR10Q9NZ32 417 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 TCFL5Q9UL49 500 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 MINPP1Q9UNW1 487 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 ZNF451Q9Y4E5 1061 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 TNRQ92752 1358 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 PTPRMP28827 1452 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 ERVK-7P63135 1459 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 KIF1BO60333 1816 aa6.27□□□□□ -1.41
USP48-211ENST00000526044 A0A087WZG4 1122 aa6.26□□□□□ -1.41
USP48-211ENST00000526044 GSNP06396 782 aa6.26□□□□□ -1.41
USP48-211ENST00000526044 SYPP08247 313 aa6.26□□□□□ -1.41
USP48-211ENST00000526044 ITGA4P13612 1032 aa6.26□□□□□ -1.41
USP48-211ENST00000526044 RPL10P27635 214 aaKnown RBP6.26□□□□□ -1.41
USP48-211ENST00000526044 ZEB1P37275 1124 aaPredicted RBP6.26□□□□□ -1.41
USP48-211ENST00000526044 HK2P52789 917 aa6.26□□□□□ -1.41
USP48-211ENST00000526044 ZNF445P59923 1031 aa6.26□□□□□ -1.41
USP48-211ENST00000526044 KIAA1211LQ6NV74 962 aa6.26□□□□□ -1.41
USP48-211ENST00000526044 THEMISQ8N1K5 641 aaPredicted RBP6.26□□□□□ -1.41
USP48-211ENST00000526044 ZSCAN18Q8TBC5 510 aaPredicted RBP6.26□□□□□ -1.41
USP48-211ENST00000526044 KLHL6Q8WZ60 621 aa6.26□□□□□ -1.41
USP48-211ENST00000526044 C8orf37Q96NL8 207 aa6.26□□□□□ -1.41
USP48-211ENST00000526044 ZNF408Q9H9D4 720 aa6.26□□□□□ -1.41
USP48-211ENST00000526044 C19orf73Q9NVV2 129 aa6.26□□□□□ -1.41
USP48-211ENST00000526044 ZNF281Q9Y2X9 895 aa6.26□□□□□ -1.41
USP48-211ENST00000526044 FHOD1Q9Y613 1164 aa6.26□□□□□ -1.41
USP48-211ENST00000526044 SPATA31D1Q6ZQQ2 1576 aa6.26□□□□□ -1.41
USP48-211ENST00000526044 TRPM2O94759 1503 aa6.25□□□□□ -1.41
USP48-211ENST00000526044 LRRC10BA6NIK2 292 aa6.25□□□□□ -1.41
USP48-211ENST00000526044 CBFA2T2O43439 604 aa6.25□□□□□ -1.41
USP48-211ENST00000526044 ZGLP1P0C6A0 271 aa6.25□□□□□ -1.41
USP48-211ENST00000526044 RAC2P15153 192 aa6.25□□□□□ -1.41
USP48-211ENST00000526044 BMP8BP34820 402 aa6.25□□□□□ -1.41
USP48-211ENST00000526044 CTSKP43235 329 aa6.25□□□□□ -1.41
USP48-211ENST00000526044 DUSP4Q13115 394 aa6.25□□□□□ -1.41
USP48-211ENST00000526044 NCAPHQ15003 741 aa6.25□□□□□ -1.41
USP48-211ENST00000526044 CWF19L1Q69YN2 538 aaKnown RBP6.25□□□□□ -1.41
USP48-211ENST00000526044 ADAT2Q7Z6V5 191 aaKnown RBP6.25□□□□□ -1.41
USP48-211ENST00000526044 BRF1Q92994 677 aa6.25□□□□□ -1.41
USP48-211ENST00000526044 KLHL25Q9H0H3 589 aa6.25□□□□□ -1.41
USP48-211ENST00000526044 GBP3Q9H0R5 595 aa6.25□□□□□ -1.41
USP48-211ENST00000526044 WHRNQ9P202 907 aa6.25□□□□□ -1.41
USP48-211ENST00000526044 DIS3Q9Y2L1 958 aaKnown RBP6.25□□□□□ -1.41
USP48-211ENST00000526044 R3HCC1Q9Y3T6 440 aaKnown RBP6.25□□□□□ -1.41
USP48-211ENST00000526044 SYNMO15061 1565 aa6.24□□□□□ -1.41
USP48-211ENST00000526044 TONSLQ96HA7 1378 aa6.24□□□□□ -1.41
USP48-211ENST00000526044 PPM1BO75688 479 aa6.24□□□□□ -1.41
USP48-211ENST00000526044 EPHX1P07099 455 aa6.24□□□□□ -1.41
USP48-211ENST00000526044 VAV1P15498 845 aa6.24□□□□□ -1.41
USP48-211ENST00000526044 ENDOUP21128 410 aaKnown RBP6.24□□□□□ -1.41
USP48-211ENST00000526044 RAP1GAPP47736 663 aa6.24□□□□□ -1.41
USP48-211ENST00000526044 WAPLQ7Z5K2 1190 aa6.24□□□□□ -1.41
USP48-211ENST00000526044 SPPL2CQ8IUH8 684 aa6.24□□□□□ -1.41
USP48-211ENST00000526044 FIBCD1Q8N539 461 aa6.24□□□□□ -1.41
USP48-211ENST00000526044 OXR1Q8N573 874 aa6.24□□□□□ -1.41
USP48-211ENST00000526044 PDZD8Q8NEN9 1154 aa6.24□□□□□ -1.41
USP48-211ENST00000526044 ZMYM5Q9UJ78 669 aa6.24□□□□□ -1.41
USP48-211ENST00000526044 SF3B6Q9Y3B4 125 aaKnown RBP6.24□□□□□ -1.41
USP48-211ENST00000526044 CLTCL1P53675 1640 aa6.24□□□□□ -1.41
USP48-211ENST00000526044 RPGRIP1LQ68CZ1 1315 aa6.24□□□□□ -1.41
USP48-211ENST00000526044 UGGT1Q9NYU2 1555 aa6.23□□□□□ -1.41
USP48-211ENST00000526044 NLRP1Q9C000 1473 aa6.23□□□□□ -1.41
USP48-211ENST00000526044 ANKRD34BA5PLL1 514 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms