RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 CAGE1Q8TC20 777 aa9.89□□□□□ -0.83
PUM1-213ENST00000524516 SP7Q8TDD2 431 aaPredicted RBP9.89□□□□□ -0.83
PUM1-213ENST00000524516 AFAP1L1Q8TED9 768 aa9.89□□□□□ -0.83
PUM1-213ENST00000524516 LMAN2LQ9H0V9 348 aa9.89□□□□□ -0.83
PUM1-213ENST00000524516 SH2D4AQ9H788 454 aa9.89□□□□□ -0.83
PUM1-213ENST00000524516 IGSF5Q9NSI5 407 aa9.89□□□□□ -0.83
PUM1-213ENST00000524516 FBXO28Q9NVF7 368 aa9.89□□□□□ -0.83
PUM1-213ENST00000524516 ZNF214Q9UL59 606 aaPredicted RBP9.89□□□□□ -0.83
PUM1-213ENST00000524516 SORCS3Q9UPU3 1222 aa9.89□□□□□ -0.83
PUM1-213ENST00000524516 FASNP49327 2511 aaKnown RBP9.89□□□□□ -0.83
PUM1-213ENST00000524516 SETXQ7Z333 2677 aaKnown RBP9.89□□□□□ -0.83
PUM1-213ENST00000524516 CACNA1FO60840 1977 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 RALGAPA2Q2PPJ7 1873 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 VWA5AO00534 786 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 ZBTB22O15209 634 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 WDR46O15213 610 aaKnown RBP9.88□□□□□ -0.83
PUM1-213ENST00000524516 PARNO95453 639 aaKnown RBP9.88□□□□□ -0.83
PUM1-213ENST00000524516 SELPP16109 830 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 SMPD1P17405 629 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 GUCY1A2P33402 732 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 CHMP4BP1P59074 171 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 HTRA4P83105 476 aaPredicted RBP9.88□□□□□ -0.83
PUM1-213ENST00000524516 COASYQ13057 564 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 PI16Q6UXB8 463 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 CCDC105Q8IYK2 499 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 RTKNQ9BST9 563 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 C11orf84Q9BUA3 381 aaPredicted RBP9.88□□□□□ -0.83
PUM1-213ENST00000524516 TEX13BQ9BXU2 312 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 KATNBL1Q9H079 304 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 ARHGEF10LQ9HCE6 1279 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 ADAMTS8Q9UP79 889 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 GPR179Q6PRD1 2367 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 MYH1P12882 1939 aa9.88□□□□□ -0.83
PUM1-213ENST00000524516 EP300Q09472 2414 aaPredicted RBP9.87□□□□□ -0.83
PUM1-213ENST00000524516 APAF1O14727 1248 aa9.87□□□□□ -0.83
PUM1-213ENST00000524516 RAD21O60216 631 aa9.87□□□□□ -0.83
PUM1-213ENST00000524516 BRD1O95696 1058 aa9.87□□□□□ -0.83
PUM1-213ENST00000524516 KCNA4P22459 653 aa9.87□□□□□ -0.83
PUM1-213ENST00000524516 USP5P45974 858 aa9.87□□□□□ -0.83
PUM1-213ENST00000524516 PURAQ00577 322 aaKnown RBP9.87□□□□□ -0.83
PUM1-213ENST00000524516 MVPQ14764 893 aaKnown RBP9.87□□□□□ -0.83
PUM1-213ENST00000524516 TCTN1Q2MV58 587 aa9.87□□□□□ -0.83
PUM1-213ENST00000524516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.87□□□□□ -0.83
PUM1-213ENST00000524516 SPATA5Q8NB90 893 aa9.87□□□□□ -0.83
PUM1-213ENST00000524516 DTWD2Q8NBA8 298 aa9.87□□□□□ -0.83
PUM1-213ENST00000524516 MTG1Q9BT17 334 aaPredicted RBP9.87□□□□□ -0.83
PUM1-213ENST00000524516 EHD4Q9H223 541 aa9.87□□□□□ -0.83
PUM1-213ENST00000524516 VCPKMTQ9H867 229 aa9.87□□□□□ -0.83
PUM1-213ENST00000524516 TSHZ2Q9NRE2 1034 aa9.87□□□□□ -0.83
PUM1-213ENST00000524516 CLEC1BQ9P126 229 aa9.87□□□□□ -0.83
PUM1-213ENST00000524516 NCDNQ9UBB6 729 aa9.87□□□□□ -0.83
PUM1-213ENST00000524516 BARX2Q9UMQ3 279 aaPredicted RBP9.87□□□□□ -0.83
PUM1-213ENST00000524516 ADAMTS5Q9UNA0 930 aa9.87□□□□□ -0.83
PUM1-213ENST00000524516 GRM6O15303 877 aa9.86□□□□□ -0.83
PUM1-213ENST00000524516 NBNO60934 754 aa9.86□□□□□ -0.83
PUM1-213ENST00000524516 UPP2O95045 317 aa9.86□□□□□ -0.83
PUM1-213ENST00000524516 ATF7P17544 494 aaPredicted RBP9.86□□□□□ -0.83
PUM1-213ENST00000524516 SHMT1P34896 483 aa9.86□□□□□ -0.83
PUM1-213ENST00000524516 CPT1AP50416 773 aa9.86□□□□□ -0.83
PUM1-213ENST00000524516 PTGISQ16647 500 aa9.86□□□□□ -0.83
PUM1-213ENST00000524516 PPM1JQ5JR12 505 aa9.86□□□□□ -0.83
PUM1-213ENST00000524516 NFRKBQ6P4R8 1299 aa9.86□□□□□ -0.83
PUM1-213ENST00000524516 TTC6Q86TZ1 520 aa9.86□□□□□ -0.83
PUM1-213ENST00000524516 FGD4Q96M96 766 aa9.86□□□□□ -0.83
PUM1-213ENST00000524516 HMG20BQ9P0W2 317 aa9.86□□□□□ -0.83
PUM1-213ENST00000524516 ANGPTL2Q9UKU9 493 aa9.86□□□□□ -0.83
PUM1-213ENST00000524516 PPP1R9AQ9ULJ8 1098 aa9.86□□□□□ -0.83
PUM1-213ENST00000524516 Q9Y3F1 56 aa9.86□□□□□ -0.83
PUM1-213ENST00000524516 CTDP1Q9Y5B0 961 aaPredicted RBP9.86□□□□□ -0.83
PUM1-213ENST00000524516 CEP250Q9BV73 2442 aa9.85□□□□□ -0.83
PUM1-213ENST00000524516 FRYLO94915 3013 aa9.85□□□□□ -0.83
PUM1-213ENST00000524516 PRR5-ARHGAP8B1AHC4 643 aa9.85□□□□□ -0.83
PUM1-213ENST00000524516 CIAO1O76071 339 aa9.85□□□□□ -0.83
PUM1-213ENST00000524516 CXCL10P02778 98 aa9.85□□□□□ -0.83
PUM1-213ENST00000524516 RFX5P48382 616 aaPredicted RBP9.85□□□□□ -0.83
PUM1-213ENST00000524516 PPP4CP60510 307 aa9.85□□□□□ -0.83
PUM1-213ENST00000524516 TIMM10P62072 90 aa9.85□□□□□ -0.83
PUM1-213ENST00000524516 ARHGAP8P85298 464 aa9.85□□□□□ -0.83
PUM1-213ENST00000524516 LMNB2Q03252 620 aa9.85□□□□□ -0.83
PUM1-213ENST00000524516 PTPN11Q06124 597 aaPredicted RBP9.85□□□□□ -0.83
PUM1-213ENST00000524516 GPNMBQ14956 572 aa9.85□□□□□ -0.83
PUM1-213ENST00000524516 GORABQ5T7V8 394 aa9.85□□□□□ -0.83
PUM1-213ENST00000524516 CWF19L1Q69YN2 538 aaKnown RBP9.85□□□□□ -0.83
PUM1-213ENST00000524516 EEPD1Q7L9B9 569 aa9.85□□□□□ -0.83
PUM1-213ENST00000524516 FAM133AQ8N9E0 248 aa9.85□□□□□ -0.83
PUM1-213ENST00000524516 RIPK3Q9Y572 518 aa9.85□□□□□ -0.83
PUM1-213ENST00000524516 ASB14A6NK59 587 aa9.84□□□□□ -0.83
PUM1-213ENST00000524516 MMP1P03956 469 aa9.84□□□□□ -0.83
PUM1-213ENST00000524516 RB1P06400 928 aa9.84□□□□□ -0.83
PUM1-213ENST00000524516 AOC1P19801 751 aa9.84□□□□□ -0.83
PUM1-213ENST00000524516 ICA1Q05084 483 aa9.84□□□□□ -0.83
PUM1-213ENST00000524516 BRDTQ58F21 947 aaPredicted RBP9.84□□□□□ -0.83
PUM1-213ENST00000524516 TMEM63BQ5T3F8 832 aa9.84□□□□□ -0.83
PUM1-213ENST00000524516 IQSEC1Q6DN90 963 aa9.84□□□□□ -0.83
PUM1-213ENST00000524516 KIAA1211Q6ZU35 1233 aa9.84□□□□□ -0.83
PUM1-213ENST00000524516 TMEM179Q6ZVK1 233 aa9.84□□□□□ -0.83
PUM1-213ENST00000524516 CLEC10AQ8IUN9 316 aa9.84□□□□□ -0.83
PUM1-213ENST00000524516 FBXO16Q8IX29 292 aaPredicted RBP9.84□□□□□ -0.83
PUM1-213ENST00000524516 CPXCR1Q8N123 301 aa9.84□□□□□ -0.83
PUM1-213ENST00000524516 FIBCD1Q8N539 461 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms