RNA–Protein interactions for RNA: ENST00000524432.5

MACF1-227, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 4,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-227ENST00000524432 FAM204AQ9H8W3 233 aa19.31■□□□□ 0.68
MACF1-227ENST00000524432 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.3■□□□□ 0.68
MACF1-227ENST00000524432 EIF4A3P38919 411 aaKnown RBP19.3■□□□□ 0.68
MACF1-227ENST00000524432 TTC31Q49AM3 519 aaPredicted RBP19.3■□□□□ 0.68
MACF1-227ENST00000524432 CERKLQ49MI3 558 aaPredicted RBP19.3■□□□□ 0.68
MACF1-227ENST00000524432 TBC1D9BQ66K14 1250 aa19.3■□□□□ 0.68
MACF1-227ENST00000524432 MB21D1Q8N884 522 aa19.3■□□□□ 0.68
MACF1-227ENST00000524432 TNS3Q68CZ2 1445 aa19.3■□□□□ 0.68
MACF1-227ENST00000524432 KRT5P13647 590 aa19.3■□□□□ 0.68
MACF1-227ENST00000524432 TCP1P17987 556 aaKnown RBP19.3■□□□□ 0.68
MACF1-227ENST00000524432 GUCY2DQ02846 1103 aa19.3■□□□□ 0.68
MACF1-227ENST00000524432 GSTA5Q7RTV2 222 aa19.3■□□□□ 0.68
MACF1-227ENST00000524432 MOCS3O95396 460 aa19.3■□□□□ 0.68
MACF1-227ENST00000524432 C2orf54Q08AI8 447 aa19.3■□□□□ 0.68
MACF1-227ENST00000524432 CCDC121Q6ZUS5 278 aa19.3■□□□□ 0.68
MACF1-227ENST00000524432 GLT8D2Q9H1C3 349 aa19.3■□□□□ 0.68
MACF1-227ENST00000524432 ABHD10Q9NUJ1 306 aa19.3■□□□□ 0.68
MACF1-227ENST00000524432 SERPINB13Q9UIV8 391 aa19.3■□□□□ 0.68
MACF1-227ENST00000524432 PXDNQ92626 1479 aa19.3■□□□□ 0.68
MACF1-227ENST00000524432 A0A1W2PRG0 241 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 POTEMA6NI47 508 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 HMGB2P26583 209 aaKnown RBP19.29■□□□□ 0.68
MACF1-227ENST00000524432 PPFIA1Q13136 1202 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 ABCC12Q96J65 1359 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 TTC26A0AVF1 554 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 SLC7A5Q01650 507 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 ARL6IP4Q66PJ3 421 aaKnown RBP19.29■□□□□ 0.68
MACF1-227ENST00000524432 PLA2G12BQ9BX93 195 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 KCNK9Q9NPC2 374 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 MYO1AQ9UBC5 1043 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 TUBE1Q9UJT0 475 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 ZBED6P86452 979 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 TBC1D10BQ4KMP7 808 aaPredicted RBP19.29■□□□□ 0.68
MACF1-227ENST00000524432 NSMFQ6X4W1 530 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 CEP57Q86XR8 500 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 CCDC114Q96M63 670 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 AK8Q96MA6 479 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 AGLP35573 1532 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 NR2F2P24468 414 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 FKBP3Q00688 224 aaKnown RBP19.29■□□□□ 0.68
MACF1-227ENST00000524432 BIRC3Q13489 604 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 LLGL1Q15334 1064 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 TXNRD1Q16881 649 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 DPH6Q7L8W6 267 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 USP37Q86T82 979 aa19.29■□□□□ 0.68
MACF1-227ENST00000524432 THRAP3Q9Y2W1 955 aaKnown RBP19.29■□□□□ 0.68
MACF1-227ENST00000524432 VGLL3A8MV65 326 aa19.28■□□□□ 0.68
MACF1-227ENST00000524432 STAT1P42224 750 aa19.28■□□□□ 0.68
MACF1-227ENST00000524432 ICA1Q05084 483 aa19.28■□□□□ 0.68
MACF1-227ENST00000524432 ANKRD65E5RJM6 399 aa19.28■□□□□ 0.68
MACF1-227ENST00000524432 GAS7O60861 476 aa19.28■□□□□ 0.68
MACF1-227ENST00000524432 FTCDO95954 541 aa19.28■□□□□ 0.68
MACF1-227ENST00000524432 SERPINB2P05120 415 aa19.28■□□□□ 0.68
MACF1-227ENST00000524432 CALCOCO2Q13137 446 aa19.28■□□□□ 0.68
MACF1-227ENST00000524432 NDST4Q9H3R1 872 aa19.28■□□□□ 0.68
MACF1-227ENST00000524432 ARHGEF10LQ9HCE6 1279 aa19.28■□□□□ 0.68
MACF1-227ENST00000524432 HDAC6Q9UBN7 1215 aa19.28■□□□□ 0.68
MACF1-227ENST00000524432 CACNB3P54284 484 aa19.28■□□□□ 0.68
MACF1-227ENST00000524432 GNGT1P63211 74 aa19.28■□□□□ 0.68
MACF1-227ENST00000524432 CASP8Q14790 479 aa19.28■□□□□ 0.68
MACF1-227ENST00000524432 CC2D1AQ6P1N0 951 aaPredicted RBP19.28■□□□□ 0.68
MACF1-227ENST00000524432 CLEC4GQ6UXB4 293 aa19.28■□□□□ 0.68
MACF1-227ENST00000524432 BCAS4Q8TDM0 211 aa19.28■□□□□ 0.68
MACF1-227ENST00000524432 HPS3Q969F9 1004 aa19.28■□□□□ 0.68
MACF1-227ENST00000524432 LAD1O00515 517 aa19.27■□□□□ 0.68
MACF1-227ENST00000524432 CEP85LQ5SZL2 805 aa19.27■□□□□ 0.68
MACF1-227ENST00000524432 DPH5Q9H2P9 285 aa19.27■□□□□ 0.68
MACF1-227ENST00000524432 PPANQ9NQ55 473 aaKnown RBP19.27■□□□□ 0.68
MACF1-227ENST00000524432 MTRF1LQ9UGC7 380 aaKnown RBP19.27■□□□□ 0.68
MACF1-227ENST00000524432 DIP2BQ9P265 1576 aa19.27■□□□□ 0.68
MACF1-227ENST00000524432 CLIC2O15247 247 aa19.27■□□□□ 0.68
MACF1-227ENST00000524432 SNAP25P60880 206 aa19.27■□□□□ 0.68
MACF1-227ENST00000524432 TTLL12Q14166 644 aaPredicted RBP19.27■□□□□ 0.68
MACF1-227ENST00000524432 MAN2A1Q16706 1144 aa19.27■□□□□ 0.68
MACF1-227ENST00000524432 UHMK1Q8TAS1 419 aaKnown RBP19.27■□□□□ 0.68
MACF1-227ENST00000524432 CHP1Q99653 195 aa19.27■□□□□ 0.68
MACF1-227ENST00000524432 DBNDD1Q9H9R9 158 aa19.27■□□□□ 0.68
MACF1-227ENST00000524432 KRT71Q3SY84 523 aa19.27■□□□□ 0.68
MACF1-227ENST00000524432 FBXO11Q86XK2 927 aa19.27■□□□□ 0.68
MACF1-227ENST00000524432 NUCKS1Q9H1E3 243 aaKnown RBP19.27■□□□□ 0.68
MACF1-227ENST00000524432 CUEDC2Q9H467 287 aa19.27■□□□□ 0.68
MACF1-227ENST00000524432 ADAMTS1Q9UHI8 967 aa19.27■□□□□ 0.68
MACF1-227ENST00000524432 UTP11Q9Y3A2 253 aaKnown RBP19.27■□□□□ 0.68
MACF1-227ENST00000524432 USP17L5A8MUK1 530 aa19.27■□□□□ 0.67
MACF1-227ENST00000524432 KRT12Q99456 494 aa19.27■□□□□ 0.67
MACF1-227ENST00000524432 KIF4AO95239 1232 aa19.26■□□□□ 0.67
MACF1-227ENST00000524432 GDF11O95390 407 aa19.26■□□□□ 0.67
MACF1-227ENST00000524432 FXR1P51114 621 aaKnown RBP eCLIP19.26■□□□□ 0.672e-6■■■□□ 18.1
MACF1-227ENST00000524432 GTF2A1P52655 376 aaPredicted RBP19.26■□□□□ 0.67
MACF1-227ENST00000524432 MRRFQ96E11 262 aaKnown RBP19.26■□□□□ 0.67
MACF1-227ENST00000524432 SYNCQ9H7C4 482 aa19.26■□□□□ 0.67
MACF1-227ENST00000524432 TMEM260Q9NX78 707 aa19.26■□□□□ 0.67
MACF1-227ENST00000524432 FAM196BA6NMK8 535 aa19.26■□□□□ 0.67
MACF1-227ENST00000524432 KANSL2Q9H9L4 492 aa19.26■□□□□ 0.67
MACF1-227ENST00000524432 MTUS1Q9ULD2 1270 aa19.26■□□□□ 0.67
MACF1-227ENST00000524432 KDM3AQ9Y4C1 1321 aa19.26■□□□□ 0.67
MACF1-227ENST00000524432 VIMP08670 466 aaKnown RBP19.26■□□□□ 0.67
MACF1-227ENST00000524432 KRIT1O00522 736 aa19.25■□□□□ 0.67
MACF1-227ENST00000524432 TTLL1O95922 423 aa19.25■□□□□ 0.67
MACF1-227ENST00000524432 EXOC3L4Q17RC7 722 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms