RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 PPP2R3BQ9Y5P8 575 aa23.52■■□□□ 1.36
SQLE-206ENST00000523430 LMOD1P29536 600 aaPredicted RBP23.51■■□□□ 1.35
SQLE-206ENST00000523430 HOXA13P31271 388 aaPredicted RBP23.51■■□□□ 1.35
SQLE-206ENST00000523430 TXKP42681 527 aa23.51■■□□□ 1.35
SQLE-206ENST00000523430 SPATA20Q8TB22 786 aa23.51■■□□□ 1.35
SQLE-206ENST00000523430 LPAR1Q92633 364 aa23.51■■□□□ 1.35
SQLE-206ENST00000523430 HOOK2Q96ED9 719 aa23.51■■□□□ 1.35
SQLE-206ENST00000523430 WDR46O15213 610 aaKnown RBP23.51■■□□□ 1.35
SQLE-206ENST00000523430 UBA7P41226 1012 aa23.51■■□□□ 1.35
SQLE-206ENST00000523430 STAT6P42226 847 aa23.51■■□□□ 1.35
SQLE-206ENST00000523430 CCDC34Q96HJ3 373 aa23.51■■□□□ 1.35
SQLE-206ENST00000523430 AK8Q96MA6 479 aa23.51■■□□□ 1.35
SQLE-206ENST00000523430 MTRQ99707 1265 aa23.51■■□□□ 1.35
SQLE-206ENST00000523430 CCSER1Q9C0I3 900 aa23.51■■□□□ 1.35
SQLE-206ENST00000523430 ADARB2Q9NS39 739 aaKnown RBP23.51■■□□□ 1.35
SQLE-206ENST00000523430 DPYDQ12882 1025 aa23.5■■□□□ 1.35
SQLE-206ENST00000523430 NAALADL2Q58DX5 795 aa23.5■■□□□ 1.35
SQLE-206ENST00000523430 DLK2Q6UY11 383 aa23.5■■□□□ 1.35
SQLE-206ENST00000523430 IGSF22Q8N9C0 903 aa23.5■■□□□ 1.35
SQLE-206ENST00000523430 RASSF8Q8NHQ8 419 aa23.5■■□□□ 1.35
SQLE-206ENST00000523430 LRRC15Q8TF66 581 aa23.5■■□□□ 1.35
SQLE-206ENST00000523430 SMCHD1A6NHR9 2005 aa23.5■■□□□ 1.35
SQLE-206ENST00000523430 VCAM1P19320 739 aa23.49■■□□□ 1.35
SQLE-206ENST00000523430 MORC3Q14149 939 aa23.49■■□□□ 1.35
SQLE-206ENST00000523430 CABP7Q86V35 215 aa23.49■■□□□ 1.35
SQLE-206ENST00000523430 CRYGNQ8WXF5 182 aa23.49■■□□□ 1.35
SQLE-206ENST00000523430 PLIN2Q99541 437 aa23.49■■□□□ 1.35
SQLE-206ENST00000523430 EMILIN3Q9NT22 766 aa23.49■■□□□ 1.35
SQLE-206ENST00000523430 PITPNM2Q9BZ72 1349 aa23.49■■□□□ 1.35
SQLE-206ENST00000523430 GCFC2P16383 781 aaKnown RBP23.49■■□□□ 1.35
SQLE-206ENST00000523430 ILDR2Q71H61 639 aa23.49■■□□□ 1.35
SQLE-206ENST00000523430 GJA10Q969M2 543 aa23.49■■□□□ 1.35
SQLE-206ENST00000523430 BLZF1Q9H2G9 400 aa23.49■■□□□ 1.35
SQLE-206ENST00000523430 PHIPQ8WWQ0 1821 aa23.48■■□□□ 1.35
SQLE-206ENST00000523430 SPDYE3A6NKU9 549 aa23.48■■□□□ 1.35
SQLE-206ENST00000523430 SMC2O95347 1197 aa23.48■■□□□ 1.35
SQLE-206ENST00000523430 PTPRAP18433 802 aa23.48■■□□□ 1.35
SQLE-206ENST00000523430 FXR2P51116 673 aaKnown RBP eCLIP23.48■■□□□ 1.356e-7■■□□□ 12.8
SQLE-206ENST00000523430 ARHGAP4P98171 946 aa23.48■■□□□ 1.35
SQLE-206ENST00000523430 SPP2Q13103 211 aa23.48■■□□□ 1.35
SQLE-206ENST00000523430 HAS1Q92839 578 aa23.48■■□□□ 1.35
SQLE-206ENST00000523430 KLRG1Q96E93 195 aa23.48■■□□□ 1.35
SQLE-206ENST00000523430 SLF1Q9BQI6 1058 aa23.48■■□□□ 1.35
SQLE-206ENST00000523430 MMTAG2Q9BU76 263 aaKnown RBP23.48■■□□□ 1.35
SQLE-206ENST00000523430 TANGO6Q9C0B7 1094 aa23.48■■□□□ 1.35
SQLE-206ENST00000523430 PICK1Q9NRD5 415 aa23.48■■□□□ 1.35
SQLE-206ENST00000523430 PIK3CDO00329 1044 aa23.47■■□□□ 1.35
SQLE-206ENST00000523430 NCAPHQ15003 741 aa23.47■■□□□ 1.35
SQLE-206ENST00000523430 RRAGBQ5VZM2 374 aa23.47■■□□□ 1.35
SQLE-206ENST00000523430 TRIML1Q8N9V2 468 aa23.47■■□□□ 1.35
SQLE-206ENST00000523430 POTEMA6NI47 508 aa23.47■■□□□ 1.35
SQLE-206ENST00000523430 ADM5C9JUS6 153 aa23.47■■□□□ 1.35
SQLE-206ENST00000523430 PLCG1P19174 1290 aa23.47■■□□□ 1.35
SQLE-206ENST00000523430 SREBF1P36956 1147 aa23.47■■□□□ 1.35
SQLE-206ENST00000523430 PRKG1Q13976 671 aa23.47■■□□□ 1.35
SQLE-206ENST00000523430 LDHDQ86WU2 507 aa23.47■■□□□ 1.35
SQLE-206ENST00000523430 WDR18Q9BV38 432 aa23.47■■□□□ 1.35
SQLE-206ENST00000523430 CCDC39Q9UFE4 941 aa23.47■■□□□ 1.35
SQLE-206ENST00000523430 ZNF536O15090 1300 aa23.46■■□□□ 1.35
SQLE-206ENST00000523430 USP11P51784 963 aa23.46■■□□□ 1.35
SQLE-206ENST00000523430 ZNF75DP51815 510 aa23.46■■□□□ 1.35
SQLE-206ENST00000523430 TRAF1Q13077 416 aa23.46■■□□□ 1.35
SQLE-206ENST00000523430 CUL4BQ13620 913 aa23.46■■□□□ 1.35
SQLE-206ENST00000523430 TMEM266Q2M3C6 531 aa23.46■■□□□ 1.35
SQLE-206ENST00000523430 MCTP2Q6DN12 878 aa23.46■■□□□ 1.35
SQLE-206ENST00000523430 PLA2G4DQ86XP0 818 aa23.46■■□□□ 1.35
SQLE-206ENST00000523430 TBC1D5Q92609 795 aa23.46■■□□□ 1.35
SQLE-206ENST00000523430 NAP1L4Q99733 375 aaKnown RBP23.46■■□□□ 1.35
SQLE-206ENST00000523430 TRIM5Q9C035 493 aa23.46■■□□□ 1.35
SQLE-206ENST00000523430 PAPPA2Q9BXP8 1791 aa23.46■■□□□ 1.35
SQLE-206ENST00000523430 CFBP00751 764 aa23.45■■□□□ 1.35
SQLE-206ENST00000523430 FOSP01100 380 aaPredicted RBP23.45■■□□□ 1.35
SQLE-206ENST00000523430 SARM1Q6SZW1 724 aa23.45■■□□□ 1.35
SQLE-206ENST00000523430 ZNF280CQ8ND82 737 aa23.45■■□□□ 1.35
SQLE-206ENST00000523430 AGBL1Q96MI9 1066 aa23.45■■□□□ 1.35
SQLE-206ENST00000523430 MBOAT7Q96N66 472 aa23.45■■□□□ 1.35
SQLE-206ENST00000523430 UIMC1Q96RL1 719 aa23.45■■□□□ 1.35
SQLE-206ENST00000523430 RPAP3Q9H6T3 665 aaPredicted RBP23.45■■□□□ 1.35
SQLE-206ENST00000523430 TTC12Q9H892 705 aaPredicted RBP23.45■■□□□ 1.35
SQLE-206ENST00000523430 AS3MTQ9HBK9 375 aa23.45■■□□□ 1.35
SQLE-206ENST00000523430 POLR2AP24928 1970 aaKnown RBP23.45■■□□□ 1.34
SQLE-206ENST00000523430 CYP3A7-CYP3A51PA0A087WV96 503 aa23.45■■□□□ 1.34
SQLE-206ENST00000523430 GTPBP6O43824 516 aaPredicted RBP23.45■■□□□ 1.34
SQLE-206ENST00000523430 ICAM1P05362 532 aa23.45■■□□□ 1.34
SQLE-206ENST00000523430 PTMAP06454 111 aaKnown RBP23.45■■□□□ 1.34
SQLE-206ENST00000523430 CYP3A7P24462 503 aa23.45■■□□□ 1.34
SQLE-206ENST00000523430 USP14P54578 494 aa23.45■■□□□ 1.34
SQLE-206ENST00000523430 BACE1P56817 501 aa23.45■■□□□ 1.34
SQLE-206ENST00000523430 SUPT20HL1Q3ZLR7 823 aa23.45■■□□□ 1.34
SQLE-206ENST00000523430 FCHSD1Q86WN1 690 aa23.45■■□□□ 1.34
SQLE-206ENST00000523430 PRPF38AQ8NAV1 312 aaKnown RBP23.45■■□□□ 1.34
SQLE-206ENST00000523430 LRWD1Q9UFC0 647 aa23.45■■□□□ 1.34
SQLE-206ENST00000523430 ZHX2Q9Y6X8 837 aa23.45■■□□□ 1.34
SQLE-206ENST00000523430 ABCB11O95342 1321 aa23.45■■□□□ 1.34
SQLE-206ENST00000523430 PARP14Q460N5 1801 aa23.44■■□□□ 1.34
SQLE-206ENST00000523430 FLOT1O75955 427 aa23.44■■□□□ 1.34
SQLE-206ENST00000523430 KCNMB3Q9NPA1 279 aa23.44■■□□□ 1.34
SQLE-206ENST00000523430 CCPG1Q9ULG6 757 aa23.44■■□□□ 1.34
SQLE-206ENST00000523430 MRPL11Q9Y3B7 192 aaKnown RBP23.44■■□□□ 1.34
SQLE-206ENST00000523430 OTOFQ9HC10 1997 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms