RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 PPATQ06203 517 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 LDLRAD1Q5T700 205 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 CKAP2LQ8IYA6 745 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 FMR1NBQ8N0W7 255 aaPredicted RBP17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 EPSTI1Q96J88 318 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 ZFP91Q96JP5 570 aaPredicted RBP17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 FAM160A1Q05DH4 1040 aa17.14■□□□□ 0.33
CSGALNACT1-211ENST00000522854 SH3D19Q5HYK7 790 aa17.14■□□□□ 0.33
CSGALNACT1-211ENST00000522854 RESP18Q5W5W9 173 aa17.14■□□□□ 0.33
CSGALNACT1-211ENST00000522854 DSG3P32926 999 aa17.13■□□□□ 0.33
CSGALNACT1-211ENST00000522854 COG2Q14746 738 aa17.13■□□□□ 0.33
CSGALNACT1-211ENST00000522854 PDILTQ8N807 584 aa17.13■□□□□ 0.33
CSGALNACT1-211ENST00000522854 RBM46Q8TBY0 533 aaKnown RBP17.13■□□□□ 0.33
CSGALNACT1-211ENST00000522854 NUP62CLQ9H1M0 184 aa17.13■□□□□ 0.33
CSGALNACT1-211ENST00000522854 LOC285556D6RIA3 1793 aa17.13■□□□□ 0.33
CSGALNACT1-211ENST00000522854 A0A0G2JLL6 359 aaPredicted RBP17.13■□□□□ 0.33
CSGALNACT1-211ENST00000522854 SPDYE16A6NNV3 312 aaPredicted RBP17.13■□□□□ 0.33
CSGALNACT1-211ENST00000522854 PP2D1A8MPX8 630 aa17.13■□□□□ 0.33
CSGALNACT1-211ENST00000522854 TMEM132BQ14DG7 1078 aa17.13■□□□□ 0.33
CSGALNACT1-211ENST00000522854 CST9Q5W186 159 aa17.13■□□□□ 0.33
CSGALNACT1-211ENST00000522854 PRRT2Q7Z6L0 340 aaPredicted RBP17.13■□□□□ 0.33
CSGALNACT1-211ENST00000522854 REPS2Q8NFH8 660 aa17.13■□□□□ 0.33
CSGALNACT1-211ENST00000522854 CLEC4DQ8WXI8 215 aa17.13■□□□□ 0.33
CSGALNACT1-211ENST00000522854 SYAP1Q96A49 352 aaPredicted RBP17.13■□□□□ 0.33
CSGALNACT1-211ENST00000522854 A0A087WWV3 80 aa17.12■□□□□ 0.33
CSGALNACT1-211ENST00000522854 A0A087X0B3 334 aa17.12■□□□□ 0.33
CSGALNACT1-211ENST00000522854 NEMFO60524 1076 aa17.12■□□□□ 0.33
CSGALNACT1-211ENST00000522854 SLC10A4Q96EP9 437 aa17.12■□□□□ 0.33
CSGALNACT1-211ENST00000522854 PURBQ96QR8 312 aaKnown RBP17.12■□□□□ 0.33
CSGALNACT1-211ENST00000522854 GBA2Q9HCG7 927 aaPredicted RBP17.12■□□□□ 0.33
CSGALNACT1-211ENST00000522854 COL20A1Q9P218 1284 aa17.12■□□□□ 0.33
CSGALNACT1-211ENST00000522854 HPSEQ9Y251 543 aa17.12■□□□□ 0.33
CSGALNACT1-211ENST00000522854 CTDP1Q9Y5B0 961 aaPredicted RBP17.12■□□□□ 0.33
CSGALNACT1-211ENST00000522854 ABCB11O95342 1321 aa17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 SPDYE3A6NKU9 549 aa17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 ZBED4O75132 1171 aa17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 ZNF202O95125 648 aa17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 MOGSQ13724 837 aa17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 PLS1Q14651 629 aa17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 SYMPKQ92797 1274 aaKnown RBP17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 TNMDQ9H2S6 317 aa17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 CLSTN2Q9H4D0 955 aa17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 ZNF214Q9UL59 606 aaPredicted RBP17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 MRPL11Q9Y3B7 192 aaKnown RBP17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 GCOM1H8Y6P7 765 aaPredicted RBP17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 ITGBL1O95965 494 aaPredicted RBP17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 POLR2MP0CAP2 368 aa17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 PPIL2Q13356 520 aa17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 SNRNP48Q6IEG0 339 aaKnown RBP17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 CYP2W1Q8TAV3 490 aa17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 KCNH3Q9ULD8 1083 aa17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 ADAMTS5Q9UNA0 930 aa17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 KCNH4Q9UQ05 1017 aa17.11■□□□□ 0.33
CSGALNACT1-211ENST00000522854 KINO60870 393 aaKnown RBP17.1■□□□□ 0.33
CSGALNACT1-211ENST00000522854 SYKP43405 635 aa17.1■□□□□ 0.33
CSGALNACT1-211ENST00000522854 ZNF445P59923 1031 aa17.1■□□□□ 0.33
CSGALNACT1-211ENST00000522854 ARHGAP4P98171 946 aa17.1■□□□□ 0.33
CSGALNACT1-211ENST00000522854 TRERF1Q96PN7 1200 aa17.1■□□□□ 0.33
CSGALNACT1-211ENST00000522854 DDX19AQ9NUU7 478 aaKnown RBP17.1■□□□□ 0.33
CSGALNACT1-211ENST00000522854 PIK3CDO00329 1044 aa17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 POLR2DO15514 142 aaKnown RBP17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 BMP15O95972 392 aa17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 TXKP42681 527 aa17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 LONRF3Q496Y0 759 aa17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 CRYGNQ8WXF5 182 aa17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 FERMT2Q96AC1 680 aa17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 GLT8D2Q9H1C3 349 aa17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 R3HDMLQ9H3Y0 253 aa17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 DDX25Q9UHL0 483 aaKnown RBP17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 FAM86B1E9PN63 330 aa17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 FOXN1O15353 648 aa17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 FAM86B2P0C5J1 330 aa17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 OR52Z1P0C646 297 aa17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 TECP42680 631 aa17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 AP3B2Q13367 1082 aa17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 SLC30A10Q6XR72 485 aa17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 BTBD7Q9P203 1132 aa17.09■□□□□ 0.33
CSGALNACT1-211ENST00000522854 CXCL11O14625 94 aa17.08■□□□□ 0.33
CSGALNACT1-211ENST00000522854 CALCRLQ16602 461 aa17.08■□□□□ 0.33
CSGALNACT1-211ENST00000522854 CHADLQ6NUI6 762 aa17.08■□□□□ 0.33
CSGALNACT1-211ENST00000522854 LRSAM1Q6UWE0 723 aa17.08■□□□□ 0.33
CSGALNACT1-211ENST00000522854 NSMFQ6X4W1 530 aa17.08■□□□□ 0.33
CSGALNACT1-211ENST00000522854 DTHD1Q6ZMT9 781 aa17.08■□□□□ 0.33
CSGALNACT1-211ENST00000522854 ZNF579Q8NAF0 562 aaKnown RBP17.08■□□□□ 0.33
CSGALNACT1-211ENST00000522854 ASCC2Q9H1I8 757 aaPredicted RBP17.08■□□□□ 0.33
CSGALNACT1-211ENST00000522854 RNF146Q9NTX7 359 aa17.08■□□□□ 0.33
CSGALNACT1-211ENST00000522854 SREBF1P36956 1147 aa17.08■□□□□ 0.32
CSGALNACT1-211ENST00000522854 RPS6P62753 249 aaKnown RBP17.08■□□□□ 0.32
CSGALNACT1-211ENST00000522854 PRR16Q569H4 304 aa17.08■□□□□ 0.32
CSGALNACT1-211ENST00000522854 GPAT2Q6NUI2 795 aa17.08■□□□□ 0.32
CSGALNACT1-211ENST00000522854 GRAMD1CQ8IYS0 662 aa17.08■□□□□ 0.32
CSGALNACT1-211ENST00000522854 C2orf69Q8N8R5 385 aa17.08■□□□□ 0.32
CSGALNACT1-211ENST00000522854 PROCA1Q8NCQ7 364 aaPredicted RBP17.08■□□□□ 0.32
CSGALNACT1-211ENST00000522854 HAS1Q92839 578 aa17.08■□□□□ 0.32
CSGALNACT1-211ENST00000522854 MTMR9Q96QG7 549 aa17.08■□□□□ 0.32
CSGALNACT1-211ENST00000522854 PLIN2Q99541 437 aa17.08■□□□□ 0.32
CSGALNACT1-211ENST00000522854 SDF4Q9BRK5 362 aa17.08■□□□□ 0.32
CSGALNACT1-211ENST00000522854 HOXC10Q9NYD6 342 aa17.08■□□□□ 0.32
CSGALNACT1-211ENST00000522854 RBBP6Q7Z6E9 1792 aaKnown RBP17.07■□□□□ 0.32
CSGALNACT1-211ENST00000522854 FAM237AA0A1B0GTK4 181 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms