RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 CCDC82Q8N4S0 544 aa20.73■□□□□ 0.91
CLK4-211ENST00000522556 MORC4Q8TE76 937 aa20.73■□□□□ 0.91
CLK4-211ENST00000522556 TAAR1Q96RJ0 339 aa20.73■□□□□ 0.91
CLK4-211ENST00000522556 MAP3K14Q99558 947 aa20.73■□□□□ 0.91
CLK4-211ENST00000522556 SPZ1Q9BXG8 430 aa20.73■□□□□ 0.91
CLK4-211ENST00000522556 ABHD16BQ9H3Z7 469 aa20.73■□□□□ 0.91
CLK4-211ENST00000522556 XPNPEP3Q9NQH7 507 aa20.73■□□□□ 0.91
CLK4-211ENST00000522556 PNMA2Q9UL42 364 aa20.73■□□□□ 0.91
CLK4-211ENST00000522556 PCDHA1Q9Y5I3 950 aa20.73■□□□□ 0.91
CLK4-211ENST00000522556 SYNRGQ9UMZ2 1314 aa20.73■□□□□ 0.91
CLK4-211ENST00000522556 KLF18A0A0U1RQI7 1052 aa20.72■□□□□ 0.91
CLK4-211ENST00000522556 ADAMTS4O75173 837 aa20.72■□□□□ 0.91
CLK4-211ENST00000522556 RARBP10826 455 aa20.72■□□□□ 0.91
CLK4-211ENST00000522556 CASTP20810 708 aaKnown RBP20.72■□□□□ 0.91
CLK4-211ENST00000522556 RPS6KB1P23443 525 aa20.72■□□□□ 0.91
CLK4-211ENST00000522556 KIF5BP33176 963 aa20.72■□□□□ 0.91
CLK4-211ENST00000522556 APOBRQ0VD83 1088 aa20.72■□□□□ 0.91
CLK4-211ENST00000522556 BLOC1S2Q6QNY1 142 aa20.72■□□□□ 0.91
CLK4-211ENST00000522556 TMTC3Q6ZXV5 915 aa20.72■□□□□ 0.91
CLK4-211ENST00000522556 TMTC2Q8N394 836 aa20.72■□□□□ 0.91
CLK4-211ENST00000522556 FANCBQ8NB91 859 aa20.72■□□□□ 0.91
CLK4-211ENST00000522556 DPF3Q92784 378 aa20.72■□□□□ 0.91
CLK4-211ENST00000522556 MRPL11Q9Y3B7 192 aaKnown RBP20.72■□□□□ 0.91
CLK4-211ENST00000522556 PNMA6FA0A0J9YX94 578 aa20.71■□□□□ 0.91
CLK4-211ENST00000522556 ASB14A6NK59 587 aa20.71■□□□□ 0.91
CLK4-211ENST00000522556 DNM1LO00429 736 aa20.71■□□□□ 0.91
CLK4-211ENST00000522556 SEC24BO95487 1268 aa20.71■□□□□ 0.91
CLK4-211ENST00000522556 CFBP00751 764 aa20.71■□□□□ 0.91
CLK4-211ENST00000522556 HOXA13P31271 388 aaPredicted RBP20.71■□□□□ 0.91
CLK4-211ENST00000522556 LRRC26Q2I0M4 334 aa20.71■□□□□ 0.91
CLK4-211ENST00000522556 TAPT1Q6NXT6 567 aa20.71■□□□□ 0.91
CLK4-211ENST00000522556 BRF1Q92994 677 aa20.71■□□□□ 0.91
CLK4-211ENST00000522556 FAM217BQ9NTX9 383 aaPredicted RBP20.71■□□□□ 0.91
CLK4-211ENST00000522556 FAM184BQ9ULE4 1060 aa20.71■□□□□ 0.91
CLK4-211ENST00000522556 CNTNAP5Q8WYK1 1306 aa20.71■□□□□ 0.91
CLK4-211ENST00000522556 EDNRBP24530 442 aa20.7■□□□□ 0.9
CLK4-211ENST00000522556 CDC27P30260 824 aa20.7■□□□□ 0.9
CLK4-211ENST00000522556 RGS22Q8NE09 1264 aa20.7■□□□□ 0.9
CLK4-211ENST00000522556 FERMT2Q96AC1 680 aa20.7■□□□□ 0.9
CLK4-211ENST00000522556 HTATIP2Q9BUP3 242 aa20.7■□□□□ 0.9
CLK4-211ENST00000522556 UPF3BQ9BZI7 483 aaKnown RBP20.7■□□□□ 0.9
CLK4-211ENST00000522556 SENP6Q9GZR1 1112 aaPredicted RBP20.7■□□□□ 0.9
CLK4-211ENST00000522556 GOLGA8AA7E2F4 631 aa20.69■□□□□ 0.9
CLK4-211ENST00000522556 GOLGA8BA8MQT2 603 aa20.69■□□□□ 0.9
CLK4-211ENST00000522556 H0YGN5 161 aa20.69■□□□□ 0.9
CLK4-211ENST00000522556 CTAGE5O15320 804 aa20.69■□□□□ 0.9
CLK4-211ENST00000522556 ZBTB43O43298 467 aa20.69■□□□□ 0.9
CLK4-211ENST00000522556 HMGB1P09429 215 aaKnown RBP20.69■□□□□ 0.9
CLK4-211ENST00000522556 CALM1P0DP23 149 aa20.69■□□□□ 0.9
CLK4-211ENST00000522556 CALM2P0DP24 149 aa20.69■□□□□ 0.9
CLK4-211ENST00000522556 CALM3P0DP25 149 aa20.69■□□□□ 0.9
CLK4-211ENST00000522556 SMPD1P17405 629 aa20.69■□□□□ 0.9
CLK4-211ENST00000522556 CAPN2P17655 700 aa20.69■□□□□ 0.9
CLK4-211ENST00000522556 HSD17B4P51659 736 aa20.69■□□□□ 0.9
CLK4-211ENST00000522556 ATN1P54259 1190 aaPredicted RBP20.69■□□□□ 0.9
CLK4-211ENST00000522556 FUT2Q10981 343 aa20.69■□□□□ 0.9
CLK4-211ENST00000522556 PRPF38BQ5VTL8 546 aaKnown RBP20.69■□□□□ 0.9
CLK4-211ENST00000522556 LARP6Q9BRS8 491 aaKnown RBP20.69■□□□□ 0.9
CLK4-211ENST00000522556 ADD3Q9UEY8 706 aaKnown RBP20.69■□□□□ 0.9
CLK4-211ENST00000522556 NAP1L2Q9ULW6 460 aaPredicted RBP20.69■□□□□ 0.9
CLK4-211ENST00000522556 KIAA1217Q5T5P2 1943 aa20.68■□□□□ 0.9
CLK4-211ENST00000522556 EPB41L2O43491 1005 aaKnown RBP20.68■□□□□ 0.9
CLK4-211ENST00000522556 GHRHRQ02643 423 aa20.68■□□□□ 0.9
CLK4-211ENST00000522556 RTN1Q16799 776 aa20.68■□□□□ 0.9
CLK4-211ENST00000522556 C7orf61Q8IZ16 206 aa20.68■□□□□ 0.9
CLK4-211ENST00000522556 IL31RAQ8NI17 732 aa20.68■□□□□ 0.9
CLK4-211ENST00000522556 RRP36Q96EU6 259 aaKnown RBP20.68■□□□□ 0.9
CLK4-211ENST00000522556 AGXT2Q9BYV1 514 aa20.68■□□□□ 0.9
CLK4-211ENST00000522556 GNEQ9Y223 722 aaKnown RBP20.68■□□□□ 0.9
CLK4-211ENST00000522556 KBTBD13C9JR72 458 aa20.67■□□□□ 0.9
CLK4-211ENST00000522556 DUSP11O75319 330 aaKnown RBP20.67■□□□□ 0.9
CLK4-211ENST00000522556 EIF2AK2P19525 551 aaKnown RBP20.67■□□□□ 0.9
CLK4-211ENST00000522556 GNAQP50148 359 aa20.67■□□□□ 0.9
CLK4-211ENST00000522556 TNFAIP2Q03169 654 aa20.67■□□□□ 0.9
CLK4-211ENST00000522556 TOB2Q14106 344 aaPredicted RBP20.67■□□□□ 0.9
CLK4-211ENST00000522556 MCF2L2Q86YR7 1114 aa20.67■□□□□ 0.9
CLK4-211ENST00000522556 ARRDC4Q8NCT1 418 aa20.67■□□□□ 0.9
CLK4-211ENST00000522556 KLHDC9Q8NEP7 349 aa20.67■□□□□ 0.9
CLK4-211ENST00000522556 DNERQ8NFT8 737 aa20.67■□□□□ 0.9
CLK4-211ENST00000522556 GPKOWQ92917 476 aaPredicted RBP eCLIP20.67■□□□□ 0.9
CLK4-211ENST00000522556 UPF3AQ9H1J1 476 aaKnown RBP20.67■□□□□ 0.9
CLK4-211ENST00000522556 ZSWIM6Q9HCJ5 1215 aa20.67■□□□□ 0.9
CLK4-211ENST00000522556 VTA1Q9NP79 307 aa20.67■□□□□ 0.9
CLK4-211ENST00000522556 DNAH12Q6ZR08 3092 aa20.67■□□□□ 0.9
CLK4-211ENST00000522556 PPFIA3O75145 1194 aa20.66■□□□□ 0.9
CLK4-211ENST00000522556 FGD1P98174 961 aa20.66■□□□□ 0.9
CLK4-211ENST00000522556 BEX3Q00994 111 aa20.66■□□□□ 0.9
CLK4-211ENST00000522556 PDE4DQ08499 809 aa20.66■□□□□ 0.9
CLK4-211ENST00000522556 CCSAPQ6IQ19 270 aaPredicted RBP20.66■□□□□ 0.9
CLK4-211ENST00000522556 SYNE3Q6ZMZ3 975 aa20.66■□□□□ 0.9
CLK4-211ENST00000522556 RUFY3Q7L099 469 aa20.66■□□□□ 0.9
CLK4-211ENST00000522556 ZFP91Q96JP5 570 aaPredicted RBP20.66■□□□□ 0.9
CLK4-211ENST00000522556 RMDN3Q96TC7 470 aa20.66■□□□□ 0.9
CLK4-211ENST00000522556 LZTS2Q9BRK4 669 aa20.66■□□□□ 0.9
CLK4-211ENST00000522556 EVI5O60447 810 aa20.65■□□□□ 0.9
CLK4-211ENST00000522556 ARIH2O95376 493 aa20.65■□□□□ 0.9
CLK4-211ENST00000522556 C6orf222P0C671 652 aaPredicted RBP20.65■□□□□ 0.9
CLK4-211ENST00000522556 PSMA5P28066 241 aa20.65■□□□□ 0.9
CLK4-211ENST00000522556 SMARCA1P28370 1054 aa20.65■□□□□ 0.9
CLK4-211ENST00000522556 ADD1P35611 737 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms