RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 MOB2Q70IA6 237 aa10.89□□□□□ -0.67
SHPRH-209ENST00000521977 ERO1BQ86YB8 467 aa10.89□□□□□ -0.67
SHPRH-209ENST00000521977 PLPP6Q8IY26 295 aa10.89□□□□□ -0.67
SHPRH-209ENST00000521977 RASGRP4Q8TDF6 673 aa10.89□□□□□ -0.67
SHPRH-209ENST00000521977 CUL5Q93034 780 aa10.89□□□□□ -0.67
SHPRH-209ENST00000521977 CLMNQ96JQ2 1002 aa10.89□□□□□ -0.67
SHPRH-209ENST00000521977 SLF1Q9BQI6 1058 aa10.89□□□□□ -0.67
SHPRH-209ENST00000521977 NMRK2Q9NPI5 230 aa10.89□□□□□ -0.67
SHPRH-209ENST00000521977 PCDHA7Q9UN72 937 aa10.89□□□□□ -0.67
SHPRH-209ENST00000521977 KCNH4Q9UQ05 1017 aa10.89□□□□□ -0.67
SHPRH-209ENST00000521977 LOC285556D6RIA3 1793 aa10.89□□□□□ -0.67
SHPRH-209ENST00000521977 ZNF536O15090 1300 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 A0A0G2JLL6 359 aaPredicted RBP10.88□□□□□ -0.67
SHPRH-209ENST00000521977 CCDC194A0A1B0GVG4 234 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 A0A1W2PQ27 194 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 A0A1W2PQ64 194 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 A0A1W2PQD8 194 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 TRAF5O00463 557 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 CXCL11O14625 94 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 MEIS2O14770 477 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 OPLAHO14841 1288 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 BMP15O95972 392 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 MRPL12P52815 198 aaKnown RBP10.88□□□□□ -0.67
SHPRH-209ENST00000521977 FKBP1BP68106 108 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 PPIL2Q13356 520 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 NONOQ15233 471 aaKnown RBP eCLIP10.88□□□□□ -0.67
SHPRH-209ENST00000521977 TTC38Q5R3I4 469 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 AXDND1Q5T1B0 1012 aaPredicted RBP10.88□□□□□ -0.67
SHPRH-209ENST00000521977 ADALQ6DHV7 355 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 MCTP2Q6DN12 878 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 CATSPERGQ6ZRH7 1159 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 PRRT2Q7Z6L0 340 aaPredicted RBP10.88□□□□□ -0.67
SHPRH-209ENST00000521977 REXO1Q8N1G1 1221 aaKnown RBP10.88□□□□□ -0.67
SHPRH-209ENST00000521977 PSTPIP2Q9H939 334 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 ELP3Q9H9T3 547 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 SLC38A10Q9HBR0 1119 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 TMOD4Q9NZQ9 345 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 ADAMTS5Q9UNA0 930 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 LHX6Q9UPM6 363 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 CEP131Q9UPN4 1083 aa10.88□□□□□ -0.67
SHPRH-209ENST00000521977 ABCB11O95342 1321 aa10.87□□□□□ -0.67
SHPRH-209ENST00000521977 MYPNQ86TC9 1320 aa10.87□□□□□ -0.67
SHPRH-209ENST00000521977 PIK3CDO00329 1044 aa10.87□□□□□ -0.67
SHPRH-209ENST00000521977 IRF6O14896 467 aa10.87□□□□□ -0.67
SHPRH-209ENST00000521977 EDIL3O43854 480 aa10.87□□□□□ -0.67
SHPRH-209ENST00000521977 ICAM1P05362 532 aa10.87□□□□□ -0.67
SHPRH-209ENST00000521977 GHRHRQ02643 423 aa10.87□□□□□ -0.67
SHPRH-209ENST00000521977 FMR1Q06787 632 aaKnown RBP eCLIP10.87□□□□□ -0.67
SHPRH-209ENST00000521977 TTLL12Q14166 644 aaPredicted RBP10.87□□□□□ -0.67
SHPRH-209ENST00000521977 USH1GQ495M9 461 aa10.87□□□□□ -0.67
SHPRH-209ENST00000521977 C4orf32Q8N8J7 132 aa10.87□□□□□ -0.67
SHPRH-209ENST00000521977 JMYQ8N9B5 988 aa10.87□□□□□ -0.67
SHPRH-209ENST00000521977 PROCA1Q8NCQ7 364 aaPredicted RBP10.87□□□□□ -0.67
SHPRH-209ENST00000521977 REPS2Q8NFH8 660 aa10.87□□□□□ -0.67
SHPRH-209ENST00000521977 TANGO6Q9C0B7 1094 aa10.87□□□□□ -0.67
SHPRH-209ENST00000521977 TMEM260Q9NX78 707 aa10.87□□□□□ -0.67
SHPRH-209ENST00000521977 BIN2Q9UBW5 565 aaPredicted RBP10.87□□□□□ -0.67
SHPRH-209ENST00000521977 SMCHD1A6NHR9 2005 aa10.87□□□□□ -0.67
SHPRH-209ENST00000521977 FAM237AA0A1B0GTK4 181 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 GOLGA6L4A6NEF3 574 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 USP17L15C9J2P7 530 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 USP17L13C9JLJ4 530 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 USP17L11C9JVI0 530 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 USP17L18D6R9N7 530 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 USP17L22D6RA61 530 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 USP17L17D6RBQ6 530 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 USP17L19D6RCP7 530 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 USP17L20D6RJB6 530 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 VWA5AO00534 786 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 CUTAO60888 179 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 FLOT1O75955 427 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 ITGBL1O95965 494 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-209ENST00000521977 LIG1P18858 919 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 PTPREP23469 700 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 HOXA7P31268 230 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-209ENST00000521977 ME1P48163 572 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 ATP2C1P98194 919 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-209ENST00000521977 USP17L24Q0WX57 530 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 AP3B2Q13367 1082 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 ORC2Q13416 577 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-209ENST00000521977 MOGSQ13724 837 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 DSG2Q14126 1118 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 COG2Q14746 738 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 UBE2SQ16763 222 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 INF2Q27J81 1249 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 JAKMIP3Q5VZ66 844 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 CCDC174Q6PII3 467 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 NEK8Q86SG6 692 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 TBCKQ8TEA7 893 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 OPTNQ96CV9 577 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 P2RX7Q99572 595 aaKnown RBP10.86□□□□□ -0.67
SHPRH-209ENST00000521977 GBA2Q9HCG7 927 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-209ENST00000521977 TMEM63CQ9P1W3 806 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 FBXO2Q9UK22 296 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-209ENST00000521977 PNMA2Q9UL42 364 aa10.86□□□□□ -0.67
SHPRH-209ENST00000521977 MRPL11Q9Y3B7 192 aaKnown RBP10.86□□□□□ -0.67
SHPRH-209ENST00000521977 SRPRBQ9Y5M8 271 aaKnown RBP10.86□□□□□ -0.67
SHPRH-209ENST00000521977 ATP2A1O14983 1001 aa10.85□□□□□ -0.67
SHPRH-209ENST00000521977 ZBED4O75132 1171 aa10.85□□□□□ -0.67
SHPRH-209ENST00000521977 TAL1P17542 331 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms