RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 CCDC172P0C7W6 258 aa14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 KCTD19Q17RG1 926 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 CREG2Q8IUH2 290 aa14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 SHISA4Q96DD7 197 aa14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 ZBTB1Q9Y2K1 713 aa14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 CCNT1O60563 726 aaKnown RBP14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 TRAPPC10P48553 1259 aa14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 IFFO1Q0D2I5 559 aa14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 STK4Q13043 487 aa14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 RAPGEF1Q13905 1077 aa14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 SUGP1Q8IWZ8 645 aaKnown RBP14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 CEP89Q96ST8 783 aa14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 CD248Q9HCU0 757 aa14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 FECHP22830 423 aa14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 LSP1P33241 339 aa14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 TECP42680 631 aa14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 TRIM28Q13263 835 aaKnown RBP14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 CAVIN4Q5BKX8 364 aa14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 TTMPQ5BVD1 217 aa14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 SOGA3Q5TF21 947 aa14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 DHTKD1Q96HY7 919 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 UIMC1Q96RL1 719 aa14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC9-208ENST00000520857 LRRC53A6NM62 1247 aa14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 A6NNZ2 444 aa14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 TXKP42681 527 aa14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 SEC23AQ15436 765 aa14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 IL17AQ16552 155 aa14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 TUBB8Q3ZCM7 444 aa14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 MMGT1Q8N4V1 131 aa14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 PROCA1Q8NCQ7 364 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 TMEM60Q9H2L4 133 aa14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 TROAPQ12815 778 aa14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 E2F5Q15329 346 aa14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 CPLX4Q7Z7G2 160 aa14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 SH2D4AQ9H788 454 aa14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 MCM9Q9NXL9 1143 aa14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 NAPAP54920 295 aa14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 LRRC41Q15345 812 aa14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 TRIM31Q9BZY9 425 aa14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 NDST4Q9H3R1 872 aa14.19□□□□□ -0.14
TRAPPC9-208ENST00000520857 RIC1Q4ADV7 1423 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 SLC1A4P43007 532 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 CCDC152Q4G0S7 254 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 HAUS3Q68CZ6 603 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 CNNM4Q6P4Q7 775 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 ARFGAP2Q8N6H7 521 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 ZNF512BQ96KM6 892 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 TSG101Q99816 390 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 PLA2G12BQ9BX93 195 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 GOPCQ9HD26 462 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 MST1RQ04912 1400 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 FRMD3A2A2Y4 597 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 GCOM1H8Y6P7 765 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 CEP104O60308 925 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 FGFR1OPO95684 399 aaKnown RBP14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 FAM153BP0C7A2 387 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 MYZAPP0CAP1 466 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 GOLGA8HP0CJ92 632 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 FAM153CQ494X1 144 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 TTI2Q6NXR4 508 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 ADGRA1Q86SQ6 560 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 TBC1D7Q9P0N9 293 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 FAM153AQ9UHL3 310 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 SMIM23A6NLE4 172 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 TRAF5O00463 557 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 KCNK3O14649 394 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 DDAH1O94760 285 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 TNNC1P63316 161 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 HDLBPQ00341 1268 aaKnown RBP14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 NAA35Q5VZE5 725 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 ARL6IP4Q66PJ3 421 aaKnown RBP14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 CCDC84Q86UT8 332 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 ZNF507Q8TCN5 953 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 CCT8L2Q96SF2 557 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 CPVLQ9H3G5 476 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 ARHGAP20Q9P2F6 1191 aa14.18□□□□□ -0.14
TRAPPC9-208ENST00000520857 SHOX2O60902 331 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 PPP1R37O75864 691 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 GLI1P08151 1106 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 CYP2D6P10635 497 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 CTNNA1P35221 906 aaKnown RBP14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 SLC9C1Q4G0N8 1177 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 BICDL1Q6ZP65 573 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 VGLL2Q8N8G2 317 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 ZNF473Q8WTR7 871 aaKnown RBP14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 CRNKL1Q9BZJ0 848 aaKnown RBP14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 KANSL2Q9H9L4 492 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 PLAAQ9Y263 795 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 CPP00450 1065 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 RCAN1P53805 252 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 TFAP4Q01664 338 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 PRPF4BQ13523 1007 aaKnown RBP14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 KIAA0753Q2KHM9 967 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 NLRP14Q86W24 1093 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 OR2W6PQ8NHA6 318 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 CCDC113Q9H0I3 377 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 TLDC2A0PJX2 215 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 ZNF263O14978 683 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 ADAMTS3O15072 1205 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms