RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 NR1I3Q14994 352 aa6.21□□□□□ -1.42
SQLE-204ENST00000520493 RCSD1Q6JBY9 416 aa6.21□□□□□ -1.42
SQLE-204ENST00000520493 KIAA1211LQ6NV74 962 aa6.21□□□□□ -1.42
SQLE-204ENST00000520493 TMEM151BQ8IW70 566 aa6.21□□□□□ -1.42
SQLE-204ENST00000520493 SIGLEC10Q96LC7 697 aa6.21□□□□□ -1.42
SQLE-204ENST00000520493 FGD4Q96M96 766 aa6.21□□□□□ -1.42
SQLE-204ENST00000520493 SGPP1Q9BX95 441 aa6.21□□□□□ -1.42
SQLE-204ENST00000520493 TNFRSF12AQ9NP84 129 aa6.21□□□□□ -1.42
SQLE-204ENST00000520493 MBD1Q9UIS9 605 aaPredicted RBP6.21□□□□□ -1.42
SQLE-204ENST00000520493 AKAP8O43823 692 aaKnown RBP6.2□□□□□ -1.42
SQLE-204ENST00000520493 ATF4P18848 351 aaPredicted RBP6.2□□□□□ -1.42
SQLE-204ENST00000520493 L1CAMP32004 1257 aa6.2□□□□□ -1.42
SQLE-204ENST00000520493 GRB10Q13322 594 aa6.2□□□□□ -1.42
SQLE-204ENST00000520493 KIR3DS1Q14943 382 aa6.2□□□□□ -1.42
SQLE-204ENST00000520493 NCAPHQ15003 741 aa6.2□□□□□ -1.42
SQLE-204ENST00000520493 TNNI3KQ59H18 835 aa6.2□□□□□ -1.42
SQLE-204ENST00000520493 BICRALQ6AI39 1079 aa6.2□□□□□ -1.42
SQLE-204ENST00000520493 POMZP3Q6PJE2 187 aa6.2□□□□□ -1.42
SQLE-204ENST00000520493 TMC6Q7Z403 805 aa6.2□□□□□ -1.42
SQLE-204ENST00000520493 ZDHHC14Q8IZN3 488 aa6.2□□□□□ -1.42
SQLE-204ENST00000520493 TMEM52Q8NDY8 209 aa6.2□□□□□ -1.42
SQLE-204ENST00000520493 KLHL6Q8WZ60 621 aa6.2□□□□□ -1.42
SQLE-204ENST00000520493 RCC1LQ96I51 464 aaKnown RBP6.2□□□□□ -1.42
SQLE-204ENST00000520493 GCM1Q9NP62 436 aa6.2□□□□□ -1.42
SQLE-204ENST00000520493 PDLIM7Q9NR12 457 aa6.2□□□□□ -1.42
SQLE-204ENST00000520493 CGGBP1Q9UFW8 167 aaPredicted RBP6.2□□□□□ -1.42
SQLE-204ENST00000520493 KCTD3Q9Y597 815 aa6.2□□□□□ -1.42
SQLE-204ENST00000520493 TRBV23OR9-2A0A075B6M9 112 aa6.19□□□□□ -1.42
SQLE-204ENST00000520493 STXBP3O00186 592 aa6.19□□□□□ -1.42
SQLE-204ENST00000520493 NOP56O00567 594 aaKnown RBP6.19□□□□□ -1.42
SQLE-204ENST00000520493 AURKAO14965 403 aa6.19□□□□□ -1.42
SQLE-204ENST00000520493 N4BP3O15049 544 aa6.19□□□□□ -1.42
SQLE-204ENST00000520493 ZNF143P52747 638 aaPredicted RBP6.19□□□□□ -1.42
SQLE-204ENST00000520493 DPY19L1Q2PZI1 675 aa6.19□□□□□ -1.42
SQLE-204ENST00000520493 CABP7Q86V35 215 aa6.19□□□□□ -1.42
SQLE-204ENST00000520493 APBA2Q99767 749 aa6.19□□□□□ -1.42
SQLE-204ENST00000520493 KLHL14Q9P2G3 628 aa6.19□□□□□ -1.42
SQLE-204ENST00000520493 BACE2Q9Y5Z0 518 aa6.19□□□□□ -1.42
SQLE-204ENST00000520493 CYBBP04839 570 aa6.18□□□□□ -1.42
SQLE-204ENST00000520493 MAPKAPK2P49137 400 aa6.18□□□□□ -1.42
SQLE-204ENST00000520493 CEBPAP49715 358 aaPredicted RBP6.18□□□□□ -1.42
SQLE-204ENST00000520493 MVKQ03426 396 aa6.18□□□□□ -1.42
SQLE-204ENST00000520493 SPATS1Q496A3 300 aa6.18□□□□□ -1.42
SQLE-204ENST00000520493 ZC3H14Q6PJT7 736 aaKnown RBP6.18□□□□□ -1.42
SQLE-204ENST00000520493 ARHGEF39Q8N4T4 335 aa6.18□□□□□ -1.42
SQLE-204ENST00000520493 FEZF2Q8TBJ5 459 aa6.18□□□□□ -1.42
SQLE-204ENST00000520493 MZB1Q8WU39 189 aa6.18□□□□□ -1.42
SQLE-204ENST00000520493 TANGO6Q9C0B7 1094 aa6.18□□□□□ -1.42
SQLE-204ENST00000520493 DBR1Q9UK59 544 aaKnown RBP6.18□□□□□ -1.42
SQLE-204ENST00000520493 AKT3Q9Y243 479 aa6.18□□□□□ -1.42
SQLE-204ENST00000520493 C2orf71A6NGG8 1288 aa6.17□□□□□ -1.42
SQLE-204ENST00000520493 SRGAP3O43295 1099 aa6.17□□□□□ -1.42
SQLE-204ENST00000520493 VAMP4O75379 141 aa6.17□□□□□ -1.42
SQLE-204ENST00000520493 ATP2B1P20020 1258 aa6.17□□□□□ -1.42
SQLE-204ENST00000520493 CANXP27824 592 aaKnown RBP6.17□□□□□ -1.42
SQLE-204ENST00000520493 ARID5AQ03989 594 aa6.17□□□□□ -1.42
SQLE-204ENST00000520493 CBX2Q14781 532 aaPredicted RBP6.17□□□□□ -1.42
SQLE-204ENST00000520493 PLEKHN1Q494U1 663 aaPredicted RBP6.17□□□□□ -1.42
SQLE-204ENST00000520493 SOGA3Q5TF21 947 aa6.17□□□□□ -1.42
SQLE-204ENST00000520493 PAQR3Q6TCH7 311 aa6.17□□□□□ -1.42
SQLE-204ENST00000520493 RPTNQ6XPR3 784 aa6.17□□□□□ -1.42
SQLE-204ENST00000520493 FAM169BQ8N8A8 192 aa6.17□□□□□ -1.42
SQLE-204ENST00000520493 PPP1R14AQ96A00 147 aa6.17□□□□□ -1.42
SQLE-204ENST00000520493 CNTD2Q9H8S5 307 aa6.17□□□□□ -1.42
SQLE-204ENST00000520493 ACTR10Q9NZ32 417 aa6.17□□□□□ -1.42
SQLE-204ENST00000520493 ADAMTS20P59510 1910 aa6.17□□□□□ -1.42
SQLE-204ENST00000520493 PFKLP17858 780 aa6.16□□□□□ -1.42
SQLE-204ENST00000520493 PAMP19021 973 aa6.16□□□□□ -1.42
SQLE-204ENST00000520493 PI3P19957 117 aa6.16□□□□□ -1.42
SQLE-204ENST00000520493 EPHB3P54753 998 aa6.16□□□□□ -1.42
SQLE-204ENST00000520493 BVESQ8NE79 360 aa6.16□□□□□ -1.42
SQLE-204ENST00000520493 NLGN2Q8NFZ4 835 aa6.16□□□□□ -1.42
SQLE-204ENST00000520493 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.16□□□□□ -1.42
SQLE-204ENST00000520493 NPHP3-ACAD11A0A0J9YXS1 232 aa6.15□□□□□ -1.42
SQLE-204ENST00000520493 SMAD7O15105 426 aaKnown RBP6.15□□□□□ -1.42
SQLE-204ENST00000520493 KCNH1O95259 989 aa6.15□□□□□ -1.42
SQLE-204ENST00000520493 DBHP09172 617 aa6.15□□□□□ -1.42
SQLE-204ENST00000520493 MSL3P1P0C860 447 aa6.15□□□□□ -1.42
SQLE-204ENST00000520493 TACR1P25103 407 aa6.15□□□□□ -1.42
SQLE-204ENST00000520493 CDR1P51861 262 aa6.15□□□□□ -1.42
SQLE-204ENST00000520493 RBL2Q08999 1139 aa6.15□□□□□ -1.42
SQLE-204ENST00000520493 SSPNQ14714 243 aa6.15□□□□□ -1.42
SQLE-204ENST00000520493 TARBP2Q15633 366 aaKnown RBP6.15□□□□□ -1.42
SQLE-204ENST00000520493 LARP1BQ659C4 914 aaKnown RBP6.15□□□□□ -1.42
SQLE-204ENST00000520493 LDHDQ86WU2 507 aa6.15□□□□□ -1.42
SQLE-204ENST00000520493 GPR20Q99678 358 aa6.15□□□□□ -1.42
SQLE-204ENST00000520493 MCMBPQ9BTE3 642 aa6.15□□□□□ -1.42
SQLE-204ENST00000520493 NUDT5Q9UKK9 219 aa6.15□□□□□ -1.42
SQLE-204ENST00000520493 MRVI1Q9Y6F6 885 aa6.15□□□□□ -1.42
SQLE-204ENST00000520493 HMGB1P09429 215 aaKnown RBP6.14□□□□□ -1.43
SQLE-204ENST00000520493 PLP2Q04941 152 aa6.14□□□□□ -1.43
SQLE-204ENST00000520493 LZTR1Q8N653 840 aa6.14□□□□□ -1.43
SQLE-204ENST00000520493 USP33Q8TEY7 942 aa6.14□□□□□ -1.43
SQLE-204ENST00000520493 APEX2Q9UBZ4 518 aa6.14□□□□□ -1.43
SQLE-204ENST00000520493 PPP1R1BQ9UD71 204 aaPredicted RBP6.14□□□□□ -1.43
SQLE-204ENST00000520493 PRKAG3Q9UGI9 489 aa6.14□□□□□ -1.43
SQLE-204ENST00000520493 SUSD2Q9UGT4 822 aa6.14□□□□□ -1.43
SQLE-204ENST00000520493 EMC9Q9Y3B6 208 aa6.14□□□□□ -1.43
SQLE-204ENST00000520493 R3HCC1Q9Y3T6 440 aaKnown RBP6.14□□□□□ -1.43
SQLE-204ENST00000520493 F8W031 263 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms