RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 AFF1P51825 1210 aaKnown RBP7.53□□□□□ -1.2
PABPC1-207ENST00000518716 TREML2Q5T2D2 321 aa7.53□□□□□ -1.2
PABPC1-207ENST00000518716 VPS37DQ86XT2 251 aa7.53□□□□□ -1.2
PABPC1-207ENST00000518716 ANKRD13CQ8N6S4 541 aa7.53□□□□□ -1.2
PABPC1-207ENST00000518716 WDR66Q8TBY9 1149 aa7.53□□□□□ -1.2
PABPC1-207ENST00000518716 NUDT8Q8WV74 236 aa7.53□□□□□ -1.2
PABPC1-207ENST00000518716 COA7Q96BR5 231 aa7.53□□□□□ -1.2
PABPC1-207ENST00000518716 BICC1Q9H694 974 aaKnown RBP7.53□□□□□ -1.2
PABPC1-207ENST00000518716 C11orf49Q9H6J7 331 aa7.53□□□□□ -1.2
PABPC1-207ENST00000518716 SALL1Q9NSC2 1324 aa7.52□□□□□ -1.2
PABPC1-207ENST00000518716 ENTPD3O75355 529 aa7.52□□□□□ -1.21
PABPC1-207ENST00000518716 PRDX5P30044 214 aa7.52□□□□□ -1.21
PABPC1-207ENST00000518716 RFX5P48382 616 aaPredicted RBP7.52□□□□□ -1.21
PABPC1-207ENST00000518716 PUM3Q15397 648 aaKnown RBP7.52□□□□□ -1.21
PABPC1-207ENST00000518716 METTL24Q5JXM2 366 aa7.52□□□□□ -1.21
PABPC1-207ENST00000518716 PRR23CQ6ZRP0 262 aa7.52□□□□□ -1.21
PABPC1-207ENST00000518716 DMRTC2Q8IXT2 367 aaPredicted RBP7.52□□□□□ -1.21
PABPC1-207ENST00000518716 TRIB2Q92519 343 aa7.52□□□□□ -1.21
PABPC1-207ENST00000518716 USP6NLQ92738 828 aa7.52□□□□□ -1.21
PABPC1-207ENST00000518716 MEGF10Q96KG7 1140 aa7.52□□□□□ -1.21
PABPC1-207ENST00000518716 UBE2OQ9C0C9 1292 aaKnown RBP7.52□□□□□ -1.21
PABPC1-207ENST00000518716 SRCIN1Q9C0H9 1055 aa7.52□□□□□ -1.21
PABPC1-207ENST00000518716 USP40Q9NVE5 1235 aa7.52□□□□□ -1.21
PABPC1-207ENST00000518716 C9orf78Q9NZ63 289 aaPredicted RBP7.52□□□□□ -1.21
PABPC1-207ENST00000518716 RNF114Q9Y508 228 aa7.52□□□□□ -1.21
PABPC1-207ENST00000518716 OAS3Q9Y6K5 1087 aaKnown RBP7.52□□□□□ -1.21
PABPC1-207ENST00000518716 AK9Q5TCS8 1911 aa7.52□□□□□ -1.21
PABPC1-207ENST00000518716 DDX60LQ5H9U9 1706 aaKnown RBP7.52□□□□□ -1.21
PABPC1-207ENST00000518716 GAKO14976 1311 aa7.52□□□□□ -1.21
PABPC1-207ENST00000518716 DDTLA6NHG4 134 aaPredicted RBP7.51□□□□□ -1.21
PABPC1-207ENST00000518716 FRAT2O75474 233 aaPredicted RBP7.51□□□□□ -1.21
PABPC1-207ENST00000518716 XRCC5P13010 732 aaKnown RBP7.51□□□□□ -1.21
PABPC1-207ENST00000518716 BRD2P25440 801 aaKnown RBP7.51□□□□□ -1.21
PABPC1-207ENST00000518716 GCLCP48506 637 aaPredicted RBP7.51□□□□□ -1.21
PABPC1-207ENST00000518716 RGS3P49796 1198 aa7.51□□□□□ -1.21
PABPC1-207ENST00000518716 EXOSC9Q06265 439 aaKnown RBP7.51□□□□□ -1.21
PABPC1-207ENST00000518716 LRRC26Q2I0M4 334 aa7.51□□□□□ -1.21
PABPC1-207ENST00000518716 CCDC184Q52MB2 194 aa7.51□□□□□ -1.21
PABPC1-207ENST00000518716 GADL1Q6ZQY3 521 aa7.51□□□□□ -1.21
PABPC1-207ENST00000518716 ATG9AQ7Z3C6 839 aa7.51□□□□□ -1.21
PABPC1-207ENST00000518716 KLHDC4Q8TBB5 520 aa7.51□□□□□ -1.21
PABPC1-207ENST00000518716 SMCR8Q8TEV9 937 aaPredicted RBP7.51□□□□□ -1.21
PABPC1-207ENST00000518716 DDX4Q9NQI0 724 aaKnown RBP7.51□□□□□ -1.21
PABPC1-207ENST00000518716 PICK1Q9NRD5 415 aa7.51□□□□□ -1.21
PABPC1-207ENST00000518716 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.51□□□□□ -1.21
PABPC1-207ENST00000518716 MORF4L1Q9UBU8 362 aa7.51□□□□□ -1.21
PABPC1-207ENST00000518716 SLC6A14Q9UN76 642 aa7.51□□□□□ -1.21
PABPC1-207ENST00000518716 TRIM75PA6NK02 468 aa7.5□□□□□ -1.21
PABPC1-207ENST00000518716 IGHA2P01877 340 aa7.5□□□□□ -1.21
PABPC1-207ENST00000518716 IFIT1P09914 478 aaKnown RBP7.5□□□□□ -1.21
PABPC1-207ENST00000518716 RRP1BQ14684 758 aaKnown RBP7.5□□□□□ -1.21
PABPC1-207ENST00000518716 CCDC84Q86UT8 332 aaPredicted RBP7.5□□□□□ -1.21
PABPC1-207ENST00000518716 WDR63Q8IWG1 891 aa7.5□□□□□ -1.21
PABPC1-207ENST00000518716 ZNF384Q8TF68 577 aa7.5□□□□□ -1.21
PABPC1-207ENST00000518716 LPIN2Q92539 896 aa7.5□□□□□ -1.21
PABPC1-207ENST00000518716 BRD7Q9NPI1 651 aa7.5□□□□□ -1.21
PABPC1-207ENST00000518716 SCHIP1Q9P0W5 487 aaPredicted RBP7.5□□□□□ -1.21
PABPC1-207ENST00000518716 NAGPAQ9UK23 515 aa7.5□□□□□ -1.21
PABPC1-207ENST00000518716 DOCK1Q14185 1865 aa7.49□□□□□ -1.21
PABPC1-207ENST00000518716 LOC285556D6RIA3 1793 aa7.49□□□□□ -1.21
PABPC1-207ENST00000518716 EYA2O00167 538 aa7.49□□□□□ -1.21
PABPC1-207ENST00000518716 MED26O95402 600 aa7.49□□□□□ -1.21
PABPC1-207ENST00000518716 LDHBP07195 334 aaKnown RBP7.49□□□□□ -1.21
PABPC1-207ENST00000518716 FSTP19883 344 aa7.49□□□□□ -1.21
PABPC1-207ENST00000518716 HOXA7P31268 230 aaPredicted RBP7.49□□□□□ -1.21
PABPC1-207ENST00000518716 RHBDL3P58872 404 aa7.49□□□□□ -1.21
PABPC1-207ENST00000518716 CACNB2Q08289 660 aaPredicted RBP7.49□□□□□ -1.21
PABPC1-207ENST00000518716 TBC1D8BQ0IIM8 1120 aa7.49□□□□□ -1.21
PABPC1-207ENST00000518716 MCM6Q14566 821 aa7.49□□□□□ -1.21
PABPC1-207ENST00000518716 TEAD4Q15561 434 aa7.49□□□□□ -1.21
PABPC1-207ENST00000518716 ZNF280CQ8ND82 737 aa7.49□□□□□ -1.21
PABPC1-207ENST00000518716 CDX2Q99626 313 aaPredicted RBP7.49□□□□□ -1.21
PABPC1-207ENST00000518716 USP44Q9H0E7 712 aa7.49□□□□□ -1.21
PABPC1-207ENST00000518716 ASCC2Q9H1I8 757 aaPredicted RBP7.49□□□□□ -1.21
PABPC1-207ENST00000518716 TXNRD2Q9NNW7 524 aa7.49□□□□□ -1.21
PABPC1-207ENST00000518716 LRRFIP2Q9Y608 721 aaKnown RBP7.49□□□□□ -1.21
PABPC1-207ENST00000518716 GPC6Q9Y625 555 aaPredicted RBP7.49□□□□□ -1.21
PABPC1-207ENST00000518716 DOCK2Q92608 1830 aa7.49□□□□□ -1.21
PABPC1-207ENST00000518716 GPR75-ASB3A0A0A6YYF3 556 aa7.48□□□□□ -1.21
PABPC1-207ENST00000518716 PEX10O60683 326 aa7.48□□□□□ -1.21
PABPC1-207ENST00000518716 SLC5A1P13866 664 aa7.48□□□□□ -1.21
PABPC1-207ENST00000518716 NOS2P35228 1153 aa7.48□□□□□ -1.21
PABPC1-207ENST00000518716 SPP2Q13103 211 aa7.48□□□□□ -1.21
PABPC1-207ENST00000518716 MYO9BQ13459 2157 aa7.48□□□□□ -1.21
PABPC1-207ENST00000518716 SH3PXD2AQ5TCZ1 1133 aa7.48□□□□□ -1.21
PABPC1-207ENST00000518716 SLC4A10Q6U841 1118 aa7.48□□□□□ -1.21
PABPC1-207ENST00000518716 BANK1Q8NDB2 785 aa7.48□□□□□ -1.21
PABPC1-207ENST00000518716 BHMTQ93088 406 aa7.48□□□□□ -1.21
PABPC1-207ENST00000518716 OSBPL5Q9H0X9 879 aaPredicted RBP7.48□□□□□ -1.21
PABPC1-207ENST00000518716 TTYH1Q9H313 450 aaPredicted RBP7.48□□□□□ -1.21
PABPC1-207ENST00000518716 NEUROD4Q9HD90 331 aa7.48□□□□□ -1.21
PABPC1-207ENST00000518716 SNRKQ9NRH2 765 aa7.48□□□□□ -1.21
PABPC1-207ENST00000518716 RBPJLQ9UBG7 517 aa7.48□□□□□ -1.21
PABPC1-207ENST00000518716 MYH2Q9UKX2 1941 aa7.48□□□□□ -1.21
PABPC1-207ENST00000518716 PDS5AQ29RF7 1337 aaKnown RBP7.48□□□□□ -1.21
PABPC1-207ENST00000518716 DNAH12Q6ZR08 3092 aa7.48□□□□□ -1.21
PABPC1-207ENST00000518716 PIEZO1Q92508 2521 aa7.47□□□□□ -1.21
PABPC1-207ENST00000518716 BDP1A6H8Y1 2624 aa7.47□□□□□ -1.21
PABPC1-207ENST00000518716 CIAO1O76071 339 aa7.47□□□□□ -1.21
PABPC1-207ENST00000518716 CYP2B6P20813 491 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms