RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 USP17L6PQ6QN14 398 aa12.09□□□□□ -0.47
PABPC1-203ENST00000517921 POTEEQ6S8J3 1075 aa12.09□□□□□ -0.47
PABPC1-203ENST00000517921 RASAL3Q86YV0 1011 aa12.09□□□□□ -0.47
PABPC1-203ENST00000517921 LINC00301Q8NCQ3 95 aa12.09□□□□□ -0.47
PABPC1-203ENST00000517921 SPATA32Q96LK8 384 aa12.09□□□□□ -0.47
PABPC1-203ENST00000517921 ASCC2Q9H1I8 757 aaPredicted RBP12.09□□□□□ -0.47
PABPC1-203ENST00000517921 PNMA2Q9UL42 364 aa12.09□□□□□ -0.47
PABPC1-203ENST00000517921 ZNF214Q9UL59 606 aaPredicted RBP12.09□□□□□ -0.47
PABPC1-203ENST00000517921 MRPL11Q9Y3B7 192 aaKnown RBP12.09□□□□□ -0.47
PABPC1-203ENST00000517921 PCDHB6Q9Y5E3 794 aa12.09□□□□□ -0.47
PABPC1-203ENST00000517921 PIK3CDO00329 1044 aa12.08□□□□□ -0.48
PABPC1-203ENST00000517921 ATP2A1O14983 1001 aa12.08□□□□□ -0.48
PABPC1-203ENST00000517921 CA12O43570 354 aa12.08□□□□□ -0.48
PABPC1-203ENST00000517921 GADD45BO75293 160 aaPredicted RBP12.08□□□□□ -0.48
PABPC1-203ENST00000517921 CETPP11597 493 aa12.08□□□□□ -0.48
PABPC1-203ENST00000517921 IRX3P78415 501 aaPredicted RBP12.08□□□□□ -0.48
PABPC1-203ENST00000517921 AP3B2Q13367 1082 aa12.08□□□□□ -0.48
PABPC1-203ENST00000517921 TMEM132BQ14DG7 1078 aa12.08□□□□□ -0.48
PABPC1-203ENST00000517921 STK38Q15208 465 aa12.08□□□□□ -0.48
PABPC1-203ENST00000517921 NONOQ15233 471 aaKnown RBP eCLIP12.08□□□□□ -0.482e-6■■■□□ 15.9
PABPC1-203ENST00000517921 SF3A1Q15459 793 aaKnown RBP12.08□□□□□ -0.48
PABPC1-203ENST00000517921 INF2Q27J81 1249 aa12.08□□□□□ -0.48
PABPC1-203ENST00000517921 TTC38Q5R3I4 469 aa12.08□□□□□ -0.48
PABPC1-203ENST00000517921 LBX2Q6XYB7 198 aa12.08□□□□□ -0.48
PABPC1-203ENST00000517921 TEX2Q8IWB9 1127 aa12.08□□□□□ -0.48
PABPC1-203ENST00000517921 CPXCR1Q8N123 301 aa12.08□□□□□ -0.48
PABPC1-203ENST00000517921 CLEC4DQ8WXI8 215 aa12.08□□□□□ -0.48
PABPC1-203ENST00000517921 BRI3BPQ8WY22 251 aa12.08□□□□□ -0.48
PABPC1-203ENST00000517921 PGBD1Q96JS3 809 aa12.08□□□□□ -0.48
PABPC1-203ENST00000517921 P2RX7Q99572 595 aaKnown RBP12.08□□□□□ -0.48
PABPC1-203ENST00000517921 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.08□□□□□ -0.48
PABPC1-203ENST00000517921 HOXC10Q9NYD6 342 aa12.08□□□□□ -0.48
PABPC1-203ENST00000517921 CTDP1Q9Y5B0 961 aaPredicted RBP12.08□□□□□ -0.48
PABPC1-203ENST00000517921 CCL15-CCL14A0A0B4J2E2 113 aa12.07□□□□□ -0.48
PABPC1-203ENST00000517921 NFIBO00712 420 aa12.07□□□□□ -0.48
PABPC1-203ENST00000517921 ALAS1P13196 640 aa12.07□□□□□ -0.48
PABPC1-203ENST00000517921 ATP2B1P20020 1258 aa12.07□□□□□ -0.48
PABPC1-203ENST00000517921 OSBPP22059 807 aa12.07□□□□□ -0.48
PABPC1-203ENST00000517921 HERVK_113P62684 666 aa12.07□□□□□ -0.48
PABPC1-203ENST00000517921 GHRHRQ02643 423 aa12.07□□□□□ -0.48
PABPC1-203ENST00000517921 PABPC4Q13310 644 aaKnown RBP eCLIP12.07□□□□□ -0.481e-323■■■■□ 22
PABPC1-203ENST00000517921 SLC39A14Q15043 492 aa12.07□□□□□ -0.48
PABPC1-203ENST00000517921 CCL15Q16663 113 aa12.07□□□□□ -0.48
PABPC1-203ENST00000517921 MUM1L1Q5H9M0 696 aa12.07□□□□□ -0.48
PABPC1-203ENST00000517921 SNRNP48Q6IEG0 339 aaKnown RBP12.07□□□□□ -0.48
PABPC1-203ENST00000517921 MB21D1Q8N884 522 aa12.07□□□□□ -0.48
PABPC1-203ENST00000517921 KCNG4Q8TDN1 519 aa12.07□□□□□ -0.48
PABPC1-203ENST00000517921 TBCKQ8TEA7 893 aa12.07□□□□□ -0.48
PABPC1-203ENST00000517921 TBC1D5Q92609 795 aa12.07□□□□□ -0.48
PABPC1-203ENST00000517921 ANO3Q9BYT9 981 aa12.07□□□□□ -0.48
PABPC1-203ENST00000517921 RIPK3Q9Y572 518 aa12.07□□□□□ -0.48
PABPC1-203ENST00000517921 MORC2Q9Y6X9 1032 aaPredicted RBP12.07□□□□□ -0.48
PABPC1-203ENST00000517921 BTBD19C9JJ37 291 aa12.06□□□□□ -0.48
PABPC1-203ENST00000517921 GCOM1H8Y6P7 765 aaPredicted RBP12.06□□□□□ -0.48
PABPC1-203ENST00000517921 SPTLC2O15270 562 aa12.06□□□□□ -0.48
PABPC1-203ENST00000517921 EDIL3O43854 480 aa12.06□□□□□ -0.48
PABPC1-203ENST00000517921 CNMDO75829 334 aa12.06□□□□□ -0.48
PABPC1-203ENST00000517921 CFBP00751 764 aa12.06□□□□□ -0.48
PABPC1-203ENST00000517921 SLC10A3P09131 477 aa12.06□□□□□ -0.48
PABPC1-203ENST00000517921 POLR2MP0CAP2 368 aa12.06□□□□□ -0.48
PABPC1-203ENST00000517921 HSD17B4P51659 736 aa12.06□□□□□ -0.48
PABPC1-203ENST00000517921 UBE2HP62256 183 aa12.06□□□□□ -0.48
PABPC1-203ENST00000517921 NEK8Q86SG6 692 aa12.06□□□□□ -0.48
PABPC1-203ENST00000517921 TEX13BQ9BXU2 312 aa12.06□□□□□ -0.48
PABPC1-203ENST00000517921 HOMER2Q9NSB8 354 aa12.06□□□□□ -0.48
PABPC1-203ENST00000517921 RNF146Q9NTX7 359 aa12.06□□□□□ -0.48
PABPC1-203ENST00000517921 BTBD7Q9P203 1132 aa12.06□□□□□ -0.48
PABPC1-203ENST00000517921 TSKSQ9UJT2 592 aa12.06□□□□□ -0.48
PABPC1-203ENST00000517921 CEP131Q9UPN4 1083 aa12.06□□□□□ -0.48
PABPC1-203ENST00000517921 SLC45A1Q9Y2W3 748 aa12.06□□□□□ -0.48
PABPC1-203ENST00000517921 ZNF236Q9UL36 1845 aa12.05□□□□□ -0.48
PABPC1-203ENST00000517921 TESPA1A2RU30 521 aaPredicted RBP12.05□□□□□ -0.48
PABPC1-203ENST00000517921 PEX10O60683 326 aa12.05□□□□□ -0.48
PABPC1-203ENST00000517921 PPP6R2O75170 966 aa12.05□□□□□ -0.48
PABPC1-203ENST00000517921 BMP15O95972 392 aa12.05□□□□□ -0.48
PABPC1-203ENST00000517921 FOSP01100 380 aaPredicted RBP12.05□□□□□ -0.48
PABPC1-203ENST00000517921 MARCKSP29966 332 aaPredicted RBP12.05□□□□□ -0.48
PABPC1-203ENST00000517921 HOXA13P31271 388 aaPredicted RBP12.05□□□□□ -0.48
PABPC1-203ENST00000517921 STAT3P40763 770 aa12.05□□□□□ -0.48
PABPC1-203ENST00000517921 ZNF174Q15697 407 aa12.05□□□□□ -0.48
PABPC1-203ENST00000517921 TKFCQ3LXA3 575 aa12.05□□□□□ -0.48
PABPC1-203ENST00000517921 MCTP2Q6DN12 878 aa12.05□□□□□ -0.48
PABPC1-203ENST00000517921 ANKRD23Q86SG2 305 aa12.05□□□□□ -0.48
PABPC1-203ENST00000517921 MCF2L2Q86YR7 1114 aa12.05□□□□□ -0.48
PABPC1-203ENST00000517921 FAM43AQ8N2R8 423 aa12.05□□□□□ -0.48
PABPC1-203ENST00000517921 GPT2Q8TD30 523 aa12.05□□□□□ -0.48
PABPC1-203ENST00000517921 CRYGNQ8WXF5 182 aa12.05□□□□□ -0.48
PABPC1-203ENST00000517921 TRERF1Q96PN7 1200 aa12.05□□□□□ -0.48
PABPC1-203ENST00000517921 ZIC5Q96T25 663 aa12.05□□□□□ -0.48
PABPC1-203ENST00000517921 PNMA3Q9UL41 463 aa12.05□□□□□ -0.48
PABPC1-203ENST00000517921 PCDHA7Q9UN72 937 aa12.05□□□□□ -0.48
PABPC1-203ENST00000517921 LOXHD1Q8IVV2 1947 aa12.04□□□□□ -0.48
PABPC1-203ENST00000517921 SPDYE3A6NKU9 549 aa12.04□□□□□ -0.48
PABPC1-203ENST00000517921 FAM155AB1AL88 458 aaPredicted RBP12.04□□□□□ -0.48
PABPC1-203ENST00000517921 PDHXO00330 501 aa12.04□□□□□ -0.48
PABPC1-203ENST00000517921 MCM7P33993 719 aa12.04□□□□□ -0.48
PABPC1-203ENST00000517921 SREBF1P36956 1147 aa12.04□□□□□ -0.48
PABPC1-203ENST00000517921 ME1P48163 572 aa12.04□□□□□ -0.48
PABPC1-203ENST00000517921 ATP2C1P98194 919 aaPredicted RBP12.04□□□□□ -0.48
PABPC1-203ENST00000517921 ORC2Q13416 577 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms