RNA–Protein interactions for RNA: ENST00000517323.2

TRPS1-206, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 5

Gene TRPS1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-206ENST00000517323 NSMFQ6X4W1 530 aa17.71■□□□□ 0.43
TRPS1-206ENST00000517323 RNF146Q9NTX7 359 aa17.71■□□□□ 0.43
TRPS1-206ENST00000517323 HOXC10Q9NYD6 342 aa17.71■□□□□ 0.43
TRPS1-206ENST00000517323 PCDHA7Q9UN72 937 aa17.71■□□□□ 0.43
TRPS1-206ENST00000517323 DDX11L8A8MPP1 907 aa17.7■□□□□ 0.42
TRPS1-206ENST00000517323 GOLGA6L22H0YM25 854 aa17.7■□□□□ 0.42
TRPS1-206ENST00000517323 CCNT1O60563 726 aaKnown RBP17.7■□□□□ 0.42
TRPS1-206ENST00000517323 NASPP49321 788 aaPredicted RBP17.7■□□□□ 0.42
TRPS1-206ENST00000517323 CYP4F22Q6NT55 531 aa17.7■□□□□ 0.42
TRPS1-206ENST00000517323 FASTKD5Q7L8L6 764 aaKnown RBP17.7■□□□□ 0.42
TRPS1-206ENST00000517323 GZF1Q9H116 711 aaPredicted RBP17.7■□□□□ 0.42
TRPS1-206ENST00000517323 TMEM60Q9H2L4 133 aa17.7■□□□□ 0.42
TRPS1-206ENST00000517323 RBPJLQ9UBG7 517 aa17.7■□□□□ 0.42
TRPS1-206ENST00000517323 RCOR1Q9UKL0 485 aa17.7■□□□□ 0.42
TRPS1-206ENST00000517323 IGF2BP3O00425 579 aaKnown RBP eCLIP17.7■□□□□ 0.42
TRPS1-206ENST00000517323 GTF2A2P52657 109 aa17.7■□□□□ 0.42
TRPS1-206ENST00000517323 GALNT17Q6IS24 598 aa17.7■□□□□ 0.42
TRPS1-206ENST00000517323 LBX2Q6XYB7 198 aa17.7■□□□□ 0.42
TRPS1-206ENST00000517323 RGS22Q8NE09 1264 aa17.7■□□□□ 0.42
TRPS1-206ENST00000517323 ANO3Q9BYT9 981 aa17.7■□□□□ 0.42
TRPS1-206ENST00000517323 SCAND2PQ9GZW5 306 aaPredicted RBP17.7■□□□□ 0.42
TRPS1-206ENST00000517323 TLL2Q9Y6L7 1015 aa17.7■□□□□ 0.42
TRPS1-206ENST00000517323 SPTLC2O15270 562 aa17.69■□□□□ 0.42
TRPS1-206ENST00000517323 SLC37A4O43826 429 aa17.69■□□□□ 0.42
TRPS1-206ENST00000517323 CETPP11597 493 aa17.69■□□□□ 0.42
TRPS1-206ENST00000517323 STAT3P40763 770 aa17.69■□□□□ 0.42
TRPS1-206ENST00000517323 CYP2W1Q8TAV3 490 aa17.69■□□□□ 0.42
TRPS1-206ENST00000517323 BICD2Q8TD16 824 aa17.69■□□□□ 0.42
TRPS1-206ENST00000517323 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.69■□□□□ 0.42
TRPS1-206ENST00000517323 MRPL11Q9Y3B7 192 aaKnown RBP17.69■□□□□ 0.42
TRPS1-206ENST00000517323 ABCB11O95342 1321 aa17.69■□□□□ 0.42
TRPS1-206ENST00000517323 RBBP6Q7Z6E9 1792 aaKnown RBP17.69■□□□□ 0.42
TRPS1-206ENST00000517323 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.69■□□□□ 0.42
TRPS1-206ENST00000517323 TMEM88BA6NKF7 163 aa17.69■□□□□ 0.42
TRPS1-206ENST00000517323 FAM155AB1AL88 458 aaPredicted RBP17.69■□□□□ 0.42
TRPS1-206ENST00000517323 TRAK2O60296 914 aa17.69■□□□□ 0.42
TRPS1-206ENST00000517323 PTGDRQ13258 359 aa17.69■□□□□ 0.42
TRPS1-206ENST00000517323 SLC39A14Q15043 492 aa17.69■□□□□ 0.42
TRPS1-206ENST00000517323 KRT25Q7Z3Z0 450 aa17.69■□□□□ 0.42
TRPS1-206ENST00000517323 TMEM87AQ8NBN3 555 aa17.69■□□□□ 0.42
TRPS1-206ENST00000517323 LCTP09848 1927 aa17.69■□□□□ 0.42
TRPS1-206ENST00000517323 ZBTB48P10074 688 aaPredicted RBP17.68■□□□□ 0.42
TRPS1-206ENST00000517323 LIG1P18858 919 aa17.68■□□□□ 0.42
TRPS1-206ENST00000517323 RPS6P62753 249 aaKnown RBP17.68■□□□□ 0.42
TRPS1-206ENST00000517323 IL17AQ16552 155 aa17.68■□□□□ 0.42
TRPS1-206ENST00000517323 POTEDQ86YR6 584 aa17.68■□□□□ 0.42
TRPS1-206ENST00000517323 ANKRD13CQ8N6S4 541 aa17.68■□□□□ 0.42
TRPS1-206ENST00000517323 IL31RAQ8NI17 732 aa17.68■□□□□ 0.42
TRPS1-206ENST00000517323 TEX13BQ9BXU2 312 aa17.68■□□□□ 0.42
TRPS1-206ENST00000517323 GOLPH3LQ9H4A5 285 aa17.68■□□□□ 0.42
TRPS1-206ENST00000517323 NOL7Q9UMY1 257 aaKnown RBP17.68■□□□□ 0.42
TRPS1-206ENST00000517323 GCOM1H8Y6P7 765 aaPredicted RBP17.67■□□□□ 0.42
TRPS1-206ENST00000517323 POLR2MP0CAP2 368 aa17.67■□□□□ 0.42
TRPS1-206ENST00000517323 USP49Q70CQ1 688 aa17.67■□□□□ 0.42
TRPS1-206ENST00000517323 NEK8Q86SG6 692 aa17.67■□□□□ 0.42
TRPS1-206ENST00000517323 SMCR8Q8TEV9 937 aaPredicted RBP17.67■□□□□ 0.42
TRPS1-206ENST00000517323 BAATQ14032 418 aaPredicted RBP17.67■□□□□ 0.42
TRPS1-206ENST00000517323 NCAPG2Q86XI2 1143 aa17.67■□□□□ 0.42
TRPS1-206ENST00000517323 MOV10L1Q9BXT6 1211 aaKnown RBP17.67■□□□□ 0.42
TRPS1-206ENST00000517323 SPATC1LQ9H0A9 340 aa17.67■□□□□ 0.42
TRPS1-206ENST00000517323 UNCXA6NJT0 531 aa17.66■□□□□ 0.42
TRPS1-206ENST00000517323 SPDYE3A6NKU9 549 aa17.66■□□□□ 0.42
TRPS1-206ENST00000517323 AOC2O75106 756 aa17.66■□□□□ 0.42
TRPS1-206ENST00000517323 SLC10A3P09131 477 aa17.66■□□□□ 0.42
TRPS1-206ENST00000517323 CDC25AP30304 524 aa17.66■□□□□ 0.42
TRPS1-206ENST00000517323 AXDND1Q5T1B0 1012 aaPredicted RBP17.66■□□□□ 0.42
TRPS1-206ENST00000517323 WDR78Q5VTH9 848 aa17.66■□□□□ 0.42
TRPS1-206ENST00000517323 TAAR1Q96RJ0 339 aa17.66■□□□□ 0.42
TRPS1-206ENST00000517323 PORCNQ9H237 461 aa17.66■□□□□ 0.42
TRPS1-206ENST00000517323 A0A1B0GVL5 298 aa17.66■□□□□ 0.42
TRPS1-206ENST00000517323 YEATS4O95619 227 aa17.66■□□□□ 0.42
TRPS1-206ENST00000517323 C4orf32Q8N8J7 132 aa17.66■□□□□ 0.42
TRPS1-206ENST00000517323 A1CFQ9NQ94 594 aaKnown RBP17.66■□□□□ 0.42
TRPS1-206ENST00000517323 DNAH12Q6ZR08 3092 aa17.66■□□□□ 0.42
TRPS1-206ENST00000517323 VWA3AA6NCI4 1184 aa17.65■□□□□ 0.42
TRPS1-206ENST00000517323 FAM86B1E9PN63 330 aa17.65■□□□□ 0.42
TRPS1-206ENST00000517323 FAM86B2P0C5J1 330 aa17.65■□□□□ 0.42
TRPS1-206ENST00000517323 ERCC3P19447 782 aa17.65■□□□□ 0.42
TRPS1-206ENST00000517323 EIF2AK2P19525 551 aaKnown RBP17.65■□□□□ 0.42
TRPS1-206ENST00000517323 OSBPP22059 807 aa17.65■□□□□ 0.42
TRPS1-206ENST00000517323 HSD17B4P51659 736 aa17.65■□□□□ 0.42
TRPS1-206ENST00000517323 ARHGAP4P98171 946 aa17.65■□□□□ 0.42
TRPS1-206ENST00000517323 FSTL1Q12841 308 aa17.65■□□□□ 0.42
TRPS1-206ENST00000517323 RNF207Q6ZRF8 634 aa17.65■□□□□ 0.42
TRPS1-206ENST00000517323 SYTL5Q8TDW5 730 aaPredicted RBP17.65■□□□□ 0.42
TRPS1-206ENST00000517323 FBXO2Q9UK22 296 aaPredicted RBP17.65■□□□□ 0.42
TRPS1-206ENST00000517323 ELP1O95163 1332 aa17.65■□□□□ 0.42
TRPS1-206ENST00000517323 PIK3CDO00329 1044 aa17.64■□□□□ 0.42
TRPS1-206ENST00000517323 UBE2HP62256 183 aa17.64■□□□□ 0.42
TRPS1-206ENST00000517323 CNTN2Q02246 1040 aa17.64■□□□□ 0.42
TRPS1-206ENST00000517323 CAVIN1Q6NZI2 390 aaKnown RBP17.64■□□□□ 0.42
TRPS1-206ENST00000517323 SHC4Q6S5L8 630 aa17.64■□□□□ 0.42
TRPS1-206ENST00000517323 PANK2Q9BZ23 570 aa17.64■□□□□ 0.42
TRPS1-206ENST00000517323 EFCC1Q9HA90 598 aa17.64■□□□□ 0.42
TRPS1-206ENST00000517323 MYPNQ86TC9 1320 aa17.64■□□□□ 0.42
TRPS1-206ENST00000517323 GOLGA6L4A6NEF3 574 aa17.64■□□□□ 0.41
TRPS1-206ENST00000517323 PP2D1A8MPX8 630 aa17.64■□□□□ 0.41
TRPS1-206ENST00000517323 PGK2P07205 417 aa17.64■□□□□ 0.41
TRPS1-206ENST00000517323 CRYGNQ8WXF5 182 aa17.64■□□□□ 0.41
TRPS1-206ENST00000517323 CPA4Q9UI42 421 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms