RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 NUF2Q9BZD4 464 aa17.54■□□□□ 0.4
TRIM41-207ENST00000515223 SEPT9Q9UHD8 586 aaPredicted RBP17.54■□□□□ 0.4
TRIM41-207ENST00000515223 RABGAP1Q9Y3P9 1069 aa17.54■□□□□ 0.4
TRIM41-207ENST00000515223 CEP85LQ5SZL2 805 aa17.53■□□□□ 0.4
TRIM41-207ENST00000515223 PDLIM2Q96JY6 352 aa17.53■□□□□ 0.4
TRIM41-207ENST00000515223 ZMYM6O95789 1325 aa17.53■□□□□ 0.4
TRIM41-207ENST00000515223 PSDA5PKW4 1024 aaPredicted RBP17.53■□□□□ 0.4
TRIM41-207ENST00000515223 TTLL1O95922 423 aa17.53■□□□□ 0.4
TRIM41-207ENST00000515223 LONRF2Q1L5Z9 754 aa17.53■□□□□ 0.4
TRIM41-207ENST00000515223 LRCH2Q5VUJ6 765 aa17.53■□□□□ 0.4
TRIM41-207ENST00000515223 ARHGAP24Q8N264 748 aa17.53■□□□□ 0.4
TRIM41-207ENST00000515223 PPM1KQ8N3J5 372 aa17.53■□□□□ 0.4
TRIM41-207ENST00000515223 DHX36Q9H2U1 1008 aaKnown RBP17.53■□□□□ 0.4
TRIM41-207ENST00000515223 ASAP1Q9ULH1 1129 aa17.53■□□□□ 0.4
TRIM41-207ENST00000515223 SPICE1Q8N0Z3 855 aa17.53■□□□□ 0.4
TRIM41-207ENST00000515223 CMTR1Q8N1G2 835 aaKnown RBP17.53■□□□□ 0.4
TRIM41-207ENST00000515223 DBNDD1Q9H9R9 158 aa17.53■□□□□ 0.4
TRIM41-207ENST00000515223 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.53■□□□□ 0.4
TRIM41-207ENST00000515223 BPIFB4P59827 614 aa17.53■□□□□ 0.4
TRIM41-207ENST00000515223 IPO11Q9UI26 975 aaKnown RBP17.53■□□□□ 0.4
TRIM41-207ENST00000515223 HNRNPDLO14979 420 aaKnown RBP17.52■□□□□ 0.4
TRIM41-207ENST00000515223 HSPD1P10809 573 aaKnown RBP17.52■□□□□ 0.4
TRIM41-207ENST00000515223 ABCB4P21439 1286 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 PPP2R5EQ16537 467 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 LRRC24Q50LG9 513 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 RTKN2Q8IZC4 609 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 CCDC51Q96ER9 411 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 ATF5Q9Y2D1 282 aaPredicted RBP17.52■□□□□ 0.4
TRIM41-207ENST00000515223 EFCAB8A8MWE9 144 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 INO80B-WBP1J3KQ70 363 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 FAM26FQ5R3K3 315 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 ZNF449Q6P9G9 518 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 NME8Q8N427 588 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 GRK7Q8WTQ7 553 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 SLC10A4Q96EP9 437 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 INO80BQ9C086 356 aaPredicted RBP17.52■□□□□ 0.4
TRIM41-207ENST00000515223 PLEKHA4Q9H4M7 779 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 CIAPIN1Q6FI81 312 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 MIS18BP1Q6P0N0 1132 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 MCUR1Q96AQ8 359 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 VCX3BQ9H321 246 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 PLCB1Q9NQ66 1216 aa17.52■□□□□ 0.4
TRIM41-207ENST00000515223 ODR4Q5SWX8 454 aa17.52■□□□□ 0.39
TRIM41-207ENST00000515223 MAP7D3Q8IWC1 876 aa17.52■□□□□ 0.39
TRIM41-207ENST00000515223 GPKOWQ92917 476 aaPredicted RBP eCLIP17.52■□□□□ 0.397e-8■□□□□ 10.5
TRIM41-207ENST00000515223 ZBTB1Q9Y2K1 713 aa17.52■□□□□ 0.39
TRIM41-207ENST00000515223 PHBP35232 272 aa17.52■□□□□ 0.39
TRIM41-207ENST00000515223 KRT12Q99456 494 aa17.52■□□□□ 0.39
TRIM41-207ENST00000515223 MED23Q9ULK4 1368 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 WDR11Q9BZH6 1224 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 PNMA3Q9UL41 463 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 PHKA1P46020 1223 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 CYP4A11Q02928 519 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 SEPT14Q6ZU15 432 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 VSIG1Q86XK7 387 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 IFT122Q9HBG6 1241 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 DISC1Q9NRI5 854 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 SOS2Q07890 1332 aaPredicted RBP17.51■□□□□ 0.39
TRIM41-207ENST00000515223 ATP10DQ9P241 1426 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 RAD17O75943 681 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 PIK3CAP42336 1068 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 ANKRD36BP1Q96IX9 119 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 SERPINB13Q9UIV8 391 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 ABCA8O94911 1581 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 A6NJR5 290 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 NDUFAB1O14561 156 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 FGAP02671 866 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 ZNF131P52739 623 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 Q3C1V9 767 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 CACNA2D3Q8IZS8 1091 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 OR8K1Q8NGG5 319 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 ZNF577Q9BSK1 485 aa17.51■□□□□ 0.39
TRIM41-207ENST00000515223 B4GALNT4Q76KP1 1039 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 CIAO1O76071 339 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 PTK2Q05397 1052 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 PROSER3Q2NL68 480 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 KRT10P13645 584 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 PDIA3P30101 505 aaKnown RBP17.5■□□□□ 0.39
TRIM41-207ENST00000515223 ABCD1P33897 745 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 ADD1P35611 737 aaKnown RBP17.5■□□□□ 0.39
TRIM41-207ENST00000515223 NSFP46459 744 aaKnown RBP17.5■□□□□ 0.39
TRIM41-207ENST00000515223 ATP11AP98196 1134 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 ADAM9Q13443 819 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 NAA30Q147X3 362 aaPredicted RBP17.5■□□□□ 0.39
TRIM41-207ENST00000515223 SLC12A6Q9UHW9 1150 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 ANKRD20A3Q5VUR7 823 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 TTLL6Q8N841 843 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.5■□□□□ 0.39
TRIM41-207ENST00000515223 SKA2Q8WVK7 121 aaPredicted RBP17.5■□□□□ 0.39
TRIM41-207ENST00000515223 VCXQ9H320 206 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 SEPT10Q9P0V9 454 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 KCNJ18B7U540 433 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 LONP1P36776 959 aaKnown RBP17.5■□□□□ 0.39
TRIM41-207ENST00000515223 KCNJ12Q14500 433 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 RINT1Q6NUQ1 792 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 PPP4R1Q8TF05 950 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 NCAPGQ9BPX3 1015 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 SNX25Q9H3E2 840 aa17.5■□□□□ 0.39
TRIM41-207ENST00000515223 HMGB1P1B2RPK0 211 aaPredicted RBP17.49■□□□□ 0.39
TRIM41-207ENST00000515223 BMP3P12645 472 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms