RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 CCDC39Q9UFE4 941 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 PCDHA5Q9Y5H7 936 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 VWA3AA6NCI4 1184 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 GOLGA6L19H0YKK7 550 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 SMC2O95347 1197 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 GDF11O95390 407 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 FOSP01100 380 aaPredicted RBP11.57□□□□□ -0.56
SNF8-214ENST00000515174 TPM3P06753 285 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 CDC25BP30305 580 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 AP3B2Q13367 1082 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 PDIA5Q14554 519 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 QRICH1Q2TAL8 776 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 SYDE2Q5VT97 1194 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 USP49Q70CQ1 688 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 LUZP1Q86V48 1076 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 FAM160B2Q86V87 743 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 DHX40Q8IX18 779 aaKnown RBP11.57□□□□□ -0.56
SNF8-214ENST00000515174 MLKLQ8NB16 471 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 RASGRP4Q8TDF6 673 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 TBCKQ8TEA7 893 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 COA7Q96BR5 231 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 EPSTI1Q96J88 318 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 GSDMAQ96QA5 445 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 MTMR9Q96QG7 549 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 DEFB129Q9H1M3 183 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 VCPKMTQ9H867 229 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 PSTPIP2Q9H939 334 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 MAGEF1Q9HAY2 307 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 SERTAD1Q9UHV2 236 aa11.57□□□□□ -0.56
SNF8-214ENST00000515174 CYP3A7-CYP3A51PA0A087WV96 503 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 BECN2A8MW95 431 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 PIK3CDO00329 1044 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 EDIL3O43854 480 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 CTNND1O60716 968 aaKnown RBP11.56□□□□□ -0.56
SNF8-214ENST00000515174 OR52Z1P0C646 297 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 CYP3A7P24462 503 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 SLC16A2P36021 539 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 TXLNAP40222 546 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 FXR2P51116 673 aaKnown RBP eCLIP11.56□□□□□ -0.56
SNF8-214ENST00000515174 MORC3Q14149 939 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 SHROOM1Q2M3G4 852 aaPredicted RBP11.56□□□□□ -0.56
SNF8-214ENST00000515174 SPECC1Q5M775 1068 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 C11orf57Q6ZUT1 292 aaPredicted RBP11.56□□□□□ -0.56
SNF8-214ENST00000515174 PLA2G4DQ86XP0 818 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 APOBEC3FQ8IUX4 373 aaKnown RBP11.56□□□□□ -0.56
SNF8-214ENST00000515174 ZC3H15Q8WU90 426 aaKnown RBP11.56□□□□□ -0.56
SNF8-214ENST00000515174 PAGE5Q96GU1 130 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 MBOAT7Q96N66 472 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 GTPBP4Q9BZE4 634 aaKnown RBP11.56□□□□□ -0.56
SNF8-214ENST00000515174 TMEM60Q9H2L4 133 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 DACH1Q9UI36 760 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 ZNF112Q9UJU3 913 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 PCDHA1Q9Y5I3 950 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 PPP2R3BQ9Y5P8 575 aa11.56□□□□□ -0.56
SNF8-214ENST00000515174 LOC285556D6RIA3 1793 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 A0A087X0B3 334 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 TMEM232C9JQI7 657 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 ADM5C9JUS6 153 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 AP5Z1O43299 807 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 NEMFO60524 1076 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 HOXA7P31268 230 aaPredicted RBP11.55□□□□□ -0.56
SNF8-214ENST00000515174 PNOCQ13519 176 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 CDC37Q16543 378 aaPredicted RBP11.55□□□□□ -0.56
SNF8-214ENST00000515174 DPCR1Q3MIW9 517 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 PDXDC2PQ6P474 469 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 ZSCAN30Q86W11 494 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 FBXO11Q86XK2 927 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 SAMD3Q8N6K7 520 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 IGSF22Q8N9C0 903 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 CRYGNQ8WXF5 182 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 LPAR1Q92633 364 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 SMARCE1Q969G3 411 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 MRFAP1L1Q96HT8 127 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 ZIC5Q96T25 663 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 BIN2Q9UBW5 565 aaPredicted RBP11.55□□□□□ -0.56
SNF8-214ENST00000515174 FEM1BQ9UK73 627 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 PNMA2Q9UL42 364 aa11.55□□□□□ -0.56
SNF8-214ENST00000515174 RBBP6Q7Z6E9 1792 aaKnown RBP11.54□□□□□ -0.56
SNF8-214ENST00000515174 ESPNB1AK53 854 aa11.54□□□□□ -0.56
SNF8-214ENST00000515174 GTPBP6O43824 516 aaPredicted RBP11.54□□□□□ -0.56
SNF8-214ENST00000515174 CCNT1O60563 726 aaKnown RBP11.54□□□□□ -0.56
SNF8-214ENST00000515174 TRPA1O75762 1119 aa11.54□□□□□ -0.56
SNF8-214ENST00000515174 FDX1P10109 184 aa11.54□□□□□ -0.56
SNF8-214ENST00000515174 ERCC5P28715 1186 aaPredicted RBP11.54□□□□□ -0.56
SNF8-214ENST00000515174 UBA7P41226 1012 aa11.54□□□□□ -0.56
SNF8-214ENST00000515174 STAT2P52630 851 aa11.54□□□□□ -0.56
SNF8-214ENST00000515174 TPM4P67936 248 aa11.54□□□□□ -0.56
SNF8-214ENST00000515174 DPYDQ12882 1025 aa11.54□□□□□ -0.56
SNF8-214ENST00000515174 NCAPHQ15003 741 aa11.54□□□□□ -0.56
SNF8-214ENST00000515174 LETM2Q2VYF4 491 aa11.54□□□□□ -0.56
SNF8-214ENST00000515174 JAKMIP3Q5VZ66 844 aa11.54□□□□□ -0.56
SNF8-214ENST00000515174 DCAF15Q66K64 600 aa11.54□□□□□ -0.56
SNF8-214ENST00000515174 RGMBQ6NW40 437 aa11.54□□□□□ -0.56
SNF8-214ENST00000515174 C2orf69Q8N8R5 385 aa11.54□□□□□ -0.56
SNF8-214ENST00000515174 ACER1Q8TDN7 264 aa11.54□□□□□ -0.56
SNF8-214ENST00000515174 KIAA1683Q9H0B3 1180 aa11.54□□□□□ -0.56
SNF8-214ENST00000515174 RANBP17Q9H2T7 1088 aaKnown RBP11.54□□□□□ -0.56
SNF8-214ENST00000515174 MAN1B1Q9UKM7 699 aa11.54□□□□□ -0.56
SNF8-214ENST00000515174 PRR12Q9ULL5 1215 aa11.54□□□□□ -0.56
SNF8-214ENST00000515174 PITPNM2Q9BZ72 1349 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms