RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 SHC4Q6S5L8 630 aa18.16■□□□□ 0.5
NUP54-214ENST00000514307 MOXD1Q6UVY6 613 aa18.16■□□□□ 0.5
NUP54-214ENST00000514307 CPXCR1Q8N123 301 aa18.16■□□□□ 0.5
NUP54-214ENST00000514307 OTUD5Q96G74 571 aa18.16■□□□□ 0.5
NUP54-214ENST00000514307 CLIC6Q96NY7 704 aa18.16■□□□□ 0.5
NUP54-214ENST00000514307 USP25Q9UHP3 1055 aa18.16■□□□□ 0.5
NUP54-214ENST00000514307 KCNH3Q9ULD8 1083 aa18.16■□□□□ 0.5
NUP54-214ENST00000514307 WDR90Q96KV7 1748 aa18.15■□□□□ 0.5
NUP54-214ENST00000514307 NEMFO60524 1076 aa18.15■□□□□ 0.5
NUP54-214ENST00000514307 CFBP00751 764 aa18.15■□□□□ 0.5
NUP54-214ENST00000514307 PFKFB1P16118 471 aa18.15■□□□□ 0.5
NUP54-214ENST00000514307 TXLNAP40222 546 aa18.15■□□□□ 0.5
NUP54-214ENST00000514307 LRSAM1Q6UWE0 723 aa18.15■□□□□ 0.5
NUP54-214ENST00000514307 ELOA2Q8IYF1 753 aaPredicted RBP18.15■□□□□ 0.5
NUP54-214ENST00000514307 MB21D1Q8N884 522 aa18.15■□□□□ 0.5
NUP54-214ENST00000514307 AK8Q96MA6 479 aa18.15■□□□□ 0.5
NUP54-214ENST00000514307 AGBL1Q96MI9 1066 aa18.15■□□□□ 0.5
NUP54-214ENST00000514307 ANO3Q9BYT9 981 aa18.15■□□□□ 0.5
NUP54-214ENST00000514307 RAB34Q9BZG1 259 aa18.15■□□□□ 0.5
NUP54-214ENST00000514307 CSRNP2Q9H175 543 aa18.15■□□□□ 0.5
NUP54-214ENST00000514307 RAVER2Q9HCJ3 691 aaKnown RBP18.15■□□□□ 0.5
NUP54-214ENST00000514307 KCNH4Q9UQ05 1017 aa18.15■□□□□ 0.5
NUP54-214ENST00000514307 CYP3A7-CYP3A51PA0A087WV96 503 aa18.14■□□□□ 0.49
NUP54-214ENST00000514307 A0A0G2JLL6 359 aaPredicted RBP18.14■□□□□ 0.49
NUP54-214ENST00000514307 SYCE3A1L190 88 aa18.14■□□□□ 0.49
NUP54-214ENST00000514307 VWA3AA6NCI4 1184 aa18.14■□□□□ 0.49
NUP54-214ENST00000514307 IRF6O14896 467 aa18.14■□□□□ 0.49
NUP54-214ENST00000514307 ATP2A1O14983 1001 aa18.14■□□□□ 0.49
NUP54-214ENST00000514307 OR52Z1P0C646 297 aa18.14■□□□□ 0.49
NUP54-214ENST00000514307 ALAS1P13196 640 aa18.14■□□□□ 0.49
NUP54-214ENST00000514307 OSBPP22059 807 aa18.14■□□□□ 0.49
NUP54-214ENST00000514307 CYP3A7P24462 503 aa18.14■□□□□ 0.49
NUP54-214ENST00000514307 SNAPC2Q13487 334 aa18.14■□□□□ 0.49
NUP54-214ENST00000514307 GADL1Q6ZQY3 521 aa18.14■□□□□ 0.49
NUP54-214ENST00000514307 PRRT2Q7Z6L0 340 aaPredicted RBP18.14■□□□□ 0.49
NUP54-214ENST00000514307 OPTNQ96CV9 577 aa18.14■□□□□ 0.49
NUP54-214ENST00000514307 CLMNQ96JQ2 1002 aa18.14■□□□□ 0.49
NUP54-214ENST00000514307 GOLPH3LQ9H4A5 285 aa18.14■□□□□ 0.49
NUP54-214ENST00000514307 ZNF408Q9H9D4 720 aa18.14■□□□□ 0.49
NUP54-214ENST00000514307 GBA2Q9HCG7 927 aaPredicted RBP18.14■□□□□ 0.49
NUP54-214ENST00000514307 HPSEQ9Y251 543 aa18.14■□□□□ 0.49
NUP54-214ENST00000514307 BAZ2BQ9UIF8 2168 aaKnown RBP18.13■□□□□ 0.49
NUP54-214ENST00000514307 CYP3A4P08684 503 aa18.13■□□□□ 0.49
NUP54-214ENST00000514307 ZNF76P36508 570 aa18.13■□□□□ 0.49
NUP54-214ENST00000514307 PDIA5Q14554 519 aa18.13■□□□□ 0.49
NUP54-214ENST00000514307 ZRSR1Q15695 479 aaKnown RBP18.13■□□□□ 0.49
NUP54-214ENST00000514307 CAMK4Q16566 473 aa18.13■□□□□ 0.49
NUP54-214ENST00000514307 CALCRLQ16602 461 aa18.13■□□□□ 0.49
NUP54-214ENST00000514307 TMEM266Q2M3C6 531 aa18.13■□□□□ 0.49
NUP54-214ENST00000514307 L1TD1Q5T7N2 865 aaKnown RBP18.13■□□□□ 0.49
NUP54-214ENST00000514307 CHADLQ6NUI6 762 aa18.13■□□□□ 0.49
NUP54-214ENST00000514307 SASS6Q6UVJ0 657 aa18.13■□□□□ 0.49
NUP54-214ENST00000514307 MOB2Q70IA6 237 aa18.13■□□□□ 0.49
NUP54-214ENST00000514307 ATG4CQ96DT6 458 aa18.13■□□□□ 0.49
NUP54-214ENST00000514307 NMRK2Q9NPI5 230 aa18.13■□□□□ 0.49
NUP54-214ENST00000514307 DDX25Q9UHL0 483 aaKnown RBP18.13■□□□□ 0.49
NUP54-214ENST00000514307 ZNF536O15090 1300 aa18.13■□□□□ 0.49
NUP54-214ENST00000514307 MYH6P13533 1939 aa18.13■□□□□ 0.49
NUP54-214ENST00000514307 TRAF5O00463 557 aa18.12■□□□□ 0.49
NUP54-214ENST00000514307 POTEIP0CG38 1075 aa18.12■□□□□ 0.49
NUP54-214ENST00000514307 POTEJP0CG39 1038 aa18.12■□□□□ 0.49
NUP54-214ENST00000514307 CCDC192P0DO97 292 aa18.12■□□□□ 0.49
NUP54-214ENST00000514307 SREBF1P36956 1147 aa18.12■□□□□ 0.49
NUP54-214ENST00000514307 UBA7P41226 1012 aa18.12■□□□□ 0.49
NUP54-214ENST00000514307 IRX3P78415 501 aaPredicted RBP18.12■□□□□ 0.49
NUP54-214ENST00000514307 ARHGAP4P98171 946 aa18.12■□□□□ 0.49
NUP54-214ENST00000514307 DGKZQ13574 1117 aa18.12■□□□□ 0.49
NUP54-214ENST00000514307 FCHSD1Q86WN1 690 aa18.12■□□□□ 0.49
NUP54-214ENST00000514307 TRERF1Q96PN7 1200 aa18.12■□□□□ 0.49
NUP54-214ENST00000514307 TSPY26PQ9H489 355 aa18.12■□□□□ 0.49
NUP54-214ENST00000514307 CCDC39Q9UFE4 941 aa18.12■□□□□ 0.49
NUP54-214ENST00000514307 OPLAHO14841 1288 aa18.11■□□□□ 0.49
NUP54-214ENST00000514307 TBX3O15119 743 aa18.11■□□□□ 0.49
NUP54-214ENST00000514307 HOXA13P31271 388 aaPredicted RBP18.11■□□□□ 0.49
NUP54-214ENST00000514307 STAT3P40763 770 aa18.11■□□□□ 0.49
NUP54-214ENST00000514307 HSD17B4P51659 736 aa18.11■□□□□ 0.49
NUP54-214ENST00000514307 GHRHRQ02643 423 aa18.11■□□□□ 0.49
NUP54-214ENST00000514307 SLFN12Q8IYM2 578 aa18.11■□□□□ 0.49
NUP54-214ENST00000514307 IQUBQ8NA54 791 aa18.11■□□□□ 0.49
NUP54-214ENST00000514307 CNNM3Q8NE01 707 aa18.11■□□□□ 0.49
NUP54-214ENST00000514307 MTMR9Q96QG7 549 aa18.11■□□□□ 0.49
NUP54-214ENST00000514307 TEX13BQ9BXU2 312 aa18.11■□□□□ 0.49
NUP54-214ENST00000514307 AGTPBP1Q9UPW5 1226 aa18.11■□□□□ 0.49
NUP54-214ENST00000514307 STK24Q9Y6E0 443 aa18.11■□□□□ 0.49
NUP54-214ENST00000514307 WNT7AO00755 349 aa18.1■□□□□ 0.49
NUP54-214ENST00000514307 CELF2O95319 508 aaKnown RBP18.1■□□□□ 0.49
NUP54-214ENST00000514307 CAVIN2O95810 425 aa18.1■□□□□ 0.49
NUP54-214ENST00000514307 CETPP11597 493 aa18.1■□□□□ 0.49
NUP54-214ENST00000514307 CIITAP33076 1130 aa18.1■□□□□ 0.49
NUP54-214ENST00000514307 GTF2A2P52657 109 aa18.1■□□□□ 0.49
NUP54-214ENST00000514307 Q4G0T1 1027 aa18.1■□□□□ 0.49
NUP54-214ENST00000514307 RBM43Q6ZSC3 357 aaKnown RBP18.1■□□□□ 0.49
NUP54-214ENST00000514307 CNKSR2Q8WXI2 1034 aa18.1■□□□□ 0.49
NUP54-214ENST00000514307 CLEC4DQ8WXI8 215 aa18.1■□□□□ 0.49
NUP54-214ENST00000514307 FAM20AQ96MK3 541 aa18.1■□□□□ 0.49
NUP54-214ENST00000514307 MBOAT7Q96N66 472 aa18.1■□□□□ 0.49
NUP54-214ENST00000514307 TMEM60Q9H2L4 133 aa18.1■□□□□ 0.49
NUP54-214ENST00000514307 FBXO40Q9UH90 709 aa18.1■□□□□ 0.49
NUP54-214ENST00000514307 POLR2DO15514 142 aaKnown RBP18.09■□□□□ 0.49
NUP54-214ENST00000514307 COPB2P35606 906 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms