RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-208ENST00000514232 MBD6Q96DN6 1003 aa3.55□□□□□ -1.84
SMARCAD1-208ENST00000514232 LCORQ96JN0 433 aaPredicted RBP3.55□□□□□ -1.84
SMARCAD1-208ENST00000514232 ASCC2Q9H1I8 757 aaPredicted RBP3.55□□□□□ -1.84
SMARCAD1-208ENST00000514232 ZBTB7CA1YPR0 619 aa3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 MINDY4BA8MYZ0 360 aa3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 SORBS3O60504 671 aa3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 LMNB1P20700 586 aa3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 LIG3P49916 1009 aa3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 PDE4BQ07343 736 aa3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 CACNB2Q08289 660 aaPredicted RBP3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 PRKD1Q15139 912 aaPredicted RBP3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 PRR31Q5SQ13 230 aa3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 TMC4Q7Z404 712 aa3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 GIPC2Q8TF65 315 aa3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 TSPAN17Q96FV3 270 aa3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 GORASP1Q9BQQ3 440 aa3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 BCL2L13Q9BXK5 485 aa3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 CSRNP2Q9H175 543 aa3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 MEGF9Q9H1U4 602 aa3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 BCAS3Q9H6U6 928 aa3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 VTI1BQ9UEU0 232 aa3.54□□□□□ -1.84
SMARCAD1-208ENST00000514232 USP31Q70CQ4 1352 aa3.53□□□□□ -1.84
SMARCAD1-208ENST00000514232 C9orf118A6NHY6 69 aa3.53□□□□□ -1.84
SMARCAD1-208ENST00000514232 U2SURPO15042 1029 aaKnown RBP3.53□□□□□ -1.84
SMARCAD1-208ENST00000514232 TFE3P19532 575 aaPredicted RBP3.53□□□□□ -1.84
SMARCAD1-208ENST00000514232 PPP2CBP62714 309 aa3.53□□□□□ -1.84
SMARCAD1-208ENST00000514232 PPP2CAP67775 309 aa3.53□□□□□ -1.84
SMARCAD1-208ENST00000514232 TRIM26Q12899 539 aaPredicted RBP3.53□□□□□ -1.84
SMARCAD1-208ENST00000514232 USP39Q53GS9 565 aaKnown RBP3.53□□□□□ -1.84
SMARCAD1-208ENST00000514232 COLEC12Q5KU26 742 aa3.53□□□□□ -1.84
SMARCAD1-208ENST00000514232 TMCO4Q5TGY1 634 aa3.53□□□□□ -1.84
SMARCAD1-208ENST00000514232 SLFN13Q68D06 897 aa3.53□□□□□ -1.84
SMARCAD1-208ENST00000514232 PKN3Q6P5Z2 889 aa3.53□□□□□ -1.84
SMARCAD1-208ENST00000514232 SLFN12Q8IYM2 578 aa3.53□□□□□ -1.84
SMARCAD1-208ENST00000514232 FAM13CQ8NE31 585 aa3.53□□□□□ -1.84
SMARCAD1-208ENST00000514232 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
SMARCAD1-208ENST00000514232 MRS2Q9HD23 443 aa3.53□□□□□ -1.84
SMARCAD1-208ENST00000514232 ZNF205O95201 554 aa3.52□□□□□ -1.85
SMARCAD1-208ENST00000514232 PF4P02776 101 aa3.52□□□□□ -1.85
SMARCAD1-208ENST00000514232 GBP2P32456 591 aaPredicted RBP3.52□□□□□ -1.85
SMARCAD1-208ENST00000514232 ADRA1BP35368 520 aa3.52□□□□□ -1.85
SMARCAD1-208ENST00000514232 FAM160A1Q05DH4 1040 aa3.52□□□□□ -1.85
SMARCAD1-208ENST00000514232 ZNF362Q5T0B9 420 aaPredicted RBP3.52□□□□□ -1.85
SMARCAD1-208ENST00000514232 FNDC7Q5VTL7 733 aa3.52□□□□□ -1.85
SMARCAD1-208ENST00000514232 BNC2Q6ZN30 1099 aaPredicted RBP3.52□□□□□ -1.85
SMARCAD1-208ENST00000514232 AGMOQ6ZNB7 445 aa3.52□□□□□ -1.85
SMARCAD1-208ENST00000514232 ZNF627Q7L945 461 aa3.52□□□□□ -1.85
SMARCAD1-208ENST00000514232 RELL1Q8IUW5 271 aa3.52□□□□□ -1.85
SMARCAD1-208ENST00000514232 DDX11Q96FC9 970 aa3.52□□□□□ -1.85
SMARCAD1-208ENST00000514232 C11orf84Q9BUA3 381 aaPredicted RBP3.52□□□□□ -1.85
SMARCAD1-208ENST00000514232 COPRSQ9NQ92 184 aa3.52□□□□□ -1.85
SMARCAD1-208ENST00000514232 PRAMEF1O95521 474 aa3.51□□□□□ -1.85
SMARCAD1-208ENST00000514232 KRT4P19013 534 aa3.51□□□□□ -1.85
SMARCAD1-208ENST00000514232 ENDOUP21128 410 aaKnown RBP3.51□□□□□ -1.85
SMARCAD1-208ENST00000514232 MFAP1P55081 439 aaKnown RBP3.51□□□□□ -1.85
SMARCAD1-208ENST00000514232 SNW1Q13573 536 aaKnown RBP3.51□□□□□ -1.85
SMARCAD1-208ENST00000514232 ZNF326Q5BKZ1 582 aaKnown RBP3.51□□□□□ -1.85
SMARCAD1-208ENST00000514232 TMEM201Q5SNT2 666 aa3.51□□□□□ -1.85
SMARCAD1-208ENST00000514232 BICRALQ6AI39 1079 aa3.51□□□□□ -1.85
SMARCAD1-208ENST00000514232 Q6ZPA2 131 aa3.51□□□□□ -1.85
SMARCAD1-208ENST00000514232 EXTL1Q92935 676 aa3.51□□□□□ -1.85
SMARCAD1-208ENST00000514232 SYT3Q9BQG1 590 aa3.51□□□□□ -1.85
SMARCAD1-208ENST00000514232 MIR1-1HGQ9H1L0 117 aa3.51□□□□□ -1.85
SMARCAD1-208ENST00000514232 CORINQ9Y5Q5 1042 aa3.51□□□□□ -1.85
SMARCAD1-208ENST00000514232 TLR3O15455 904 aaKnown RBP3.5□□□□□ -1.85
SMARCAD1-208ENST00000514232 C8BP07358 591 aa3.5□□□□□ -1.85
SMARCAD1-208ENST00000514232 ERCC3P19447 782 aa3.5□□□□□ -1.85
SMARCAD1-208ENST00000514232 BMP5P22003 454 aa3.5□□□□□ -1.85
SMARCAD1-208ENST00000514232 TNNI2P48788 182 aa3.5□□□□□ -1.85
SMARCAD1-208ENST00000514232 YARSP54577 528 aaKnown RBP3.5□□□□□ -1.85
SMARCAD1-208ENST00000514232 RPS26P62854 115 aaKnown RBP3.5□□□□□ -1.85
SMARCAD1-208ENST00000514232 POU4F1Q01851 419 aa3.5□□□□□ -1.85
SMARCAD1-208ENST00000514232 CAMK2GQ13555 558 aaPredicted RBP3.5□□□□□ -1.85
SMARCAD1-208ENST00000514232 EPHA10Q5JZY3 1008 aa3.5□□□□□ -1.85
SMARCAD1-208ENST00000514232 PHC3Q8NDX5 983 aa3.5□□□□□ -1.85
SMARCAD1-208ENST00000514232 PDLIM7Q9NR12 457 aa3.5□□□□□ -1.85
SMARCAD1-208ENST00000514232 MINPP1Q9UNW1 487 aa3.5□□□□□ -1.85
SMARCAD1-208ENST00000514232 DDX3XO00571 662 aaKnown RBP eCLIP3.49□□□□□ -1.85
SMARCAD1-208ENST00000514232 F13A1P00488 732 aa3.49□□□□□ -1.85
SMARCAD1-208ENST00000514232 ZNF16P17020 682 aaPredicted RBP3.49□□□□□ -1.85
SMARCAD1-208ENST00000514232 ST13P50502 369 aaKnown RBP3.49□□□□□ -1.85
SMARCAD1-208ENST00000514232 C21orf58P58505 322 aa3.49□□□□□ -1.85
SMARCAD1-208ENST00000514232 TSNAXIP1Q2TAA8 658 aa3.49□□□□□ -1.85
SMARCAD1-208ENST00000514232 ARHGEF18Q6ZSZ5 1173 aa3.49□□□□□ -1.85
SMARCAD1-208ENST00000514232 KYQ8NBH2 561 aa3.49□□□□□ -1.85
SMARCAD1-208ENST00000514232 GOLM1Q8NBJ4 401 aa3.49□□□□□ -1.85
SMARCAD1-208ENST00000514232 TMEM87AQ8NBN3 555 aa3.49□□□□□ -1.85
SMARCAD1-208ENST00000514232 FBXO27Q8NI29 283 aa3.49□□□□□ -1.85
SMARCAD1-208ENST00000514232 CACTINQ8WUQ7 758 aaKnown RBP3.49□□□□□ -1.85
SMARCAD1-208ENST00000514232 NOC4LQ9BVI4 516 aaKnown RBP3.49□□□□□ -1.85
SMARCAD1-208ENST00000514232 CDADC1Q9BWV3 514 aa3.49□□□□□ -1.85
SMARCAD1-208ENST00000514232 KBTBD4Q9NVX7 518 aa3.49□□□□□ -1.85
SMARCAD1-208ENST00000514232 SIGLEC6O43699 453 aa3.48□□□□□ -1.85
SMARCAD1-208ENST00000514232 C1SP09871 688 aa3.48□□□□□ -1.85
SMARCAD1-208ENST00000514232 GLI4P10075 376 aa3.48□□□□□ -1.85
SMARCAD1-208ENST00000514232 PLCG1P19174 1290 aa3.48□□□□□ -1.85
SMARCAD1-208ENST00000514232 RPL6Q02878 288 aaKnown RBP3.48□□□□□ -1.85
SMARCAD1-208ENST00000514232 NBPF9Q3BBW0 867 aa3.48□□□□□ -1.85
SMARCAD1-208ENST00000514232 FBXL19Q6PCT2 694 aa3.48□□□□□ -1.85
SMARCAD1-208ENST00000514232 PHACTR4Q8IZ21 702 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms