RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 CCL15Q16663 113 aa11.4□□□□□ -0.58
PDGFRA-209ENST00000512143 INF2Q27J81 1249 aa11.4□□□□□ -0.58
PDGFRA-209ENST00000512143 TKFCQ3LXA3 575 aa11.4□□□□□ -0.58
PDGFRA-209ENST00000512143 MUM1L1Q5H9M0 696 aa11.4□□□□□ -0.58
PDGFRA-209ENST00000512143 TTC38Q5R3I4 469 aa11.4□□□□□ -0.58
PDGFRA-209ENST00000512143 SAMD1Q6SPF0 538 aaPredicted RBP11.4□□□□□ -0.58
PDGFRA-209ENST00000512143 CPXCR1Q8N123 301 aa11.4□□□□□ -0.58
PDGFRA-209ENST00000512143 C4orf32Q8N8J7 132 aa11.4□□□□□ -0.58
PDGFRA-209ENST00000512143 PGBD1Q96JS3 809 aa11.4□□□□□ -0.58
PDGFRA-209ENST00000512143 SPATA32Q96LK8 384 aa11.4□□□□□ -0.58
PDGFRA-209ENST00000512143 TEX13BQ9BXU2 312 aa11.4□□□□□ -0.58
PDGFRA-209ENST00000512143 MAP3K20Q9NYL2 800 aaKnown RBP11.4□□□□□ -0.58
PDGFRA-209ENST00000512143 BTBD7Q9P203 1132 aa11.4□□□□□ -0.58
PDGFRA-209ENST00000512143 RBPJLQ9UBG7 517 aa11.4□□□□□ -0.58
PDGFRA-209ENST00000512143 NOL7Q9UMY1 257 aaKnown RBP11.4□□□□□ -0.58
PDGFRA-209ENST00000512143 MYH7BA7E2Y1 1941 aa11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 TMEM88BA6NKF7 163 aa11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 GCOM1H8Y6P7 765 aaPredicted RBP11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 NFIBO00712 420 aa11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 SPTLC2O15270 562 aa11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 POLR2MP0CAP2 368 aa11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 YY1P25490 414 aa11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 ZNF157P51786 506 aaPredicted RBP11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 IRX3P78415 501 aaPredicted RBP11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 ORC2Q13416 577 aaPredicted RBP11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 AXDND1Q5T1B0 1012 aaPredicted RBP11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 NEK8Q86SG6 692 aa11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 MCF2L2Q86YR7 1114 aa11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 FAM43AQ8N2R8 423 aa11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 KCNG4Q8TDN1 519 aa11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 TBCKQ8TEA7 893 aa11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 TRERF1Q96PN7 1200 aa11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 RNF39Q9H2S5 420 aa11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 RABGAP1Q9Y3P9 1069 aa11.39□□□□□ -0.59
PDGFRA-209ENST00000512143 CYP3A7-CYP3A51PA0A087WV96 503 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 PDHXO00330 501 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 BMP15O95972 392 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 ALAS1P13196 640 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 ATP2B1P20020 1258 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 PTPREP23469 700 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 CYP3A7P24462 503 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 HOXA13P31271 388 aaPredicted RBP11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 SREBF1P36956 1147 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 USP11P51784 963 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 UBE2HP62256 183 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 ATP2C1P98194 919 aaPredicted RBP11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 MKRN3Q13064 507 aaKnown RBP11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 STK38Q15208 465 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 ZNF174Q15697 407 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 ADALQ6DHV7 355 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 SNRNP48Q6IEG0 339 aaKnown RBP11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 PPP4R3AQ6IN85 833 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 RIOX2Q8IUF8 465 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 GPT2Q8TD30 523 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 GTF3C2Q8WUA4 911 aaPredicted RBP11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 CCDC102AQ96A19 550 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 MBOAT7Q96N66 472 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 ANO3Q9BYT9 981 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 SPATC1LQ9H0A9 340 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 TXNRD2Q9NNW7 524 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 ZCCHC17Q9NP64 241 aaKnown RBP11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 RNF146Q9NTX7 359 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 COL20A1Q9P218 1284 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 FBXO2Q9UK22 296 aaPredicted RBP11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 PNMA3Q9UL41 463 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 PCDHA7Q9UN72 937 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 CEP131Q9UPN4 1083 aa11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 CTDP1Q9Y5B0 961 aaPredicted RBP11.38□□□□□ -0.59
PDGFRA-209ENST00000512143 RPTORQ8N122 1335 aa11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 A0A1W2PQ27 194 aa11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 A0A1W2PQ64 194 aa11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 A0A1W2PQD8 194 aa11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 MANSC4A6NHS7 340 aaPredicted RBP11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 TRAK2O60296 914 aa11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 PEX10O60683 326 aa11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 CFBP00751 764 aa11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 CYP3A4P08684 503 aa11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 CYP2C8P10632 490 aa11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 CIITAP33076 1130 aa11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 CACNB1Q02641 598 aaPredicted RBP11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 PTGDRQ13258 359 aa11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 Q3C1V9 767 aa11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 MOXD1Q6UVY6 613 aa11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 CHST13Q8NET6 341 aa11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 SYTL5Q8TDW5 730 aaPredicted RBP11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 MOV10L1Q9BXT6 1211 aaKnown RBP11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 SRPRBQ9Y5M8 271 aaKnown RBP11.37□□□□□ -0.59
PDGFRA-209ENST00000512143 FRMPD4Q14CM0 1322 aa11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 RBBP6Q7Z6E9 1792 aaKnown RBP11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 FAM237AA0A1B0GTK4 181 aa11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 SPDYE3A6NKU9 549 aa11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 MARCKSP29966 332 aaPredicted RBP11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 ME1P48163 572 aa11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 INHBEP58166 350 aa11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 RPS6P62753 249 aaKnown RBP11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 ARHGAP4P98171 946 aa11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 IL17AQ16552 155 aa11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 KLHL40Q2TBA0 621 aa11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 SKOR2Q2VWA4 1001 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms