RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 LAIR2Q6ISS4 152 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 PAXIP1Q6ZW49 1069 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 CYB5R4Q7L1T6 521 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 SUGP2Q8IX01 1082 aaKnown RBP eCLIP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 NOA1Q8NC60 698 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 GLIS3Q8NEA6 775 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 PLEKHO2Q8TD55 490 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 HHIPQ96QV1 700 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 GORASP1Q9BQQ3 440 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 PDZD7Q9H5P4 517 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 ATP8A2Q9NTI2 1148 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 CCDC39Q9UFE4 941 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 LAS1LQ9Y4W2 734 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 PHF3Q92576 2039 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 GTF3C1Q12789 2109 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 A0A1B0GUL7 405 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 ABLIM1O14639 778 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 WISP3O95389 354 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 MRE11P49959 708 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 GALNT2Q10471 571 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 MSLNQ13421 630 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 BECN1Q14457 450 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 CCAR1Q8IX12 1150 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 ADGRG2Q8IZP9 1017 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 KHSRPQ92945 711 aaKnown RBP eCLIP1.94□□□□□ -2.15e-6■■■□□ 15.3
TRAPPC13-211ENST00000512009 AIFM3Q96NN9 605 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 TLE6Q9H808 572 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 CNTN3Q9P232 1028 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 ANAPC4Q9UJX5 808 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 SMG5Q9UPR3 1016 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 DAGLAQ9Y4D2 1042 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 MRFAP1Q9Y605 127 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 PCNX3Q9H6A9 2034 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 DCDC2CA8MYV0 355 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZNF195O14628 629 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 PLA2G6O60733 806 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 PAPSS2O95340 614 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 IPO7O95373 1038 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 SPATA31D3P0C874 917 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 EZRP15311 586 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 CTCFP49711 727 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 IHHQ14623 411 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 KCTD19Q17RG1 926 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 SKOR2Q2VWA4 1001 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZMYM1Q5SVZ6 1142 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 SPATA31D4Q6ZUB0 917 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 CCAR2Q8N163 923 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 UBR7Q8N806 425 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 TSEN2Q8NCE0 465 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 RTF1Q92541 710 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 STRN4Q9NRL3 753 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 PHF24Q9UPV7 400 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 KIF3AQ9Y496 699 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 LRRN2O75325 713 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZNF202O95125 648 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 PNMA6AP0CW24 399 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 MCM5P33992 734 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZFP36L2P47974 494 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 CDK7P50613 346 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 CBX1P83916 185 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 SETQ01105 290 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 SLC39A6Q13433 755 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 TAZQ16635 292 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZNF326Q5BKZ1 582 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 TTMPQ5BVD1 217 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 CRELD2Q6UXH1 353 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 PDZRN4Q6ZMN7 1036 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 PIK3AP1Q6ZUJ8 805 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 ARMCX2Q7L311 632 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 REPS2Q8NFH8 660 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 CAGE1Q8TC20 777 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 LEO1Q8WVC0 666 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZC3H10Q96K80 434 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 CCDC94Q9BW85 323 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 C17orf75Q9HAS0 396 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 PRDM11Q9NQV5 511 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 LEMD3Q9Y2U8 911 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 FAM208BQ5VWN6 2430 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 CEP295Q9C0D2 2601 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 EML6Q6ZMW3 1958 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 PSDA5PKW4 1024 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 C1SP09871 688 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 YY1P25490 414 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 ARID4AP29374 1257 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 HOXA6P31267 233 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 WNT7BP56706 349 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 GNL2Q13823 731 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 TSR1Q2NL82 804 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 TUSC1Q2TAM9 212 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 DACT2Q5SW24 774 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZNF362Q5T0B9 420 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 C8orf82Q6P1X6 216 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZDHHC24Q6UX98 284 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 TRAPPC11Q7Z392 1133 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 PNMA8AQ86V59 439 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 RNF168Q8IYW5 571 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 RPUSD2Q8IZ73 545 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 IFNL2Q8IZJ0 200 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 DDX55Q8NHQ9 600 aaKnown RBP eCLIP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 HAUS7Q99871 368 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms