RNA–Protein interactions for RNA: ENST00000511807.1

UBE2B-208, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-208ENST00000511807 FAAP100Q0VG06 881 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 KCTD1Q719H9 257 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 CYB5R4Q7L1T6 521 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.2□□□□□ -0.3
UBE2B-208ENST00000511807 CCDC144CPQ8IYA2 1237 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 FBXL16Q8N461 479 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 FGD4Q96M96 766 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 AGBL1Q96MI9 1066 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 GLT1D1Q96MS3 346 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 TTC14Q96N46 770 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 ZSCAN10Q96SZ4 725 aaPredicted RBP13.2□□□□□ -0.3
UBE2B-208ENST00000511807 RNF146Q9NTX7 359 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 LTBP2Q14767 1821 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 NMT2O60551 498 aa13.19□□□□□ -0.3
UBE2B-208ENST00000511807 ASGR1P07306 291 aa13.19□□□□□ -0.3
UBE2B-208ENST00000511807 ALAS1P13196 640 aa13.19□□□□□ -0.3
UBE2B-208ENST00000511807 ANTXR2P58335 489 aa13.19□□□□□ -0.3
UBE2B-208ENST00000511807 SNAP25P60880 206 aa13.19□□□□□ -0.3
UBE2B-208ENST00000511807 SMAD3P84022 425 aaKnown RBP13.19□□□□□ -0.3
UBE2B-208ENST00000511807 WTAPQ15007 396 aa13.19□□□□□ -0.3
UBE2B-208ENST00000511807 TMEM67Q5HYA8 995 aa13.19□□□□□ -0.3
UBE2B-208ENST00000511807 GNASQ5JWF2 1037 aa13.19□□□□□ -0.3
UBE2B-208ENST00000511807 CCSAPQ6IQ19 270 aaPredicted RBP13.19□□□□□ -0.3
UBE2B-208ENST00000511807 CCDC174Q6PII3 467 aa13.19□□□□□ -0.3
UBE2B-208ENST00000511807 Q6ZUG5 572 aa13.19□□□□□ -0.3
UBE2B-208ENST00000511807 NOL8Q76FK4 1167 aaKnown RBP13.19□□□□□ -0.3
UBE2B-208ENST00000511807 CHST3Q7LGC8 479 aa13.19□□□□□ -0.3
UBE2B-208ENST00000511807 ANKRD33Q7Z3H0 272 aa13.19□□□□□ -0.3
UBE2B-208ENST00000511807 DGKHQ86XP1 1220 aa13.19□□□□□ -0.3
UBE2B-208ENST00000511807 PCSK9Q8NBP7 692 aaKnown RBP13.19□□□□□ -0.3
UBE2B-208ENST00000511807 TOX2Q96NM4 488 aa13.19□□□□□ -0.3
UBE2B-208ENST00000511807 TRERF1Q96PN7 1200 aa13.19□□□□□ -0.3
UBE2B-208ENST00000511807 SEMA6BQ9H3T3 888 aa13.19□□□□□ -0.3
UBE2B-208ENST00000511807 A1CFQ9NQ94 594 aaKnown RBP13.19□□□□□ -0.3
UBE2B-208ENST00000511807 ZNF536O15090 1300 aa13.18□□□□□ -0.3
UBE2B-208ENST00000511807 CST5P28325 142 aaPredicted RBP13.18□□□□□ -0.3
UBE2B-208ENST00000511807 ANP32AP39687 249 aaKnown RBP13.18□□□□□ -0.3
UBE2B-208ENST00000511807 LIFRP42702 1097 aa13.18□□□□□ -0.3
UBE2B-208ENST00000511807 GJA9P57773 515 aa13.18□□□□□ -0.3
UBE2B-208ENST00000511807 CCDC96Q2M329 555 aa13.18□□□□□ -0.3
UBE2B-208ENST00000511807 RCSD1Q6JBY9 416 aa13.18□□□□□ -0.3
UBE2B-208ENST00000511807 SYNE3Q6ZMZ3 975 aa13.18□□□□□ -0.3
UBE2B-208ENST00000511807 RASGRP2Q7LDG7 609 aa13.18□□□□□ -0.3
UBE2B-208ENST00000511807 FAM133AQ8N9E0 248 aa13.18□□□□□ -0.3
UBE2B-208ENST00000511807 IGDCC4Q8TDY8 1250 aa13.18□□□□□ -0.3
UBE2B-208ENST00000511807 TCEANC2Q96MN5 208 aa13.18□□□□□ -0.3
UBE2B-208ENST00000511807 CDX2Q99626 313 aaPredicted RBP13.18□□□□□ -0.3
UBE2B-208ENST00000511807 ZKSCAN3Q9BRR0 538 aa13.18□□□□□ -0.3
UBE2B-208ENST00000511807 UPF3AQ9H1J1 476 aaKnown RBP13.18□□□□□ -0.3
UBE2B-208ENST00000511807 IL17RBQ9NRM6 502 aa13.18□□□□□ -0.3
UBE2B-208ENST00000511807 ELP1O95163 1332 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 TNKSO95271 1327 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 MROH7Q68CQ1 1323 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.17□□□□□ -0.3
UBE2B-208ENST00000511807 SOWAHBA6NEL2 793 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 CCDC69A6NI79 296 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 SH2B2O14492 632 aaPredicted RBP13.17□□□□□ -0.3
UBE2B-208ENST00000511807 AK2P54819 239 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 BEX3Q00994 111 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 TNFAIP2Q03169 654 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 TKFCQ3LXA3 575 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 IFIT1BQ5T764 474 aaKnown RBP13.17□□□□□ -0.3
UBE2B-208ENST00000511807 NFXL1Q6ZNB6 911 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.17□□□□□ -0.3
UBE2B-208ENST00000511807 MYLIPQ8WY64 445 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 ANKS1AQ92625 1134 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 BRF1Q92994 677 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 SNX21Q969T3 373 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 ZSCAN31Q96LW9 406 aaPredicted RBP13.17□□□□□ -0.3
UBE2B-208ENST00000511807 LRRC2Q9BYS8 371 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 AGXT2Q9BYV1 514 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 KATNBL1Q9H079 304 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 CCPG1Q9ULG6 757 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 PRR12Q9ULL5 1215 aa13.17□□□□□ -0.3
UBE2B-208ENST00000511807 RBM19Q9Y4C8 960 aaKnown RBP13.17□□□□□ -0.3
UBE2B-208ENST00000511807 DDX49Q9Y6V7 483 aaKnown RBP13.17□□□□□ -0.3
UBE2B-208ENST00000511807 A0A0U1RQG5 324 aaPredicted RBP13.16□□□□□ -0.3
UBE2B-208ENST00000511807 ASB14A6NK59 587 aa13.16□□□□□ -0.3
UBE2B-208ENST00000511807 ARVCFO00192 962 aa13.16□□□□□ -0.3
UBE2B-208ENST00000511807 PLA2G6O60733 806 aa13.16□□□□□ -0.3
UBE2B-208ENST00000511807 TIMP1P01033 207 aa13.16□□□□□ -0.3
UBE2B-208ENST00000511807 CDK7P50613 346 aa13.16□□□□□ -0.3
UBE2B-208ENST00000511807 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
UBE2B-208ENST00000511807 BECN1Q14457 450 aa13.16□□□□□ -0.3
UBE2B-208ENST00000511807 SEC23AQ15436 765 aa13.16□□□□□ -0.3
UBE2B-208ENST00000511807 MUM1L1Q5H9M0 696 aa13.16□□□□□ -0.3
UBE2B-208ENST00000511807 NSMFQ6X4W1 530 aa13.16□□□□□ -0.3
UBE2B-208ENST00000511807 SGMS1Q86VZ5 419 aa13.16□□□□□ -0.3
UBE2B-208ENST00000511807 ENAHQ8N8S7 591 aaPredicted RBP13.16□□□□□ -0.3
UBE2B-208ENST00000511807 TTYH1Q9H313 450 aaPredicted RBP13.16□□□□□ -0.3
UBE2B-208ENST00000511807 KAT14Q9H8E8 782 aa13.16□□□□□ -0.3
UBE2B-208ENST00000511807 TBX21Q9UL17 535 aa13.16□□□□□ -0.3
UBE2B-208ENST00000511807 LIMCH1Q9UPQ0 1083 aa13.16□□□□□ -0.3
UBE2B-208ENST00000511807 PLXNA1Q9UIW2 1896 aa13.15□□□□□ -0.3
UBE2B-208ENST00000511807 CTAGE5O15320 804 aa13.15□□□□□ -0.3
UBE2B-208ENST00000511807 TLR3O15455 904 aaKnown RBP13.15□□□□□ -0.3
UBE2B-208ENST00000511807 TOP1P11387 765 aaKnown RBP13.15□□□□□ -0.3
UBE2B-208ENST00000511807 SLC16A2P36021 539 aa13.15□□□□□ -0.3
UBE2B-208ENST00000511807 TOB2Q14106 344 aaPredicted RBP13.15□□□□□ -0.3
UBE2B-208ENST00000511807 TTBK2Q6IQ55 1244 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms