RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 CORO7P57737 925 aa4.95□□□□□ -1.62
CHD1-207ENST00000511628 PAQR3Q6TCH7 311 aa4.95□□□□□ -1.62
CHD1-207ENST00000511628 C6orf15Q6UXA7 325 aaPredicted RBP4.95□□□□□ -1.62
CHD1-207ENST00000511628 RPTNQ6XPR3 784 aa4.95□□□□□ -1.62
CHD1-207ENST00000511628 CPNE8Q86YQ8 564 aa4.95□□□□□ -1.62
CHD1-207ENST00000511628 MCF2L2Q86YR7 1114 aa4.95□□□□□ -1.62
CHD1-207ENST00000511628 SIAH1Q8IUQ4 282 aa4.95□□□□□ -1.62
CHD1-207ENST00000511628 FAM178BQ8IXR5 827 aa4.95□□□□□ -1.62
CHD1-207ENST00000511628 MZB1Q8WU39 189 aa4.95□□□□□ -1.62
CHD1-207ENST00000511628 BTG4Q9NY30 223 aa4.95□□□□□ -1.62
CHD1-207ENST00000511628 KLHL14Q9P2G3 628 aa4.95□□□□□ -1.62
CHD1-207ENST00000511628 APEX2Q9UBZ4 518 aa4.95□□□□□ -1.62
CHD1-207ENST00000511628 PRKAG3Q9UGI9 489 aa4.95□□□□□ -1.62
CHD1-207ENST00000511628 NUDT5Q9UKK9 219 aa4.95□□□□□ -1.62
CHD1-207ENST00000511628 RWDD3Q9Y3V2 267 aa4.95□□□□□ -1.62
CHD1-207ENST00000511628 KCNJ6P48051 423 aa4.94□□□□□ -1.62
CHD1-207ENST00000511628 MAPKAPK2P49137 400 aa4.94□□□□□ -1.62
CHD1-207ENST00000511628 EPHB3P54753 998 aa4.94□□□□□ -1.62
CHD1-207ENST00000511628 ZNF200P98182 395 aaPredicted RBP4.94□□□□□ -1.62
CHD1-207ENST00000511628 SCRN1Q12765 414 aa4.94□□□□□ -1.62
CHD1-207ENST00000511628 SF3A1Q15459 793 aaKnown RBP4.94□□□□□ -1.62
CHD1-207ENST00000511628 TARBP2Q15633 366 aaKnown RBP4.94□□□□□ -1.62
CHD1-207ENST00000511628 PLEKHN1Q494U1 663 aaPredicted RBP4.94□□□□□ -1.62
CHD1-207ENST00000511628 CNTD2Q9H8S5 307 aa4.94□□□□□ -1.62
CHD1-207ENST00000511628 CLEC1BQ9P126 229 aa4.94□□□□□ -1.62
CHD1-207ENST00000511628 ZC3H12DA2A288 527 aaKnown RBP4.93□□□□□ -1.62
CHD1-207ENST00000511628 DBHP09172 617 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 ETFBP38117 255 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 CDR1P51861 262 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 NCKAP1LP55160 1127 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 SSPNQ14714 243 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 FBLN7Q53RD9 439 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 GTF2IRD2BQ6EKJ0 949 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 CNKSR3Q6P9H4 555 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 GTF2IRD2Q86UP8 949 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 LDHDQ86WU2 507 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 NLGN1Q8N2Q7 840 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 ALG3Q92685 438 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 DNAJC2Q99543 621 aaKnown RBP4.93□□□□□ -1.62
CHD1-207ENST00000511628 MCMBPQ9BTE3 642 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 GCM1Q9NP62 436 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 GPRC5CQ9NQ84 441 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 GULP1Q9UBP9 304 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 SUSD2Q9UGT4 822 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 EMC9Q9Y3B6 208 aa4.93□□□□□ -1.62
CHD1-207ENST00000511628 B2RBV5 119 aa4.92□□□□□ -1.62
CHD1-207ENST00000511628 SRGAP3O43295 1099 aa4.92□□□□□ -1.62
CHD1-207ENST00000511628 MYO1BO43795 1136 aa4.92□□□□□ -1.62
CHD1-207ENST00000511628 BUB1BO60566 1050 aaPredicted RBP4.92□□□□□ -1.62
CHD1-207ENST00000511628 FUCA1P04066 466 aa4.92□□□□□ -1.62
CHD1-207ENST00000511628 SNRPB2P08579 225 aaKnown RBP4.92□□□□□ -1.62
CHD1-207ENST00000511628 PLS3P13797 630 aa4.92□□□□□ -1.62
CHD1-207ENST00000511628 BMP7P18075 431 aa4.92□□□□□ -1.62
CHD1-207ENST00000511628 ECI1P42126 302 aa4.92□□□□□ -1.62
CHD1-207ENST00000511628 AFF3P51826 1226 aaKnown RBP4.92□□□□□ -1.62
CHD1-207ENST00000511628 PRR5P85299 388 aa4.92□□□□□ -1.62
CHD1-207ENST00000511628 CBX2Q14781 532 aaPredicted RBP4.92□□□□□ -1.62
CHD1-207ENST00000511628 LCNL1Q6ZST4 164 aa4.92□□□□□ -1.62
CHD1-207ENST00000511628 EEPD1Q7L9B9 569 aa4.92□□□□□ -1.62
CHD1-207ENST00000511628 TRIM59Q8IWR1 403 aa4.92□□□□□ -1.62
CHD1-207ENST00000511628 NLGN2Q8NFZ4 835 aa4.92□□□□□ -1.62
CHD1-207ENST00000511628 UBXN4Q92575 508 aa4.92□□□□□ -1.62
CHD1-207ENST00000511628 PEX11GQ96HA9 241 aa4.92□□□□□ -1.62
CHD1-207ENST00000511628 ZCCHC4Q9H5U6 513 aa4.92□□□□□ -1.62
CHD1-207ENST00000511628 ZNF408Q9H9D4 720 aa4.92□□□□□ -1.62
CHD1-207ENST00000511628 SUSD5O60279 629 aa4.91□□□□□ -1.62
CHD1-207ENST00000511628 ATP2B1P20020 1258 aa4.91□□□□□ -1.62
CHD1-207ENST00000511628 GTF2F1P35269 517 aaKnown RBP eCLIP4.91□□□□□ -1.62
CHD1-207ENST00000511628 IQCEQ6IPM2 695 aa4.91□□□□□ -1.62
CHD1-207ENST00000511628 SPOCD1Q6ZMY3 1216 aa4.91□□□□□ -1.62
CHD1-207ENST00000511628 C1QL4Q86Z23 238 aa4.91□□□□□ -1.62
CHD1-207ENST00000511628 BTN2A2Q8WVV5 523 aa4.91□□□□□ -1.62
CHD1-207ENST00000511628 CHAMP1Q96JM3 812 aa4.91□□□□□ -1.62
CHD1-207ENST00000511628 PWWP2AQ96N64 755 aa4.91□□□□□ -1.62
CHD1-207ENST00000511628 TRIM55Q9BYV6 548 aa4.91□□□□□ -1.62
CHD1-207ENST00000511628 RXFP1Q9HBX9 757 aa4.91□□□□□ -1.62
CHD1-207ENST00000511628 CYP26B1Q9NR63 512 aa4.91□□□□□ -1.62
CHD1-207ENST00000511628 ST7Q9NRC1 585 aa4.91□□□□□ -1.62
CHD1-207ENST00000511628 MARCH2Q9P0N8 246 aa4.91□□□□□ -1.62
CHD1-207ENST00000511628 C7orf72A4D263 438 aa4.9□□□□□ -1.63
CHD1-207ENST00000511628 U2SURPO15042 1029 aaKnown RBP4.9□□□□□ -1.63
CHD1-207ENST00000511628 MEFVO15553 781 aaPredicted RBP4.9□□□□□ -1.63
CHD1-207ENST00000511628 SASH1O94885 1247 aa4.9□□□□□ -1.63
CHD1-207ENST00000511628 ITGAVP06756 1048 aa4.9□□□□□ -1.63
CHD1-207ENST00000511628 THBDP07204 575 aa4.9□□□□□ -1.63
CHD1-207ENST00000511628 HOXC12P31275 282 aa4.9□□□□□ -1.63
CHD1-207ENST00000511628 CEBPAP49715 358 aaPredicted RBP4.9□□□□□ -1.63
CHD1-207ENST00000511628 ANKS3Q6ZW76 656 aa4.9□□□□□ -1.63
CHD1-207ENST00000511628 AMIGO3Q86WK7 504 aa4.9□□□□□ -1.63
CHD1-207ENST00000511628 CILP2Q8IUL8 1156 aa4.9□□□□□ -1.63
CHD1-207ENST00000511628 PANK1Q8TE04 598 aa4.9□□□□□ -1.63
CHD1-207ENST00000511628 HNRNPLLQ8WVV9 542 aaKnown RBP4.9□□□□□ -1.63
CHD1-207ENST00000511628 CCDC140Q96MF4 163 aa4.9□□□□□ -1.63
CHD1-207ENST00000511628 LGR4Q9BXB1 951 aa4.9□□□□□ -1.63
CHD1-207ENST00000511628 AP5M1Q9H0R1 490 aa4.9□□□□□ -1.63
CHD1-207ENST00000511628 NKX2-4Q9H2Z4 354 aa4.9□□□□□ -1.63
CHD1-207ENST00000511628 STK10O94804 968 aaKnown RBP4.89□□□□□ -1.63
CHD1-207ENST00000511628 GJB6O95452 261 aa4.89□□□□□ -1.63
CHD1-207ENST00000511628 CPP00450 1065 aa4.89□□□□□ -1.63
CHD1-207ENST00000511628 INHBBP09529 407 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms