RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 USP40Q9NVE5 1235 aa9.09□□□□□ -0.95
HTT-208ENST00000510626 WDR19Q8NEZ3 1342 aa9.09□□□□□ -0.95
HTT-208ENST00000510626 RPN1P04843 607 aaKnown RBP9.09□□□□□ -0.95
HTT-208ENST00000510626 ATP5BP06576 529 aaKnown RBP9.09□□□□□ -0.95
HTT-208ENST00000510626 BZW1Q7L1Q6 419 aaKnown RBP9.09□□□□□ -0.95
HTT-208ENST00000510626 PARP9Q8IXQ6 854 aa9.09□□□□□ -0.95
HTT-208ENST00000510626 MTRQ99707 1265 aa9.09□□□□□ -0.95
HTT-208ENST00000510626 ABCC1P33527 1531 aa9.09□□□□□ -0.95
HTT-208ENST00000510626 CXorf38Q8TB03 319 aa9.09□□□□□ -0.96
HTT-208ENST00000510626 PDP2Q9P2J9 529 aa9.09□□□□□ -0.96
HTT-208ENST00000510626 PALM3A6NDB9 673 aaPredicted RBP9.08□□□□□ -0.96
HTT-208ENST00000510626 ATP1A2P50993 1020 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 RSBN1LQ6PCB5 846 aaPredicted RBP9.08□□□□□ -0.96
HTT-208ENST00000510626 FBXO38Q6PIJ6 1188 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 RPAP1Q9BWH6 1393 aaPredicted RBP9.08□□□□□ -0.96
HTT-208ENST00000510626 IQANK1A0A1B0GTG1 560 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 NEK2P51955 445 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 COPB1P53618 953 aaKnown RBP9.08□□□□□ -0.96
HTT-208ENST00000510626 LRRC63Q05C16 580 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 OTUD6AQ7L8S5 288 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 ZNF579Q8NAF0 562 aaKnown RBP9.08□□□□□ -0.96
HTT-208ENST00000510626 TCEANC2Q96MN5 208 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 GPAA1O43292 621 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 MMEP08473 750 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 C4BPBP20851 252 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 LMBR1LQ6UX01 489 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 CCDC85AQ96PX6 553 aaPredicted RBP9.08□□□□□ -0.96
HTT-208ENST00000510626 TRIM31Q9BZY9 425 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 OR52Z1P0C646 297 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 LETM2Q2VYF4 491 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 ZNF354CQ86Y25 554 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 EXOC8Q8IYI6 725 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 FANCLQ9NW38 375 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 TADA3O75528 432 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 ATF7P17544 494 aaPredicted RBP9.08□□□□□ -0.96
HTT-208ENST00000510626 ART3Q13508 389 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 MMEL1Q495T6 779 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 BEND3Q5T5X7 828 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 CC2D1AQ6P1N0 951 aaPredicted RBP9.08□□□□□ -0.96
HTT-208ENST00000510626 MGARPQ8TDB4 240 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 C1orf112Q9NSG2 853 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 DAPK3O43293 454 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 TMCC1O94876 653 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 RFX1P22670 979 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 TFCP2Q12800 502 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 PLCH2O75038 1416 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 AP2B1P63010 937 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 PNOCQ13519 176 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 CENPUQ71F23 418 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 PDZD8Q8NEN9 1154 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 DONSONQ9NYP3 566 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 GMNCA6NCL1 334 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 STRNO43815 780 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 LDHBP07195 334 aaKnown RBP9.08□□□□□ -0.96
HTT-208ENST00000510626 PER1O15534 1290 aaPredicted RBP9.08□□□□□ -0.96
HTT-208ENST00000510626 STX1BP61266 288 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 HNRNPLLQ8WVV9 542 aaKnown RBP9.08□□□□□ -0.96
HTT-208ENST00000510626 RCOR1Q9UKL0 485 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 F8W8V4 182 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 WDR46O15213 610 aaKnown RBP9.08□□□□□ -0.96
HTT-208ENST00000510626 ANO5Q75V66 913 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 MSL3Q8N5Y2 521 aaKnown RBP9.08□□□□□ -0.96
HTT-208ENST00000510626 CCDC28BQ9BUN5 200 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 TEX12Q9BXU0 123 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 COL4A3BPQ9Y5P4 624 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 KRT81Q14533 505 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 GIPC2Q8TF65 315 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 TBC1D22AQ8WUA7 517 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 NLRP3Q96P20 1036 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 MAD1L1Q9Y6D9 718 aa9.08□□□□□ -0.96
HTT-208ENST00000510626 GPC4O75487 556 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 MAP3K10Q02779 954 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 MTBPQ96DY7 904 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 SCHIP1Q9P0W5 487 aaPredicted RBP9.07□□□□□ -0.96
HTT-208ENST00000510626 ARHGAP26Q9UNA1 814 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 UBN2Q6ZU65 1347 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 SRRM3A6NNA2 597 aaPredicted RBP9.07□□□□□ -0.96
HTT-208ENST00000510626 APOA1P02647 267 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 SERPINB2P05120 415 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 KRT26Q7Z3Y9 468 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 MIF4GDA9UHW6 222 aaKnown RBP9.07□□□□□ -0.96
HTT-208ENST00000510626 IGBP1P78318 339 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 ORC2Q13416 577 aaPredicted RBP9.07□□□□□ -0.96
HTT-208ENST00000510626 EXOC3L4Q17RC7 722 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 COPG1Q9Y678 874 aaKnown RBP9.07□□□□□ -0.96
HTT-208ENST00000510626 MICAL3Q7RTP6 2002 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 PTCD1O75127 700 aaKnown RBP9.07□□□□□ -0.96
HTT-208ENST00000510626 DMP1Q13316 513 aaPredicted RBP9.07□□□□□ -0.96
HTT-208ENST00000510626 APBB2Q92870 758 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 BSDC1Q9NW68 430 aaPredicted RBP9.07□□□□□ -0.96
HTT-208ENST00000510626 KLC3Q6P597 504 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 PROM2Q8N271 834 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 FAM192AQ9GZU8 254 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 GGA2Q9UJY4 613 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.07□□□□□ -0.96
HTT-208ENST00000510626 LRIG3Q6UXM1 1119 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 GGPS1O95749 300 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 FKBP3Q00688 224 aaKnown RBP9.07□□□□□ -0.96
HTT-208ENST00000510626 PCGF5Q86SE9 256 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 C16orf71Q8IYS4 520 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms