RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 DGLUCYQ7Z3D6 616 aa13.08□□□□□ -0.32
SNF8-207ENST00000509995 NKD2Q969F2 451 aaPredicted RBP13.08□□□□□ -0.32
SNF8-207ENST00000509995 GOPCQ9HD26 462 aa13.08□□□□□ -0.32
SNF8-207ENST00000509995 FBXO40Q9UH90 709 aa13.08□□□□□ -0.32
SNF8-207ENST00000509995 SALL2Q9Y467 1007 aaPredicted RBP13.08□□□□□ -0.32
SNF8-207ENST00000509995 INSL6Q9Y581 213 aa13.08□□□□□ -0.32
SNF8-207ENST00000509995 CEP250Q9BV73 2442 aa13.08□□□□□ -0.32
SNF8-207ENST00000509995 FRYLO94915 3013 aa13.07□□□□□ -0.32
SNF8-207ENST00000509995 ABHD14A-ACY1A0A1B0GW23 586 aa13.07□□□□□ -0.32
SNF8-207ENST00000509995 H3BNC9 293 aa13.07□□□□□ -0.32
SNF8-207ENST00000509995 SRGAP3O43295 1099 aa13.07□□□□□ -0.32
SNF8-207ENST00000509995 EEF2P13639 858 aaKnown RBP13.07□□□□□ -0.32
SNF8-207ENST00000509995 ZAP70P43403 619 aa13.07□□□□□ -0.32
SNF8-207ENST00000509995 TMEM63BQ5T3F8 832 aa13.07□□□□□ -0.32
SNF8-207ENST00000509995 NFRKBQ6P4R8 1299 aa13.07□□□□□ -0.32
SNF8-207ENST00000509995 CPXCR1Q8N123 301 aa13.07□□□□□ -0.32
SNF8-207ENST00000509995 FAM133AQ8N9E0 248 aa13.07□□□□□ -0.32
SNF8-207ENST00000509995 AFAP1L1Q8TED9 768 aa13.07□□□□□ -0.32
SNF8-207ENST00000509995 RMDN1Q96DB5 314 aa13.07□□□□□ -0.32
SNF8-207ENST00000509995 SAMD11Q96NU1 681 aa13.07□□□□□ -0.32
SNF8-207ENST00000509995 PDGFCQ9NRA1 345 aa13.07□□□□□ -0.32
SNF8-207ENST00000509995 SWAP70Q9UH65 585 aa13.07□□□□□ -0.32
SNF8-207ENST00000509995 HDAC5Q9UQL6 1122 aa13.07□□□□□ -0.32
SNF8-207ENST00000509995 LCTP09848 1927 aa13.06□□□□□ -0.32
SNF8-207ENST00000509995 ASB14A6NK59 587 aa13.06□□□□□ -0.32
SNF8-207ENST00000509995 RAD21O60216 631 aa13.06□□□□□ -0.32
SNF8-207ENST00000509995 EFCAB14O75071 495 aa13.06□□□□□ -0.32
SNF8-207ENST00000509995 TBX10O75333 385 aa13.06□□□□□ -0.32
SNF8-207ENST00000509995 IDH1O75874 414 aaKnown RBP13.06□□□□□ -0.32
SNF8-207ENST00000509995 CXCL10P02778 98 aa13.06□□□□□ -0.32
SNF8-207ENST00000509995 GPM6BQ13491 265 aa13.06□□□□□ -0.32
SNF8-207ENST00000509995 TCTN1Q2MV58 587 aa13.06□□□□□ -0.32
SNF8-207ENST00000509995 NBPF20Q3BBV1 942 aa13.06□□□□□ -0.32
SNF8-207ENST00000509995 IQSEC1Q6DN90 963 aa13.06□□□□□ -0.32
SNF8-207ENST00000509995 TAPT1Q6NXT6 567 aa13.06□□□□□ -0.32
SNF8-207ENST00000509995 FBXO16Q8IX29 292 aaPredicted RBP13.06□□□□□ -0.32
SNF8-207ENST00000509995 CHST13Q8NET6 341 aa13.06□□□□□ -0.32
SNF8-207ENST00000509995 CAGE1Q8TC20 777 aa13.06□□□□□ -0.32
SNF8-207ENST00000509995 SP7Q8TDD2 431 aaPredicted RBP13.06□□□□□ -0.32
SNF8-207ENST00000509995 MTG1Q9BT17 334 aaPredicted RBP13.06□□□□□ -0.32
SNF8-207ENST00000509995 MCM9Q9NXL9 1143 aa13.06□□□□□ -0.32
SNF8-207ENST00000509995 LOC730098B7Z3J9 87 aa13.05□□□□□ -0.32
SNF8-207ENST00000509995 MYL3P08590 195 aa13.05□□□□□ -0.32
SNF8-207ENST00000509995 CBX2Q14781 532 aaPredicted RBP13.05□□□□□ -0.32
SNF8-207ENST00000509995 CCDC158Q5M9N0 1113 aa13.05□□□□□ -0.32
SNF8-207ENST00000509995 MCTP2Q6DN12 878 aa13.05□□□□□ -0.32
SNF8-207ENST00000509995 FRMD5Q7Z6J6 570 aa13.05□□□□□ -0.32
SNF8-207ENST00000509995 CCDC155Q8N6L0 562 aa13.05□□□□□ -0.32
SNF8-207ENST00000509995 PPP1R13LQ8WUF5 828 aa13.05□□□□□ -0.32
SNF8-207ENST00000509995 RIOK1Q9BRS2 568 aaKnown RBP13.05□□□□□ -0.32
SNF8-207ENST00000509995 RAVER2Q9HCJ3 691 aaKnown RBP13.05□□□□□ -0.32
SNF8-207ENST00000509995 CD207Q9UJ71 328 aa13.05□□□□□ -0.32
SNF8-207ENST00000509995 NOD1Q9Y239 953 aa13.05□□□□□ -0.32
SNF8-207ENST00000509995 DDX49Q9Y6V7 483 aaKnown RBP13.05□□□□□ -0.32
SNF8-207ENST00000509995 BAZ2AQ9UIF9 1905 aaKnown RBP13.05□□□□□ -0.32
SNF8-207ENST00000509995 GREB1LQ9C091 1923 aaPredicted RBP13.04□□□□□ -0.32
SNF8-207ENST00000509995 NBNO60934 754 aa13.04□□□□□ -0.32
SNF8-207ENST00000509995 PARNO95453 639 aaKnown RBP13.04□□□□□ -0.32
SNF8-207ENST00000509995 SELPP16109 830 aa13.04□□□□□ -0.32
SNF8-207ENST00000509995 CPT1AP50416 773 aa13.04□□□□□ -0.32
SNF8-207ENST00000509995 HTRA4P83105 476 aaPredicted RBP13.04□□□□□ -0.32
SNF8-207ENST00000509995 PTPN11Q06124 597 aaPredicted RBP13.04□□□□□ -0.32
SNF8-207ENST00000509995 HYAL1Q12794 435 aa13.04□□□□□ -0.32
SNF8-207ENST00000509995 MKRN4PQ13434 485 aaPredicted RBP13.04□□□□□ -0.32
SNF8-207ENST00000509995 LRRC8DQ7L1W4 858 aa13.04□□□□□ -0.32
SNF8-207ENST00000509995 EEPD1Q7L9B9 569 aa13.04□□□□□ -0.32
SNF8-207ENST00000509995 PRPF38AQ8NAV1 312 aaKnown RBP13.04□□□□□ -0.32
SNF8-207ENST00000509995 DYNLL2Q96FJ2 89 aa13.04□□□□□ -0.32
SNF8-207ENST00000509995 ZNF512BQ96KM6 892 aaPredicted RBP13.04□□□□□ -0.32
SNF8-207ENST00000509995 CCDC17Q96LX7 622 aa13.04□□□□□ -0.32
SNF8-207ENST00000509995 NUP88Q99567 741 aaPredicted RBP13.04□□□□□ -0.32
SNF8-207ENST00000509995 DBNDD2Q9BQY9 259 aa13.04□□□□□ -0.32
SNF8-207ENST00000509995 GPHNQ9NQX3 736 aaPredicted RBP13.04□□□□□ -0.32
SNF8-207ENST00000509995 SPTBN2O15020 2390 aa13.04□□□□□ -0.32
SNF8-207ENST00000509995 ZBED4O75132 1171 aa13.03□□□□□ -0.32
SNF8-207ENST00000509995 PDGFBP01127 241 aaPredicted RBP13.03□□□□□ -0.32
SNF8-207ENST00000509995 CYP2D6P10635 497 aa13.03□□□□□ -0.32
SNF8-207ENST00000509995 MTX1Q13505 466 aa13.03□□□□□ -0.32
SNF8-207ENST00000509995 IKBKEQ14164 716 aa13.03□□□□□ -0.32
SNF8-207ENST00000509995 DUSP28Q4G0W2 176 aa13.03□□□□□ -0.32
SNF8-207ENST00000509995 FBXO11Q86XK2 927 aa13.03□□□□□ -0.32
SNF8-207ENST00000509995 SSH1Q8WYL5 1049 aa13.03□□□□□ -0.32
SNF8-207ENST00000509995 MEIS3Q99687 375 aa13.03□□□□□ -0.32
SNF8-207ENST00000509995 KANSL2Q9H9L4 492 aa13.03□□□□□ -0.32
SNF8-207ENST00000509995 SLC38A10Q9HBR0 1119 aa13.03□□□□□ -0.32
SNF8-207ENST00000509995 HOMER2Q9NSB8 354 aa13.03□□□□□ -0.32
SNF8-207ENST00000509995 CTDP1Q9Y5B0 961 aaPredicted RBP13.03□□□□□ -0.32
SNF8-207ENST00000509995 USP17L12C9JPN9 530 aa13.02□□□□□ -0.33
SNF8-207ENST00000509995 USP17L21D6R901 530 aa13.02□□□□□ -0.33
SNF8-207ENST00000509995 EYA4O95677 639 aa13.02□□□□□ -0.33
SNF8-207ENST00000509995 PTGISQ16647 500 aa13.02□□□□□ -0.33
SNF8-207ENST00000509995 TMED8Q6PL24 325 aaPredicted RBP13.02□□□□□ -0.33
SNF8-207ENST00000509995 KIAA1211Q6ZU35 1233 aa13.02□□□□□ -0.33
SNF8-207ENST00000509995 TMEM192Q8IY95 271 aa13.02□□□□□ -0.33
SNF8-207ENST00000509995 CTAGE1Q96RT6 745 aa13.02□□□□□ -0.33
SNF8-207ENST00000509995 CRNKL1Q9BZJ0 848 aaKnown RBP13.02□□□□□ -0.33
SNF8-207ENST00000509995 ACAD9Q9H845 621 aa13.02□□□□□ -0.33
SNF8-207ENST00000509995 VTA1Q9NP79 307 aa13.02□□□□□ -0.33
SNF8-207ENST00000509995 A1CFQ9NQ94 594 aaKnown RBP13.02□□□□□ -0.33
SNF8-207ENST00000509995 COG6Q9Y2V7 657 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms