RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 CDC27P30260 824 aa15.76■□□□□ 0.11
SNF8-206ENST00000509989 HOXA13P31271 388 aaPredicted RBP15.76■□□□□ 0.11
SNF8-206ENST00000509989 LRRC41Q15345 812 aa15.76■□□□□ 0.11
SNF8-206ENST00000509989 TAPT1Q6NXT6 567 aa15.76■□□□□ 0.11
SNF8-206ENST00000509989 FANCBQ8NB91 859 aa15.76■□□□□ 0.11
SNF8-206ENST00000509989 ZFP91Q96JP5 570 aaPredicted RBP15.76■□□□□ 0.11
SNF8-206ENST00000509989 AMNQ9BXJ7 453 aa15.76■□□□□ 0.11
SNF8-206ENST00000509989 C11orf49Q9H6J7 331 aa15.76■□□□□ 0.11
SNF8-206ENST00000509989 PCDHA1Q9Y5I3 950 aa15.76■□□□□ 0.11
SNF8-206ENST00000509989 SLC12A7Q9Y666 1083 aa15.76■□□□□ 0.11
SNF8-206ENST00000509989 CTAGE5O15320 804 aa15.75■□□□□ 0.11
SNF8-206ENST00000509989 PPFIA3O75145 1194 aa15.75■□□□□ 0.11
SNF8-206ENST00000509989 ADAMTS4O75173 837 aa15.75■□□□□ 0.11
SNF8-206ENST00000509989 CFBP00751 764 aa15.75■□□□□ 0.11
SNF8-206ENST00000509989 CASTP20810 708 aaKnown RBP15.75■□□□□ 0.11
SNF8-206ENST00000509989 RPS6KB1P23443 525 aa15.75■□□□□ 0.11
SNF8-206ENST00000509989 FUT2Q10981 343 aa15.75■□□□□ 0.11
SNF8-206ENST00000509989 KRT32Q14532 448 aa15.75■□□□□ 0.11
SNF8-206ENST00000509989 LRRC26Q2I0M4 334 aa15.75■□□□□ 0.11
SNF8-206ENST00000509989 TMTC3Q6ZXV5 915 aa15.75■□□□□ 0.11
SNF8-206ENST00000509989 NECAB2Q7Z6G3 386 aa15.75■□□□□ 0.11
SNF8-206ENST00000509989 MSL3Q8N5Y2 521 aaKnown RBP15.75■□□□□ 0.11
SNF8-206ENST00000509989 ANKLE1Q8NAG6 615 aa15.75■□□□□ 0.11
SNF8-206ENST00000509989 CTCFLQ8NI51 663 aaPredicted RBP15.75■□□□□ 0.11
SNF8-206ENST00000509989 MORC4Q8TE76 937 aa15.75■□□□□ 0.11
SNF8-206ENST00000509989 BRF1Q92994 677 aa15.75■□□□□ 0.11
SNF8-206ENST00000509989 FERMT2Q96AC1 680 aa15.75■□□□□ 0.11
SNF8-206ENST00000509989 SPZ1Q9BXG8 430 aa15.75■□□□□ 0.11
SNF8-206ENST00000509989 UPF3BQ9BZI7 483 aaKnown RBP15.75■□□□□ 0.11
SNF8-206ENST00000509989 CNPY2Q9Y2B0 182 aa15.75■□□□□ 0.11
SNF8-206ENST00000509989 SYNRGQ9UMZ2 1314 aa15.74■□□□□ 0.11
SNF8-206ENST00000509989 PNMA6FA0A0J9YX94 578 aa15.74■□□□□ 0.11
SNF8-206ENST00000509989 AKR1A1P14550 325 aa15.74■□□□□ 0.11
SNF8-206ENST00000509989 SMPD1P17405 629 aa15.74■□□□□ 0.11
SNF8-206ENST00000509989 ATN1P54259 1190 aaPredicted RBP15.74■□□□□ 0.11
SNF8-206ENST00000509989 TOB2Q14106 344 aaPredicted RBP15.74■□□□□ 0.11
SNF8-206ENST00000509989 BLOC1S2Q6QNY1 142 aa15.74■□□□□ 0.11
SNF8-206ENST00000509989 DPF3Q92784 378 aa15.74■□□□□ 0.11
SNF8-206ENST00000509989 MAP3K14Q99558 947 aa15.74■□□□□ 0.11
SNF8-206ENST00000509989 SENP6Q9GZR1 1112 aaPredicted RBP15.74■□□□□ 0.11
SNF8-206ENST00000509989 ABHD16BQ9H3Z7 469 aa15.74■□□□□ 0.11
SNF8-206ENST00000509989 XPNPEP3Q9NQH7 507 aa15.74■□□□□ 0.11
SNF8-206ENST00000509989 NRBP1Q9UHY1 535 aa15.74■□□□□ 0.11
SNF8-206ENST00000509989 CNTNAP5Q8WYK1 1306 aa15.73■□□□□ 0.11
SNF8-206ENST00000509989 H0YGN5 161 aa15.73■□□□□ 0.11
SNF8-206ENST00000509989 ADAMTS3O15072 1205 aa15.73■□□□□ 0.11
SNF8-206ENST00000509989 EDNRBP24530 442 aa15.73■□□□□ 0.11
SNF8-206ENST00000509989 ADD1P35611 737 aaKnown RBP15.73■□□□□ 0.11
SNF8-206ENST00000509989 HSD17B4P51659 736 aa15.73■□□□□ 0.11
SNF8-206ENST00000509989 BEX3Q00994 111 aa15.73■□□□□ 0.11
SNF8-206ENST00000509989 TMTC2Q8N394 836 aa15.73■□□□□ 0.11
SNF8-206ENST00000509989 RGS22Q8NE09 1264 aa15.73■□□□□ 0.11
SNF8-206ENST00000509989 IL31RAQ8NI17 732 aa15.73■□□□□ 0.11
SNF8-206ENST00000509989 COPS5Q92905 334 aa15.73■□□□□ 0.11
SNF8-206ENST00000509989 GPKOWQ92917 476 aaPredicted RBP eCLIP15.73■□□□□ 0.11
SNF8-206ENST00000509989 ZSWIM6Q9HCJ5 1215 aa15.73■□□□□ 0.11
SNF8-206ENST00000509989 FAM184BQ9ULE4 1060 aa15.73■□□□□ 0.11
SNF8-206ENST00000509989 NAP1L2Q9ULW6 460 aaPredicted RBP15.73■□□□□ 0.11
SNF8-206ENST00000509989 MRPL11Q9Y3B7 192 aaKnown RBP15.73■□□□□ 0.11
SNF8-206ENST00000509989 ASB14A6NK59 587 aa15.72■□□□□ 0.11
SNF8-206ENST00000509989 GOLGA8AA7E2F4 631 aa15.72■□□□□ 0.11
SNF8-206ENST00000509989 GOLGA8BA8MQT2 603 aa15.72■□□□□ 0.11
SNF8-206ENST00000509989 RBAK-RBAKDNI3L0D1 243 aa15.72■□□□□ 0.11
SNF8-206ENST00000509989 ZBTB43O43298 467 aa15.72■□□□□ 0.11
SNF8-206ENST00000509989 MSCO60682 206 aa15.72■□□□□ 0.11
SNF8-206ENST00000509989 ARIH2O95376 493 aa15.72■□□□□ 0.11
SNF8-206ENST00000509989 RARBP10826 455 aa15.72■□□□□ 0.11
SNF8-206ENST00000509989 EIF2AK2P19525 551 aaKnown RBP15.72■□□□□ 0.11
SNF8-206ENST00000509989 C8orf34Q49A92 452 aa15.72■□□□□ 0.11
SNF8-206ENST00000509989 TYW1BQ6NUM6 668 aa15.72■□□□□ 0.11
SNF8-206ENST00000509989 AGXT2Q9BYV1 514 aa15.72■□□□□ 0.11
SNF8-206ENST00000509989 GNEQ9Y223 722 aaKnown RBP15.72■□□□□ 0.11
SNF8-206ENST00000509989 DNM1LO00429 736 aa15.71■□□□□ 0.11
SNF8-206ENST00000509989 KIF5BP33176 963 aa15.71■□□□□ 0.11
SNF8-206ENST00000509989 GHRHRQ02643 423 aa15.71■□□□□ 0.11
SNF8-206ENST00000509989 TNFAIP2Q03169 654 aa15.71■□□□□ 0.11
SNF8-206ENST00000509989 RTN1Q16799 776 aa15.71■□□□□ 0.11
SNF8-206ENST00000509989 CCSAPQ6IQ19 270 aaPredicted RBP15.71■□□□□ 0.11
SNF8-206ENST00000509989 USP17L6PQ6QN14 398 aa15.71■□□□□ 0.11
SNF8-206ENST00000509989 RUFY3Q7L099 469 aa15.71■□□□□ 0.11
SNF8-206ENST00000509989 C7orf61Q8IZ16 206 aa15.71■□□□□ 0.11
SNF8-206ENST00000509989 KLHDC9Q8NEP7 349 aa15.71■□□□□ 0.11
SNF8-206ENST00000509989 RRP36Q96EU6 259 aaKnown RBP15.71■□□□□ 0.11
SNF8-206ENST00000509989 NCOA5Q9HCD5 579 aaKnown RBP15.71■□□□□ 0.11
SNF8-206ENST00000509989 DUSP11O75319 330 aaKnown RBP15.7■□□□□ 0.1
SNF8-206ENST00000509989 HMGB1P09429 215 aaKnown RBP15.7■□□□□ 0.1
SNF8-206ENST00000509989 CALM1P0DP23 149 aa15.7■□□□□ 0.1
SNF8-206ENST00000509989 CALM2P0DP24 149 aa15.7■□□□□ 0.1
SNF8-206ENST00000509989 CALM3P0DP25 149 aa15.7■□□□□ 0.1
SNF8-206ENST00000509989 FCHSD1Q86WN1 690 aa15.7■□□□□ 0.1
SNF8-206ENST00000509989 PPP1R13LQ8WUF5 828 aa15.7■□□□□ 0.1
SNF8-206ENST00000509989 RMDN3Q96TC7 470 aa15.7■□□□□ 0.1
SNF8-206ENST00000509989 UPF3AQ9H1J1 476 aaKnown RBP15.7■□□□□ 0.1
SNF8-206ENST00000509989 PXMP2Q9NR77 195 aa15.7■□□□□ 0.1
SNF8-206ENST00000509989 ADD3Q9UEY8 706 aaKnown RBP15.7■□□□□ 0.1
SNF8-206ENST00000509989 PNMA2Q9UL42 364 aa15.7■□□□□ 0.1
SNF8-206ENST00000509989 ZMYND8Q9ULU4 1186 aaPredicted RBP15.7■□□□□ 0.1
SNF8-206ENST00000509989 LTBP2Q14767 1821 aa15.69■□□□□ 0.1
SNF8-206ENST00000509989 RBM47A0AV96 593 aaKnown RBP15.69■□□□□ 0.1
SNF8-206ENST00000509989 MEIS2O14770 477 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms