RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 TCAF1Q9Y4C2 921 aa4.44□□□□□ -1.7
XRCC4-204ENST00000509268 MUSKO15146 869 aa4.44□□□□□ -1.7
XRCC4-204ENST00000509268 TACR1P25103 407 aa4.44□□□□□ -1.7
XRCC4-204ENST00000509268 POLR2BP30876 1174 aaKnown RBP4.44□□□□□ -1.7
XRCC4-204ENST00000509268 R3HDM1Q15032 1099 aaKnown RBP4.44□□□□□ -1.7
XRCC4-204ENST00000509268 CWF19L2Q2TBE0 894 aaKnown RBP4.44□□□□□ -1.7
XRCC4-204ENST00000509268 SNAP47Q5SQN1 464 aa4.44□□□□□ -1.7
XRCC4-204ENST00000509268 MCTP2Q6DN12 878 aa4.44□□□□□ -1.7
XRCC4-204ENST00000509268 OVOS1Q6IE37 1185 aa4.44□□□□□ -1.7
XRCC4-204ENST00000509268 DDX11Q96FC9 970 aa4.44□□□□□ -1.7
XRCC4-204ENST00000509268 PTCHD1Q96NR3 888 aa4.44□□□□□ -1.7
XRCC4-204ENST00000509268 ZNF585AQ6P3V2 769 aa4.43□□□□□ -1.7
XRCC4-204ENST00000509268 NLRC3Q7RTR2 1065 aa4.43□□□□□ -1.7
XRCC4-204ENST00000509268 PALM2Q8IXS6 379 aa4.43□□□□□ -1.7
XRCC4-204ENST00000509268 C7orf61Q8IZ16 206 aa4.43□□□□□ -1.7
XRCC4-204ENST00000509268 ATG4CQ96DT6 458 aa4.43□□□□□ -1.7
XRCC4-204ENST00000509268 CHFRQ96EP1 664 aa4.43□□□□□ -1.7
XRCC4-204ENST00000509268 GORASP1Q9BQQ3 440 aa4.43□□□□□ -1.7
XRCC4-204ENST00000509268 ZNF341Q9BYN7 854 aa4.43□□□□□ -1.7
XRCC4-204ENST00000509268 BCAS3Q9H6U6 928 aa4.43□□□□□ -1.7
XRCC4-204ENST00000509268 PCDHB14Q9Y5E9 798 aa4.43□□□□□ -1.7
XRCC4-204ENST00000509268 GPR42O15529 346 aa4.42□□□□□ -1.7
XRCC4-204ENST00000509268 GBP2P32456 591 aaPredicted RBP4.42□□□□□ -1.7
XRCC4-204ENST00000509268 C9orf131Q5VYM1 1079 aa4.42□□□□□ -1.7
XRCC4-204ENST00000509268 FAM196AQ6ZSG2 479 aa4.42□□□□□ -1.7
XRCC4-204ENST00000509268 TMEM192Q8IY95 271 aa4.42□□□□□ -1.7
XRCC4-204ENST00000509268 AMER2Q8N7J2 671 aa4.42□□□□□ -1.7
XRCC4-204ENST00000509268 GOLM1Q8NBJ4 401 aa4.42□□□□□ -1.7
XRCC4-204ENST00000509268 LRRC3Q9BY71 257 aa4.42□□□□□ -1.7
XRCC4-204ENST00000509268 C1orf115Q9H7X2 142 aa4.42□□□□□ -1.7
XRCC4-204ENST00000509268 EHMT1Q9H9B1 1298 aa4.42□□□□□ -1.7
XRCC4-204ENST00000509268 B4GALT3O60512 393 aa4.41□□□□□ -1.7
XRCC4-204ENST00000509268 ACRP10323 421 aa4.41□□□□□ -1.7
XRCC4-204ENST00000509268 EPHB4P54760 987 aa4.41□□□□□ -1.7
XRCC4-204ENST00000509268 FBXO27Q8NI29 283 aa4.41□□□□□ -1.7
XRCC4-204ENST00000509268 CEP89Q96ST8 783 aa4.41□□□□□ -1.7
XRCC4-204ENST00000509268 DUSP9Q99956 384 aaKnown RBP4.41□□□□□ -1.7
XRCC4-204ENST00000509268 PATE3B3GLJ2 98 aa4.4□□□□□ -1.7
XRCC4-204ENST00000509268 C8BP07358 591 aa4.4□□□□□ -1.7
XRCC4-204ENST00000509268 PPP2CBP62714 309 aa4.4□□□□□ -1.7
XRCC4-204ENST00000509268 PPP2CAP67775 309 aa4.4□□□□□ -1.7
XRCC4-204ENST00000509268 DPTQ07507 201 aa4.4□□□□□ -1.7
XRCC4-204ENST00000509268 HNRNPA0Q13151 305 aaKnown RBP4.4□□□□□ -1.7
XRCC4-204ENST00000509268 LRRFIP1Q32MZ4 808 aaKnown RBP4.4□□□□□ -1.7
XRCC4-204ENST00000509268 SPDYAQ5MJ70 313 aa4.4□□□□□ -1.7
XRCC4-204ENST00000509268 PRR31Q5SQ13 230 aa4.4□□□□□ -1.7
XRCC4-204ENST00000509268 LZTR1Q8N653 840 aa4.4□□□□□ -1.7
XRCC4-204ENST00000509268 DHRS1Q96LJ7 313 aa4.4□□□□□ -1.7
XRCC4-204ENST00000509268 SLC6A18Q96N87 628 aa4.4□□□□□ -1.7
XRCC4-204ENST00000509268 BRMS1Q9HCU9 246 aa4.4□□□□□ -1.7
XRCC4-204ENST00000509268 TNFRSF10CO14798 259 aa4.4□□□□□ -1.71
XRCC4-204ENST00000509268 ZNF623O75123 536 aa4.4□□□□□ -1.71
XRCC4-204ENST00000509268 GARTP22102 1010 aa4.4□□□□□ -1.71
XRCC4-204ENST00000509268 ABHD18Q0P651 414 aa4.4□□□□□ -1.71
XRCC4-204ENST00000509268 FOXE3Q13461 319 aa4.4□□□□□ -1.71
XRCC4-204ENST00000509268 ANKRD39Q53RE8 183 aa4.4□□□□□ -1.71
XRCC4-204ENST00000509268 FCRL3Q96P31 734 aaPredicted RBP4.4□□□□□ -1.71
XRCC4-204ENST00000509268 RXFP1Q9HBX9 757 aa4.4□□□□□ -1.71
XRCC4-204ENST00000509268 TNFRSF18Q9Y5U5 241 aa4.4□□□□□ -1.71
XRCC4-204ENST00000509268 NPIPB8E9PQR5 432 aa4.39□□□□□ -1.71
XRCC4-204ENST00000509268 F6X3S4 739 aa4.39□□□□□ -1.71
XRCC4-204ENST00000509268 H0Y8X5 98 aa4.39□□□□□ -1.71
XRCC4-204ENST00000509268 DDX3XO00571 662 aaKnown RBP eCLIP4.39□□□□□ -1.71
XRCC4-204ENST00000509268 NME1P15531 152 aaKnown RBP4.39□□□□□ -1.71
XRCC4-204ENST00000509268 FAM160A1Q05DH4 1040 aa4.39□□□□□ -1.71
XRCC4-204ENST00000509268 MIIPQ5JXC2 388 aa4.39□□□□□ -1.71
XRCC4-204ENST00000509268 SLFN13Q68D06 897 aa4.39□□□□□ -1.71
XRCC4-204ENST00000509268 ARHGEF18Q6ZSZ5 1173 aa4.39□□□□□ -1.71
XRCC4-204ENST00000509268 IGDCC4Q8TDY8 1250 aa4.39□□□□□ -1.71
XRCC4-204ENST00000509268 WWC2-AS2Q96NR7 200 aa4.39□□□□□ -1.71
XRCC4-204ENST00000509268 TLR3O15455 904 aaKnown RBP4.38□□□□□ -1.71
XRCC4-204ENST00000509268 BRD1O95696 1058 aa4.38□□□□□ -1.71
XRCC4-204ENST00000509268 POU4F1Q01851 419 aa4.38□□□□□ -1.71
XRCC4-204ENST00000509268 NOL9Q5SY16 702 aaKnown RBP4.38□□□□□ -1.71
XRCC4-204ENST00000509268 CCDC144CPQ8IYA2 1237 aa4.38□□□□□ -1.71
XRCC4-204ENST00000509268 SUCOQ9UBS9 1254 aaKnown RBP4.38□□□□□ -1.71
XRCC4-204ENST00000509268 SF3B6Q9Y3B4 125 aaKnown RBP4.38□□□□□ -1.71
XRCC4-204ENST00000509268 SHOXO15266 292 aa4.37□□□□□ -1.71
XRCC4-204ENST00000509268 PPFIA2O75334 1257 aa4.37□□□□□ -1.71
XRCC4-204ENST00000509268 NANOS3P60323 173 aaKnown RBP4.37□□□□□ -1.71
XRCC4-204ENST00000509268 HS1BP3Q53T59 392 aa4.37□□□□□ -1.71
XRCC4-204ENST00000509268 PKN3Q6P5Z2 889 aa4.37□□□□□ -1.71
XRCC4-204ENST00000509268 ETV3LQ6ZN32 361 aa4.37□□□□□ -1.71
XRCC4-204ENST00000509268 REXO1Q8N1G1 1221 aaKnown RBP4.37□□□□□ -1.71
XRCC4-204ENST00000509268 SMARCC1Q92922 1105 aaPredicted RBP4.37□□□□□ -1.71
XRCC4-204ENST00000509268 JADE2Q9NQC1 790 aa4.37□□□□□ -1.71
XRCC4-204ENST00000509268 KCNQ5Q9NR82 932 aa4.37□□□□□ -1.71
XRCC4-204ENST00000509268 FHOD1Q9Y613 1164 aa4.37□□□□□ -1.71
XRCC4-204ENST00000509268 PCSK5Q92824 1860 aa4.37□□□□□ -1.71
XRCC4-204ENST00000509268 MINDY4BA8MYZ0 360 aa4.36□□□□□ -1.71
XRCC4-204ENST00000509268 CYP1A1P04798 512 aaPredicted RBP4.36□□□□□ -1.71
XRCC4-204ENST00000509268 DAB2P98082 770 aa4.36□□□□□ -1.71
XRCC4-204ENST00000509268 INTS3Q68E01 1043 aaKnown RBP4.36□□□□□ -1.71
XRCC4-204ENST00000509268 RCSD1Q6JBY9 416 aa4.36□□□□□ -1.71
XRCC4-204ENST00000509268 ZC3H18Q86VM9 953 aaKnown RBP4.36□□□□□ -1.71
XRCC4-204ENST00000509268 MTA3Q9BTC8 594 aa4.36□□□□□ -1.71
XRCC4-204ENST00000509268 NGRNQ9NPE2 291 aaKnown RBP4.36□□□□□ -1.71
XRCC4-204ENST00000509268 RNF19AQ9NV58 838 aa4.36□□□□□ -1.71
XRCC4-204ENST00000509268 MEIS3P2A8K0S8 358 aa4.36□□□□□ -1.71
XRCC4-204ENST00000509268 CTSHP09668 335 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms