RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 GNASQ5JWF2 1037 aa17.28■□□□□ 0.36
UBE2D3-228ENST00000508974 CCSAPQ6IQ19 270 aaPredicted RBP17.28■□□□□ 0.36
UBE2D3-228ENST00000508974 TLK2Q86UE8 772 aa17.28■□□□□ 0.36
UBE2D3-228ENST00000508974 TSEN34Q9BSV6 310 aaKnown RBP17.28■□□□□ 0.36
UBE2D3-228ENST00000508974 UPF3AQ9H1J1 476 aaKnown RBP17.28■□□□□ 0.36
UBE2D3-228ENST00000508974 JMJD4Q9H9V9 463 aa17.28■□□□□ 0.36
UBE2D3-228ENST00000508974 PDLIM7Q9NR12 457 aa17.28■□□□□ 0.36
UBE2D3-228ENST00000508974 ADD3Q9UEY8 706 aaKnown RBP17.28■□□□□ 0.36
UBE2D3-228ENST00000508974 MOXD2PA6NHM9 499 aa17.27■□□□□ 0.36
UBE2D3-228ENST00000508974 KLRF2D3W0D1 207 aa17.27■□□□□ 0.36
UBE2D3-228ENST00000508974 WTAPQ15007 396 aa17.27■□□□□ 0.36
UBE2D3-228ENST00000508974 TAPT1Q6NXT6 567 aa17.27■□□□□ 0.36
UBE2D3-228ENST00000508974 FBXO11Q86XK2 927 aa17.27■□□□□ 0.36
UBE2D3-228ENST00000508974 TDHQ8IZJ6 230 aa17.27■□□□□ 0.36
UBE2D3-228ENST00000508974 NUP133Q8WUM0 1156 aa17.27■□□□□ 0.36
UBE2D3-228ENST00000508974 TBC1D5Q92609 795 aa17.27■□□□□ 0.36
UBE2D3-228ENST00000508974 ESYT1Q9BSJ8 1104 aa17.27■□□□□ 0.36
UBE2D3-228ENST00000508974 ANO2Q9NQ90 1003 aa17.27■□□□□ 0.36
UBE2D3-228ENST00000508974 PNMA2Q9UL42 364 aa17.27■□□□□ 0.36
UBE2D3-228ENST00000508974 ABCB11O95342 1321 aa17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 TRIM43BA6NCK2 446 aa17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 DYNC1LI2O43237 492 aaPredicted RBP17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 CST5P28325 142 aaPredicted RBP17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 ANTXR2P58335 489 aa17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 PDE4DQ08499 809 aa17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 SART3Q15020 963 aaKnown RBP17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 TMEM67Q5HYA8 995 aa17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 C1orf53Q5VUE5 145 aa17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 HOMER1Q86YM7 354 aa17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 PCSK9Q8NBP7 692 aaKnown RBP17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 BADQ92934 168 aa17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 TRIM43Q96BQ3 446 aaPredicted RBP17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 GLT1D1Q96MS3 346 aa17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 LSG1Q9H089 658 aaKnown RBP17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 AP5M1Q9H0R1 490 aa17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 VTA1Q9NP79 307 aa17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 MAD2L2Q9UI95 211 aa17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 GNEQ9Y223 722 aaKnown RBP17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 BAZ2BQ9UIF8 2168 aaKnown RBP17.26■□□□□ 0.35
UBE2D3-228ENST00000508974 CTAGE5O15320 804 aa17.25■□□□□ 0.35
UBE2D3-228ENST00000508974 CLTBP09497 229 aa17.25■□□□□ 0.35
UBE2D3-228ENST00000508974 MB21D2Q8IYB1 491 aaPredicted RBP17.25■□□□□ 0.35
UBE2D3-228ENST00000508974 MORC4Q8TE76 937 aa17.25■□□□□ 0.35
UBE2D3-228ENST00000508974 GPHNQ9NQX3 736 aaPredicted RBP17.25■□□□□ 0.35
UBE2D3-228ENST00000508974 COL9A3Q14050 684 aaPredicted RBP17.24■□□□□ 0.35
UBE2D3-228ENST00000508974 GRM4Q14833 912 aa17.24■□□□□ 0.35
UBE2D3-228ENST00000508974 FSCN1Q16658 493 aaKnown RBP17.24■□□□□ 0.35
UBE2D3-228ENST00000508974 BMP2KLQ5H9B9 411 aa17.24■□□□□ 0.35
UBE2D3-228ENST00000508974 IQSEC1Q6DN90 963 aa17.24■□□□□ 0.35
UBE2D3-228ENST00000508974 CXCL17Q6UXB2 119 aa17.24■□□□□ 0.35
UBE2D3-228ENST00000508974 PIBF1Q8WXW3 757 aa17.24■□□□□ 0.35
UBE2D3-228ENST00000508974 CCDC136Q96JN2 1154 aa17.24■□□□□ 0.35
UBE2D3-228ENST00000508974 MYL10Q9BUA6 226 aa17.24■□□□□ 0.35
UBE2D3-228ENST00000508974 WDR11Q9BZH6 1224 aa17.24■□□□□ 0.35
UBE2D3-228ENST00000508974 TMEM39AQ9NV64 488 aa17.24■□□□□ 0.35
UBE2D3-228ENST00000508974 KIAA1217Q5T5P2 1943 aa17.23■□□□□ 0.35
UBE2D3-228ENST00000508974 PALM3A6NDB9 673 aaPredicted RBP17.23■□□□□ 0.35
UBE2D3-228ENST00000508974 SLC27A2O14975 620 aa17.23■□□□□ 0.35
UBE2D3-228ENST00000508974 PPP1R11O60927 126 aaPredicted RBP17.23■□□□□ 0.35
UBE2D3-228ENST00000508974 CFBP00751 764 aa17.23■□□□□ 0.35
UBE2D3-228ENST00000508974 ITGB8P26012 769 aa17.23■□□□□ 0.35
UBE2D3-228ENST00000508974 TAAR1Q96RJ0 339 aa17.23■□□□□ 0.35
UBE2D3-228ENST00000508974 MPHOSPH6Q99547 160 aaKnown RBP17.23■□□□□ 0.35
UBE2D3-228ENST00000508974 COL20A1Q9P218 1284 aa17.23■□□□□ 0.35
UBE2D3-228ENST00000508974 MRPL11Q9Y3B7 192 aaKnown RBP17.23■□□□□ 0.35
UBE2D3-228ENST00000508974 A0A0U1RQG5 324 aaPredicted RBP17.22■□□□□ 0.35
UBE2D3-228ENST00000508974 DCDC2CA8MYV0 355 aa17.22■□□□□ 0.35
UBE2D3-228ENST00000508974 PRC1O43663 620 aa17.22■□□□□ 0.35
UBE2D3-228ENST00000508974 RAG1P15918 1043 aa17.22■□□□□ 0.35
UBE2D3-228ENST00000508974 FAAP100Q0VG06 881 aa17.22■□□□□ 0.35
UBE2D3-228ENST00000508974 SLC35G1Q2M3R5 365 aa17.22■□□□□ 0.35
UBE2D3-228ENST00000508974 CREB3L3Q68CJ9 461 aa17.22■□□□□ 0.35
UBE2D3-228ENST00000508974 CASC1Q6TDU7 716 aa17.22■□□□□ 0.35
UBE2D3-228ENST00000508974 CATIPQ7Z7H3 387 aa17.22■□□□□ 0.35
UBE2D3-228ENST00000508974 DNERQ8NFT8 737 aa17.22■□□□□ 0.35
UBE2D3-228ENST00000508974 SYTL5Q8TDW5 730 aaPredicted RBP17.22■□□□□ 0.35
UBE2D3-228ENST00000508974 IGDCC4Q8TDY8 1250 aa17.22■□□□□ 0.35
UBE2D3-228ENST00000508974 PIGSQ96S52 555 aa17.22■□□□□ 0.35
UBE2D3-228ENST00000508974 AMNQ9BXJ7 453 aa17.22■□□□□ 0.35
UBE2D3-228ENST00000508974 ELP1O95163 1332 aa17.21■□□□□ 0.35
UBE2D3-228ENST00000508974 ZBTB5O15062 677 aa17.21■□□□□ 0.35
UBE2D3-228ENST00000508974 EIF2AK2P19525 551 aaKnown RBP17.21■□□□□ 0.35
UBE2D3-228ENST00000508974 PSMC6P62333 389 aa17.21■□□□□ 0.35
UBE2D3-228ENST00000508974 TROAPQ12815 778 aa17.21■□□□□ 0.35
UBE2D3-228ENST00000508974 PPP2R5BQ15173 497 aa17.21■□□□□ 0.35
UBE2D3-228ENST00000508974 DUSP28Q4G0W2 176 aa17.21■□□□□ 0.35
UBE2D3-228ENST00000508974 NFXL1Q6ZNB6 911 aa17.21■□□□□ 0.35
UBE2D3-228ENST00000508974 ANKRD33Q7Z3H0 272 aa17.21■□□□□ 0.35
UBE2D3-228ENST00000508974 MCF2L2Q86YR7 1114 aa17.21■□□□□ 0.35
UBE2D3-228ENST00000508974 RAB11FIP4Q86YS3 637 aa17.21■□□□□ 0.35
UBE2D3-228ENST00000508974 OR6J1Q8NGC5 347 aa17.21■□□□□ 0.35
UBE2D3-228ENST00000508974 COPS5Q92905 334 aa17.21■□□□□ 0.35
UBE2D3-228ENST00000508974 LRRC2Q9BYS8 371 aa17.21■□□□□ 0.35
UBE2D3-228ENST00000508974 LY9Q9HBG7 655 aa17.21■□□□□ 0.35
UBE2D3-228ENST00000508974 LOC102724159A0A0B4J2E5 919 aa17.2■□□□□ 0.34
UBE2D3-228ENST00000508974 ARVCFO00192 962 aa17.2■□□□□ 0.34
UBE2D3-228ENST00000508974 OPLAHO14841 1288 aa17.2■□□□□ 0.34
UBE2D3-228ENST00000508974 EDNRBP24530 442 aa17.2■□□□□ 0.34
UBE2D3-228ENST00000508974 MCM5P33992 734 aa17.2■□□□□ 0.34
UBE2D3-228ENST00000508974 PWP2Q15269 919 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 248.7 ms