RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 NOX5Q96PH1 765 aa7.7□□□□□ -1.18
TRAPPC13-209ENST00000508304 NOL6Q9H6R4 1146 aaKnown RBP7.7□□□□□ -1.18
TRAPPC13-209ENST00000508304 BCAS3Q9H6U6 928 aa7.7□□□□□ -1.18
TRAPPC13-209ENST00000508304 RXFP1Q9HBX9 757 aa7.7□□□□□ -1.18
TRAPPC13-209ENST00000508304 SPATA6Q9NWH7 488 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC13-209ENST00000508304 SMPD4Q9NXE4 827 aa7.7□□□□□ -1.18
TRAPPC13-209ENST00000508304 A0A087WZG4 1122 aa7.69□□□□□ -1.18
TRAPPC13-209ENST00000508304 ITGA4P13612 1032 aa7.69□□□□□ -1.18
TRAPPC13-209ENST00000508304 TRIM26Q12899 539 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC13-209ENST00000508304 UNC5AQ6ZN44 842 aa7.69□□□□□ -1.18
TRAPPC13-209ENST00000508304 ZNF761Q86XN6 746 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC13-209ENST00000508304 SMARCC2Q8TAQ2 1214 aa7.69□□□□□ -1.18
TRAPPC13-209ENST00000508304 ZDHHC15Q96MV8 337 aa7.69□□□□□ -1.18
TRAPPC13-209ENST00000508304 KRTAP3-1Q9BYR8 98 aa7.69□□□□□ -1.18
TRAPPC13-209ENST00000508304 NTMQ9P121 344 aa7.69□□□□□ -1.18
TRAPPC13-209ENST00000508304 FBLN5Q9UBX5 448 aa7.69□□□□□ -1.18
TRAPPC13-209ENST00000508304 SARSP49591 514 aaKnown RBP7.68□□□□□ -1.18
TRAPPC13-209ENST00000508304 SLC9A5Q14940 896 aa7.68□□□□□ -1.18
TRAPPC13-209ENST00000508304 CABP7Q86V35 215 aa7.68□□□□□ -1.18
TRAPPC13-209ENST00000508304 NETO2Q8NC67 525 aa7.68□□□□□ -1.18
TRAPPC13-209ENST00000508304 RBBP8NLQ8NC74 664 aaPredicted RBP7.68□□□□□ -1.18
TRAPPC13-209ENST00000508304 MCMBPQ9BTE3 642 aa7.68□□□□□ -1.18
TRAPPC13-209ENST00000508304 FAM86C1Q9NVL1 165 aa7.68□□□□□ -1.18
TRAPPC13-209ENST00000508304 DIS3Q9Y2L1 958 aaKnown RBP7.68□□□□□ -1.18
TRAPPC13-209ENST00000508304 MATN3O15232 486 aa7.67□□□□□ -1.18
TRAPPC13-209ENST00000508304 CBFA2T2O43439 604 aa7.67□□□□□ -1.18
TRAPPC13-209ENST00000508304 AKAP8O43823 692 aaKnown RBP7.67□□□□□ -1.18
TRAPPC13-209ENST00000508304 PDIA4P13667 645 aaKnown RBP7.67□□□□□ -1.18
TRAPPC13-209ENST00000508304 GUCY2CP25092 1073 aa7.67□□□□□ -1.18
TRAPPC13-209ENST00000508304 CACNB2Q08289 660 aaPredicted RBP7.67□□□□□ -1.18
TRAPPC13-209ENST00000508304 EEF1DP3Q658K8 133 aa7.67□□□□□ -1.18
TRAPPC13-209ENST00000508304 ZNF214Q9UL59 606 aaPredicted RBP7.67□□□□□ -1.18
TRAPPC13-209ENST00000508304 AURKAO14965 403 aa7.66□□□□□ -1.18
TRAPPC13-209ENST00000508304 ZXDAP98168 799 aa7.66□□□□□ -1.18
TRAPPC13-209ENST00000508304 LZTR1Q8N653 840 aa7.66□□□□□ -1.18
TRAPPC13-209ENST00000508304 LINC00482Q8N8I6 264 aa7.66□□□□□ -1.18
TRAPPC13-209ENST00000508304 PEX11GQ96HA9 241 aa7.66□□□□□ -1.18
TRAPPC13-209ENST00000508304 FERD3LQ96RJ6 166 aa7.66□□□□□ -1.18
TRAPPC13-209ENST00000508304 MTA3Q9BTC8 594 aa7.66□□□□□ -1.18
TRAPPC13-209ENST00000508304 C1QTNF3Q9BXJ4 246 aa7.66□□□□□ -1.18
TRAPPC13-209ENST00000508304 NUDT5Q9UKK9 219 aa7.66□□□□□ -1.18
TRAPPC13-209ENST00000508304 RWDD3Q9Y3V2 267 aa7.66□□□□□ -1.18
TRAPPC13-209ENST00000508304 C1QTNF3-AMACRE9PGA6 284 aa7.65□□□□□ -1.18
TRAPPC13-209ENST00000508304 PPP1R11O60927 126 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC13-209ENST00000508304 TCEAL1Q15170 157 aa7.65□□□□□ -1.18
TRAPPC13-209ENST00000508304 CPZQ66K79 652 aa7.65□□□□□ -1.18
TRAPPC13-209ENST00000508304 TTC9BQ8N6N2 239 aa7.65□□□□□ -1.18
TRAPPC13-209ENST00000508304 ZBTB7AO95365 584 aa7.64□□□□□ -1.19
TRAPPC13-209ENST00000508304 PPP2R5DQ14738 602 aa7.64□□□□□ -1.19
TRAPPC13-209ENST00000508304 CCDC27Q2M243 656 aa7.64□□□□□ -1.19
TRAPPC13-209ENST00000508304 LDLRAD1Q5T700 205 aa7.64□□□□□ -1.19
TRAPPC13-209ENST00000508304 RUFY4Q6ZNE9 571 aa7.64□□□□□ -1.19
TRAPPC13-209ENST00000508304 TTLL7Q6ZT98 887 aa7.64□□□□□ -1.19
TRAPPC13-209ENST00000508304 ADAMTS17Q8TE56 1095 aa7.64□□□□□ -1.19
TRAPPC13-209ENST00000508304 ZBTB8AQ96BR9 441 aa7.64□□□□□ -1.19
TRAPPC13-209ENST00000508304 SAMD11Q96NU1 681 aa7.64□□□□□ -1.19
TRAPPC13-209ENST00000508304 PLATP00750 562 aa7.63□□□□□ -1.19
TRAPPC13-209ENST00000508304 WHRNQ9P202 907 aa7.63□□□□□ -1.19
TRAPPC13-209ENST00000508304 LTBP3Q9NS15 1303 aa7.62□□□□□ -1.19
TRAPPC13-209ENST00000508304 STXBP3O00186 592 aa7.62□□□□□ -1.19
TRAPPC13-209ENST00000508304 ZNF20P17024 532 aa7.62□□□□□ -1.19
TRAPPC13-209ENST00000508304 TBC1D10BQ4KMP7 808 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC13-209ENST00000508304 ZNF326Q5BKZ1 582 aaKnown RBP7.62□□□□□ -1.19
TRAPPC13-209ENST00000508304 WWC2Q6AWC2 1192 aa7.62□□□□□ -1.19
TRAPPC13-209ENST00000508304 RNF34Q969K3 372 aa7.62□□□□□ -1.19
TRAPPC13-209ENST00000508304 DDX11Q96FC9 970 aa7.62□□□□□ -1.19
TRAPPC13-209ENST00000508304 HAUS7Q99871 368 aa7.62□□□□□ -1.19
TRAPPC13-209ENST00000508304 BCL2L13Q9BXK5 485 aa7.62□□□□□ -1.19
TRAPPC13-209ENST00000508304 PPT2Q9UMR5 302 aa7.62□□□□□ -1.19
TRAPPC13-209ENST00000508304 SMAD4Q13485 552 aaKnown RBP7.61□□□□□ -1.19
TRAPPC13-209ENST00000508304 ADCY4Q8NFM4 1077 aa7.61□□□□□ -1.19
TRAPPC13-209ENST00000508304 GIPC2Q8TF65 315 aa7.61□□□□□ -1.19
TRAPPC13-209ENST00000508304 C8orf49Q96NF6 230 aa7.61□□□□□ -1.19
TRAPPC13-209ENST00000508304 KLHL25Q9H0H3 589 aa7.61□□□□□ -1.19
TRAPPC13-209ENST00000508304 GULP1Q9UBP9 304 aa7.61□□□□□ -1.19
TRAPPC13-209ENST00000508304 SMARCA5O60264 1052 aaPredicted RBP7.6□□□□□ -1.19
TRAPPC13-209ENST00000508304 C8BP07358 591 aa7.6□□□□□ -1.19
TRAPPC13-209ENST00000508304 CYP2C8P10632 490 aa7.6□□□□□ -1.19
TRAPPC13-209ENST00000508304 FBXW10Q5XX13 1052 aa7.6□□□□□ -1.19
TRAPPC13-209ENST00000508304 CPNE8Q86YQ8 564 aa7.6□□□□□ -1.19
TRAPPC13-209ENST00000508304 LOXL4Q96JB6 756 aa7.6□□□□□ -1.19
TRAPPC13-209ENST00000508304 GORASP1Q9BQQ3 440 aa7.6□□□□□ -1.19
TRAPPC13-209ENST00000508304 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.6□□□□□ -1.19
TRAPPC13-209ENST00000508304 BACE2Q9Y5Z0 518 aa7.6□□□□□ -1.19
TRAPPC13-209ENST00000508304 VAMP4O75379 141 aa7.59□□□□□ -1.19
TRAPPC13-209ENST00000508304 RPL13P26373 211 aaKnown RBP7.59□□□□□ -1.19
TRAPPC13-209ENST00000508304 THBS2P35442 1172 aa7.59□□□□□ -1.19
TRAPPC13-209ENST00000508304 SEPHS1P49903 392 aa7.59□□□□□ -1.19
TRAPPC13-209ENST00000508304 RGL3Q3MIN7 710 aa7.59□□□□□ -1.19
TRAPPC13-209ENST00000508304 TMEM87AQ8NBN3 555 aa7.59□□□□□ -1.19
TRAPPC13-209ENST00000508304 SSBP3Q9BWW4 388 aaPredicted RBP7.59□□□□□ -1.19
TRAPPC13-209ENST00000508304 C2orf71A6NGG8 1288 aa7.58□□□□□ -1.2
TRAPPC13-209ENST00000508304 DPY19L1Q2PZI1 675 aa7.58□□□□□ -1.2
TRAPPC13-209ENST00000508304 FAM26FQ5R3K3 315 aa7.58□□□□□ -1.2
TRAPPC13-209ENST00000508304 SLC16A11Q8NCK7 471 aa7.58□□□□□ -1.2
TRAPPC13-209ENST00000508304 C11orf84Q9BUA3 381 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC13-209ENST00000508304 GBP3Q9H0R5 595 aa7.58□□□□□ -1.2
TRAPPC13-209ENST00000508304 SIT1Q9Y3P8 196 aa7.58□□□□□ -1.2
TRAPPC13-209ENST00000508304 PAMP19021 973 aa7.57□□□□□ -1.2
TRAPPC13-209ENST00000508304 KIAA2012Q0VF49 1180 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms