RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 TBC1D5Q92609 795 aa18.98■□□□□ 0.63
DDR1-261ENST00000507901 PURBQ96QR8 312 aaKnown RBP18.98■□□□□ 0.63
DDR1-261ENST00000507901 PDRG1Q9NUG6 133 aa18.98■□□□□ 0.63
DDR1-261ENST00000507901 MRPL11Q9Y3B7 192 aaKnown RBP18.98■□□□□ 0.63
DDR1-261ENST00000507901 TNRC18O15417 2968 aaPredicted RBP18.97■□□□□ 0.63
DDR1-261ENST00000507901 ZNF865P0CJ78 1059 aaPredicted RBP18.97■□□□□ 0.63
DDR1-261ENST00000507901 ADD1P35611 737 aaKnown RBP18.97■□□□□ 0.63
DDR1-261ENST00000507901 METAP2P50579 478 aaKnown RBP eCLIP18.97■□□□□ 0.63
DDR1-261ENST00000507901 HSD17B4P51659 736 aa18.97■□□□□ 0.63
DDR1-261ENST00000507901 LHX8Q68G74 356 aa18.97■□□□□ 0.63
DDR1-261ENST00000507901 RNF207Q6ZRF8 634 aa18.97■□□□□ 0.63
DDR1-261ENST00000507901 RRP36Q96EU6 259 aaKnown RBP18.97■□□□□ 0.63
DDR1-261ENST00000507901 ZNF274Q96GC6 653 aaPredicted RBP18.97■□□□□ 0.63
DDR1-261ENST00000507901 HMX1Q9NP08 348 aaPredicted RBP18.97■□□□□ 0.63
DDR1-261ENST00000507901 COL20A1Q9P218 1284 aa18.97■□□□□ 0.63
DDR1-261ENST00000507901 PCDHA1Q9Y5I3 950 aa18.97■□□□□ 0.63
DDR1-261ENST00000507901 MKI67P46013 3256 aaKnown RBP18.97■□□□□ 0.63
DDR1-261ENST00000507901 LOC102724159A0A0B4J2E5 919 aa18.96■□□□□ 0.63
DDR1-261ENST00000507901 SGPL1O95470 568 aa18.96■□□□□ 0.63
DDR1-261ENST00000507901 CAPN2P17655 700 aa18.96■□□□□ 0.63
DDR1-261ENST00000507901 FGD1P98174 961 aa18.96■□□□□ 0.63
DDR1-261ENST00000507901 PWP2Q15269 919 aaKnown RBP18.96■□□□□ 0.63
DDR1-261ENST00000507901 UBE2Q1Q7Z7E8 422 aa18.96■□□□□ 0.63
DDR1-261ENST00000507901 SAMD3Q8N6K7 520 aa18.96■□□□□ 0.63
DDR1-261ENST00000507901 U2AF1L4Q8WU68 220 aaKnown RBP18.96■□□□□ 0.63
DDR1-261ENST00000507901 PTPDC1A2A3K4 754 aa18.95■□□□□ 0.62
DDR1-261ENST00000507901 EDNRBP24530 442 aa18.95■□□□□ 0.62
DDR1-261ENST00000507901 PRAMEF19Q5SWL8 479 aa18.95■□□□□ 0.62
DDR1-261ENST00000507901 ARMCX2Q7L311 632 aa18.95■□□□□ 0.62
DDR1-261ENST00000507901 MCF2L2Q86YR7 1114 aa18.95■□□□□ 0.62
DDR1-261ENST00000507901 SYTL5Q8TDW5 730 aaPredicted RBP18.95■□□□□ 0.62
DDR1-261ENST00000507901 MNX1P50219 401 aaPredicted RBP18.94■□□□□ 0.62
DDR1-261ENST00000507901 ALDH5A1P51649 535 aaPredicted RBP18.94■□□□□ 0.62
DDR1-261ENST00000507901 TRAF1Q13077 416 aa18.94■□□□□ 0.62
DDR1-261ENST00000507901 DNERQ8NFT8 737 aa18.94■□□□□ 0.62
DDR1-261ENST00000507901 DEFB118Q96PH6 123 aa18.94■□□□□ 0.62
DDR1-261ENST00000507901 C22orf23Q9BZE7 217 aa18.94■□□□□ 0.62
DDR1-261ENST00000507901 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.94■□□□□ 0.62
DDR1-261ENST00000507901 MAP3K20Q9NYL2 800 aaKnown RBP18.94■□□□□ 0.62
DDR1-261ENST00000507901 TPCN1Q9ULQ1 816 aa18.94■□□□□ 0.62
DDR1-261ENST00000507901 DDX49Q9Y6V7 483 aaKnown RBP18.94■□□□□ 0.62
DDR1-261ENST00000507901 CCDC196A0A1B0GTZ2 297 aa18.93■□□□□ 0.62
DDR1-261ENST00000507901 hCG_1642624A0A1W2PR95 340 aa18.93■□□□□ 0.62
DDR1-261ENST00000507901 SEPT4O43236 478 aa18.93■□□□□ 0.62
DDR1-261ENST00000507901 AK2P54819 239 aa18.93■□□□□ 0.62
DDR1-261ENST00000507901 CCDC82Q8N4S0 544 aa18.93■□□□□ 0.62
DDR1-261ENST00000507901 PIBF1Q8WXW3 757 aa18.93■□□□□ 0.62
DDR1-261ENST00000507901 LARP6Q9BRS8 491 aaKnown RBP18.93■□□□□ 0.62
DDR1-261ENST00000507901 DDX20Q9UHI6 824 aaKnown RBP18.93■□□□□ 0.62
DDR1-261ENST00000507901 OGDHLQ9ULD0 1010 aa18.93■□□□□ 0.62
DDR1-261ENST00000507901 PDE4DIPQ5VU43 2346 aa18.92■□□□□ 0.62
DDR1-261ENST00000507901 ASB14A6NK59 587 aa18.92■□□□□ 0.62
DDR1-261ENST00000507901 IFNAR1P17181 557 aa18.92■□□□□ 0.62
DDR1-261ENST00000507901 CALML3P27482 149 aa18.92■□□□□ 0.62
DDR1-261ENST00000507901 PKN1Q16512 942 aa18.92■□□□□ 0.62
DDR1-261ENST00000507901 TYW1BQ6NUM6 668 aa18.92■□□□□ 0.62
DDR1-261ENST00000507901 BACH2Q9BYV9 841 aa18.92■□□□□ 0.62
DDR1-261ENST00000507901 ABHD16BQ9H3Z7 469 aa18.92■□□□□ 0.62
DDR1-261ENST00000507901 NCOA5Q9HCD5 579 aaKnown RBP18.92■□□□□ 0.62
DDR1-261ENST00000507901 SEC63Q9UGP8 760 aaKnown RBP18.92■□□□□ 0.62
DDR1-261ENST00000507901 KIAA1217Q5T5P2 1943 aa18.92■□□□□ 0.62
DDR1-261ENST00000507901 PIK3CDO00329 1044 aa18.91■□□□□ 0.62
DDR1-261ENST00000507901 ADCY6O43306 1168 aa18.91■□□□□ 0.62
DDR1-261ENST00000507901 PRPF3O43395 683 aaKnown RBP18.91■□□□□ 0.62
DDR1-261ENST00000507901 NEK4P51957 841 aa18.91■□□□□ 0.62
DDR1-261ENST00000507901 ACVR2BQ13705 512 aa18.91■□□□□ 0.62
DDR1-261ENST00000507901 WWC2Q6AWC2 1192 aa18.91■□□□□ 0.62
DDR1-261ENST00000507901 TAAR1Q96RJ0 339 aa18.91■□□□□ 0.62
DDR1-261ENST00000507901 ADD3Q9UEY8 706 aaKnown RBP18.91■□□□□ 0.62
DDR1-261ENST00000507901 V9GY48 417 aaPredicted RBP18.91■□□□□ 0.62
DDR1-261ENST00000507901 FRMPD4Q14CM0 1322 aa18.91■□□□□ 0.62
DDR1-261ENST00000507901 MEIS2O14770 477 aa18.9■□□□□ 0.62
DDR1-261ENST00000507901 MSCO60682 206 aa18.9■□□□□ 0.62
DDR1-261ENST00000507901 PFKFB2O60825 505 aa18.9■□□□□ 0.62
DDR1-261ENST00000507901 CCT2P78371 535 aaKnown RBP18.9■□□□□ 0.62
DDR1-261ENST00000507901 SCRN1Q12765 414 aa18.9■□□□□ 0.62
DDR1-261ENST00000507901 PFKFB3Q16875 520 aaPredicted RBP18.9■□□□□ 0.62
DDR1-261ENST00000507901 TAPT1Q6NXT6 567 aa18.9■□□□□ 0.62
DDR1-261ENST00000507901 TBC1D32Q96NH3 1257 aa18.9■□□□□ 0.62
DDR1-261ENST00000507901 NAP1L2Q9ULW6 460 aaPredicted RBP18.9■□□□□ 0.62
DDR1-261ENST00000507901 RBM47A0AV96 593 aaKnown RBP18.89■□□□□ 0.61
DDR1-261ENST00000507901 hCG_1984214I3L0E3 225 aa18.89■□□□□ 0.61
DDR1-261ENST00000507901 STXBP3O00186 592 aa18.89■□□□□ 0.61
DDR1-261ENST00000507901 LARGE1O95461 756 aa18.89■□□□□ 0.61
DDR1-261ENST00000507901 CFBP00751 764 aa18.89■□□□□ 0.61
DDR1-261ENST00000507901 ANKRD1Q15327 319 aa18.89■□□□□ 0.61
DDR1-261ENST00000507901 PPP1R18Q6NYC8 613 aa18.89■□□□□ 0.61
DDR1-261ENST00000507901 ZNF713Q8N859 430 aaPredicted RBP18.89■□□□□ 0.61
DDR1-261ENST00000507901 ANKLE1Q8NAG6 615 aa18.89■□□□□ 0.61
DDR1-261ENST00000507901 GPKOWQ92917 476 aaPredicted RBP eCLIP18.89■□□□□ 0.61
DDR1-261ENST00000507901 RNF26Q9BY78 433 aaPredicted RBP18.89■□□□□ 0.61
DDR1-261ENST00000507901 CNPY2Q9Y2B0 182 aa18.89■□□□□ 0.61
DDR1-261ENST00000507901 GCOM1H8Y6P7 765 aaPredicted RBP18.88■□□□□ 0.61
DDR1-261ENST00000507901 TFRCP02786 760 aaKnown RBP18.88■□□□□ 0.61
DDR1-261ENST00000507901 POLR2MP0CAP2 368 aa18.88■□□□□ 0.61
DDR1-261ENST00000507901 AKR1A1P14550 325 aa18.88■□□□□ 0.61
DDR1-261ENST00000507901 HOXA13P31271 388 aaPredicted RBP18.88■□□□□ 0.61
DDR1-261ENST00000507901 ST3GAL1Q11201 340 aa18.88■□□□□ 0.61
DDR1-261ENST00000507901 ME3Q16798 604 aa18.88■□□□□ 0.61
DDR1-261ENST00000507901 NSUN6Q8TEA1 469 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms