RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 UBE2SQ16763 222 aa19.88■□□□□ 0.77
SFXN1-208ENST00000507823 AGBL3Q8NEM8 1001 aa19.88■□□□□ 0.77
SFXN1-208ENST00000507823 TRIM9Q9C026 710 aa19.88■□□□□ 0.77
SFXN1-208ENST00000507823 CYP3A7-CYP3A51PA0A087WV96 503 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 CYP3A7P24462 503 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 PRCPP42785 496 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 SPAG1Q07617 926 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 CNNM4Q6P4Q7 775 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 MOXD1Q6UVY6 613 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 FCHSD1Q86WN1 690 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 CRYGNQ8WXF5 182 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 ZBED3Q96IU2 234 aaPredicted RBP19.87■□□□□ 0.77
SFXN1-208ENST00000507823 TBC1D12O60347 775 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 GH2P01242 217 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 TNNT1P13805 278 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 TNNI2P48788 182 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 GRB10Q13322 594 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 SF3B2Q13435 895 aaKnown RBP19.87■□□□□ 0.77
SFXN1-208ENST00000507823 TMEM266Q2M3C6 531 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 DEFB132Q7Z7B7 95 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 RASSF8Q8NHQ8 419 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 NELFBQ8WX92 580 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 C16orf45Q96MC5 204 aaPredicted RBP19.87■□□□□ 0.77
SFXN1-208ENST00000507823 RAB34Q9BZG1 259 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 GDAQ9Y2T3 454 aa19.87■□□□□ 0.77
SFXN1-208ENST00000507823 SLC26A4O43511 780 aa19.86■□□□□ 0.77
SFXN1-208ENST00000507823 USP11P51784 963 aa19.86■□□□□ 0.77
SFXN1-208ENST00000507823 AP3B2Q13367 1082 aa19.86■□□□□ 0.77
SFXN1-208ENST00000507823 DLGAP5Q15398 846 aa19.86■□□□□ 0.77
SFXN1-208ENST00000507823 HSP90AA4PQ58FG1 418 aa19.86■□□□□ 0.77
SFXN1-208ENST00000507823 CALML4Q96GE6 196 aa19.86■□□□□ 0.77
SFXN1-208ENST00000507823 ZNF277Q9NRM2 450 aaPredicted RBP19.86■□□□□ 0.77
SFXN1-208ENST00000507823 ZNRF3Q9ULT6 936 aa19.86■□□□□ 0.77
SFXN1-208ENST00000507823 PCDHA1Q9Y5I3 950 aa19.86■□□□□ 0.77
SFXN1-208ENST00000507823 TXKP42681 527 aa19.86■□□□□ 0.77
SFXN1-208ENST00000507823 TC2NQ8N9U0 490 aa19.86■□□□□ 0.77
SFXN1-208ENST00000507823 HAS1Q92839 578 aa19.86■□□□□ 0.77
SFXN1-208ENST00000507823 PNMA5Q96PV4 448 aa19.86■□□□□ 0.77
SFXN1-208ENST00000507823 LRWD1Q9UFC0 647 aa19.86■□□□□ 0.77
SFXN1-208ENST00000507823 ITIH6Q6UXX5 1313 aa19.85■□□□□ 0.77
SFXN1-208ENST00000507823 BRCA1P38398 1863 aaKnown RBP19.85■□□□□ 0.77
SFXN1-208ENST00000507823 H7C1D1 291 aa19.85■□□□□ 0.77
SFXN1-208ENST00000507823 RAD17O75943 681 aa19.85■□□□□ 0.77
SFXN1-208ENST00000507823 HOXA7P31268 230 aaPredicted RBP19.85■□□□□ 0.77
SFXN1-208ENST00000507823 AMPD3Q01432 767 aa19.85■□□□□ 0.77
SFXN1-208ENST00000507823 TMEM119Q4V9L6 283 aa19.85■□□□□ 0.77
SFXN1-208ENST00000507823 BLOC1S4Q9NUP1 217 aa19.85■□□□□ 0.77
SFXN1-208ENST00000507823 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.85■□□□□ 0.77
SFXN1-208ENST00000507823 PAXBP1Q9Y5B6 917 aa19.85■□□□□ 0.77
SFXN1-208ENST00000507823 FER1L6Q2WGJ9 1857 aa19.85■□□□□ 0.77
SFXN1-208ENST00000507823 KIF2AO00139 706 aaPredicted RBP19.85■□□□□ 0.77
SFXN1-208ENST00000507823 PPP1R2P41236 205 aa19.85■□□□□ 0.77
SFXN1-208ENST00000507823 TGFB2P61812 414 aa19.85■□□□□ 0.77
SFXN1-208ENST00000507823 SYDE2Q5VT97 1194 aa19.85■□□□□ 0.77
SFXN1-208ENST00000507823 FAM83AQ86UY5 434 aa19.85■□□□□ 0.77
SFXN1-208ENST00000507823 AMNQ9BXJ7 453 aa19.85■□□□□ 0.77
SFXN1-208ENST00000507823 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.85■□□□□ 0.77
SFXN1-208ENST00000507823 DDX25Q9UHL0 483 aaKnown RBP19.85■□□□□ 0.77
SFXN1-208ENST00000507823 A0A1W2PRG0 241 aa19.84■□□□□ 0.77
SFXN1-208ENST00000507823 MEIS2O14770 477 aa19.84■□□□□ 0.77
SFXN1-208ENST00000507823 BMP3P12645 472 aa19.84■□□□□ 0.77
SFXN1-208ENST00000507823 HYIQ5T013 277 aa19.84■□□□□ 0.77
SFXN1-208ENST00000507823 OGFOD1Q8N543 542 aa19.84■□□□□ 0.77
SFXN1-208ENST00000507823 PGAP2Q9UHJ9 254 aa19.84■□□□□ 0.77
SFXN1-208ENST00000507823 TUBB4AP04350 444 aa19.84■□□□□ 0.77
SFXN1-208ENST00000507823 MAP3K10Q02779 954 aa19.84■□□□□ 0.77
SFXN1-208ENST00000507823 DHTKD1Q96HY7 919 aaPredicted RBP19.84■□□□□ 0.77
SFXN1-208ENST00000507823 PLIN2Q99541 437 aa19.84■□□□□ 0.77
SFXN1-208ENST00000507823 TEX33O43247 280 aa19.83■□□□□ 0.77
SFXN1-208ENST00000507823 PTPN14Q15678 1187 aa19.83■□□□□ 0.77
SFXN1-208ENST00000507823 FILIP1LQ4L180 1135 aa19.83■□□□□ 0.77
SFXN1-208ENST00000507823 PPP1R13BQ96KQ4 1090 aa19.83■□□□□ 0.77
SFXN1-208ENST00000507823 KCNMB3Q9NPA1 279 aa19.83■□□□□ 0.77
SFXN1-208ENST00000507823 TMX2Q9Y320 296 aa19.83■□□□□ 0.77
SFXN1-208ENST00000507823 TCP10L2B9ZVM9 353 aa19.83■□□□□ 0.76
SFXN1-208ENST00000507823 ARHGAP6O43182 974 aa19.83■□□□□ 0.76
SFXN1-208ENST00000507823 CCP110O43303 1012 aa19.83■□□□□ 0.76
SFXN1-208ENST00000507823 STX10O60499 249 aa19.83■□□□□ 0.76
SFXN1-208ENST00000507823 KRT31Q15323 416 aa19.83■□□□□ 0.76
SFXN1-208ENST00000507823 ANO3Q9BYT9 981 aa19.83■□□□□ 0.76
SFXN1-208ENST00000507823 STIM1Q13586 685 aa19.82■□□□□ 0.76
SFXN1-208ENST00000507823 TCP11X2Q5H9J9 407 aa19.82■□□□□ 0.76
SFXN1-208ENST00000507823 CEP135Q66GS9 1140 aa19.82■□□□□ 0.76
SFXN1-208ENST00000507823 IRF2BP1Q8IU81 584 aa19.82■□□□□ 0.76
SFXN1-208ENST00000507823 NIM1KQ8IY84 436 aa19.82■□□□□ 0.76
SFXN1-208ENST00000507823 CCDC47Q96A33 483 aaKnown RBP19.82■□□□□ 0.76
SFXN1-208ENST00000507823 TTI2Q6NXR4 508 aa19.82■□□□□ 0.76
SFXN1-208ENST00000507823 FBXO11Q86XK2 927 aa19.82■□□□□ 0.76
SFXN1-208ENST00000507823 NOC3LQ8WTT2 800 aaKnown RBP19.82■□□□□ 0.76
SFXN1-208ENST00000507823 PANX2Q96RD6 677 aa19.82■□□□□ 0.76
SFXN1-208ENST00000507823 THAP9Q9H5L6 903 aa19.82■□□□□ 0.76
SFXN1-208ENST00000507823 PVALEFA0A1B0GWK0 134 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 CLRN2A0PK11 232 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 USP17L15C9J2P7 530 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 USP17L13C9JLJ4 530 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 USP17L11C9JVI0 530 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 USP17L18D6R9N7 530 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 USP17L22D6RA61 530 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 USP17L17D6RBQ6 530 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 USP17L19D6RCP7 530 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms