RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 CDK5RAP3Q96JB5 506 aa24.68■■□□□ 1.54
SPCS3-203ENST00000507678 CHP1Q99653 195 aa24.68■■□□□ 1.54
SPCS3-203ENST00000507678 OGFRQ9NZT2 677 aa24.68■■□□□ 1.54
SPCS3-203ENST00000507678 ITIH6Q6UXX5 1313 aa24.68■■□□□ 1.54
SPCS3-203ENST00000507678 USP17L10C9JJH3 530 aa24.68■■□□□ 1.54
SPCS3-203ENST00000507678 PPP1R11O60927 126 aaPredicted RBP24.68■■□□□ 1.54
SPCS3-203ENST00000507678 PPP2R3AQ06190 1150 aa24.68■■□□□ 1.54
SPCS3-203ENST00000507678 MCM6Q14566 821 aa24.68■■□□□ 1.54
SPCS3-203ENST00000507678 ZNF446Q9NWS9 450 aa24.67■■□□□ 1.54
SPCS3-203ENST00000507678 TTC26A0AVF1 554 aa24.67■■□□□ 1.54
SPCS3-203ENST00000507678 KIF5CO60282 957 aa24.67■■□□□ 1.54
SPCS3-203ENST00000507678 TADA3O75528 432 aa24.67■■□□□ 1.54
SPCS3-203ENST00000507678 ZNF543Q08ER8 600 aa24.67■■□□□ 1.54
SPCS3-203ENST00000507678 ANKRD40Q6AI12 368 aa24.67■■□□□ 1.54
SPCS3-203ENST00000507678 MB21D1Q8N884 522 aa24.67■■□□□ 1.54
SPCS3-203ENST00000507678 CCDC47Q96A33 483 aaKnown RBP24.67■■□□□ 1.54
SPCS3-203ENST00000507678 PCMTD1Q96MG8 357 aaPredicted RBP24.67■■□□□ 1.54
SPCS3-203ENST00000507678 MARCH6O60337 910 aa24.66■■□□□ 1.54
SPCS3-203ENST00000507678 NPR1P16066 1061 aa24.66■■□□□ 1.54
SPCS3-203ENST00000507678 KLK7P49862 253 aa24.66■■□□□ 1.54
SPCS3-203ENST00000507678 CLCN6P51797 869 aa24.66■■□□□ 1.54
SPCS3-203ENST00000507678 APOBEC3HQ6NTF7 200 aaKnown RBP24.66■■□□□ 1.54
SPCS3-203ENST00000507678 TTI2Q6NXR4 508 aa24.66■■□□□ 1.54
SPCS3-203ENST00000507678 NUDT12Q9BQG2 462 aa24.66■■□□□ 1.54
SPCS3-203ENST00000507678 NKRFO15226 690 aaKnown RBP eCLIP24.66■■□□□ 1.54
SPCS3-203ENST00000507678 HLA-DOAP06340 250 aa24.66■■□□□ 1.54
SPCS3-203ENST00000507678 IDEP14735 1019 aa24.66■■□□□ 1.54
SPCS3-203ENST00000507678 MAP3K9P80192 1104 aa24.66■■□□□ 1.54
SPCS3-203ENST00000507678 DUSP9Q99956 384 aaKnown RBP24.66■■□□□ 1.54
SPCS3-203ENST00000507678 MRFAP1Q9Y605 127 aa24.66■■□□□ 1.54
SPCS3-203ENST00000507678 NOVP48745 357 aa24.65■■□□□ 1.54
SPCS3-203ENST00000507678 ADAMTSL1Q8N6G6 1762 aa24.65■■□□□ 1.54
SPCS3-203ENST00000507678 TFRCP02786 760 aaKnown RBP24.65■■□□□ 1.54
SPCS3-203ENST00000507678 SMARCA1P28370 1054 aa24.65■■□□□ 1.54
SPCS3-203ENST00000507678 GRB10Q13322 594 aa24.65■■□□□ 1.54
SPCS3-203ENST00000507678 TAF3Q5VWG9 929 aa24.65■■□□□ 1.54
SPCS3-203ENST00000507678 TMC4Q7Z404 712 aa24.65■■□□□ 1.54
SPCS3-203ENST00000507678 P2RX5Q93086 422 aa24.65■■□□□ 1.54
SPCS3-203ENST00000507678 TUBGCP2Q9BSJ2 902 aa24.65■■□□□ 1.54
SPCS3-203ENST00000507678 LGALS16A8MUM7 142 aa24.64■■□□□ 1.54
SPCS3-203ENST00000507678 EDIL3O43854 480 aa24.64■■□□□ 1.54
SPCS3-203ENST00000507678 CRKP46108 304 aa24.64■■□□□ 1.54
SPCS3-203ENST00000507678 CYP26C1Q6V0L0 522 aa24.64■■□□□ 1.54
SPCS3-203ENST00000507678 TMTC1Q8IUR5 882 aa24.64■■□□□ 1.54
SPCS3-203ENST00000507678 NLGN1Q8N2Q7 840 aa24.64■■□□□ 1.54
SPCS3-203ENST00000507678 SNX29Q8TEQ0 813 aa24.64■■□□□ 1.54
SPCS3-203ENST00000507678 PUF60Q9UHX1 559 aaKnown RBP24.64■■□□□ 1.54
SPCS3-203ENST00000507678 TFR2Q9UP52 801 aa24.64■■□□□ 1.54
SPCS3-203ENST00000507678 IGKV6D-41A0A0C4DH26 115 aa24.64■■□□□ 1.53
SPCS3-203ENST00000507678 MYL1P05976 194 aa24.64■■□□□ 1.53
SPCS3-203ENST00000507678 MTIF2P46199 727 aaKnown RBP24.64■■□□□ 1.53
SPCS3-203ENST00000507678 TMEM266Q2M3C6 531 aa24.64■■□□□ 1.53
SPCS3-203ENST00000507678 SV2BQ7L1I2 683 aa24.64■■□□□ 1.53
SPCS3-203ENST00000507678 GPIHBP1Q8IV16 184 aa24.64■■□□□ 1.53
SPCS3-203ENST00000507678 CCDC51Q96ER9 411 aa24.64■■□□□ 1.53
SPCS3-203ENST00000507678 CUEDC2Q9H467 287 aa24.64■■□□□ 1.53
SPCS3-203ENST00000507678 PNMA6FA0A0J9YX94 578 aa24.63■■□□□ 1.53
SPCS3-203ENST00000507678 ESYT2A0FGR8 921 aa24.63■■□□□ 1.53
SPCS3-203ENST00000507678 SNAP25P60880 206 aa24.63■■□□□ 1.53
SPCS3-203ENST00000507678 CNOT6LQ96LI5 555 aaKnown RBP24.63■■□□□ 1.53
SPCS3-203ENST00000507678 MTMR9Q96QG7 549 aa24.63■■□□□ 1.53
SPCS3-203ENST00000507678 THAP9Q9H5L6 903 aa24.63■■□□□ 1.53
SPCS3-203ENST00000507678 MYMKA6NI61 221 aa24.63■■□□□ 1.53
SPCS3-203ENST00000507678 EFCAB8A8MWE9 144 aa24.63■■□□□ 1.53
SPCS3-203ENST00000507678 SNHG28P0DPA3 235 aa24.63■■□□□ 1.53
SPCS3-203ENST00000507678 H2AFXP16104 143 aaPredicted RBP24.63■■□□□ 1.53
SPCS3-203ENST00000507678 AMPD3Q01432 767 aa24.63■■□□□ 1.53
SPCS3-203ENST00000507678 KIF4BQ2VIQ3 1234 aa24.63■■□□□ 1.53
SPCS3-203ENST00000507678 SLC35F6Q8N357 371 aa24.63■■□□□ 1.53
SPCS3-203ENST00000507678 KIAA0895Q8NCT3 520 aa24.63■■□□□ 1.53
SPCS3-203ENST00000507678 TRIM10Q9UDY6 481 aa24.63■■□□□ 1.53
SPCS3-203ENST00000507678 LUC7L2Q9Y383 392 aaKnown RBP24.63■■□□□ 1.53
SPCS3-203ENST00000507678 EEF1GP26641 437 aaKnown RBP24.62■■□□□ 1.53
SPCS3-203ENST00000507678 ALDH1B1P30837 517 aa24.62■■□□□ 1.53
SPCS3-203ENST00000507678 C7orf25Q9BPX7 421 aa24.62■■□□□ 1.53
SPCS3-203ENST00000507678 BLOC1S4Q9NUP1 217 aa24.62■■□□□ 1.53
SPCS3-203ENST00000507678 SWAP70Q9UH65 585 aa24.62■■□□□ 1.53
SPCS3-203ENST00000507678 USP17L15C9J2P7 530 aa24.62■■□□□ 1.53
SPCS3-203ENST00000507678 USP17L13C9JLJ4 530 aa24.62■■□□□ 1.53
SPCS3-203ENST00000507678 USP17L11C9JVI0 530 aa24.62■■□□□ 1.53
SPCS3-203ENST00000507678 USP17L18D6R9N7 530 aa24.62■■□□□ 1.53
SPCS3-203ENST00000507678 USP17L22D6RA61 530 aa24.62■■□□□ 1.53
SPCS3-203ENST00000507678 USP17L17D6RBQ6 530 aa24.62■■□□□ 1.53
SPCS3-203ENST00000507678 USP17L19D6RCP7 530 aa24.62■■□□□ 1.53
SPCS3-203ENST00000507678 USP17L20D6RJB6 530 aa24.62■■□□□ 1.53
SPCS3-203ENST00000507678 APBA3O96018 575 aa24.62■■□□□ 1.53
SPCS3-203ENST00000507678 SSBP05455 408 aaKnown RBP eCLIP24.62■■□□□ 1.53
SPCS3-203ENST00000507678 TRIM21P19474 475 aaKnown RBP24.62■■□□□ 1.53
SPCS3-203ENST00000507678 USP17L24Q0WX57 530 aa24.62■■□□□ 1.53
SPCS3-203ENST00000507678 USP17L6PQ6QN14 398 aa24.62■■□□□ 1.53
SPCS3-203ENST00000507678 DHTKD1Q96HY7 919 aaPredicted RBP24.62■■□□□ 1.53
SPCS3-203ENST00000507678 PNMA5Q96PV4 448 aa24.62■■□□□ 1.53
SPCS3-203ENST00000507678 PLIN4Q96Q06 1357 aa24.62■■□□□ 1.53
SPCS3-203ENST00000507678 SEC31AO94979 1220 aaKnown RBP24.61■■□□□ 1.53
SPCS3-203ENST00000507678 CCNE1P24864 410 aa24.61■■□□□ 1.53
SPCS3-203ENST00000507678 TBC1D8BQ0IIM8 1120 aa24.61■■□□□ 1.53
SPCS3-203ENST00000507678 KCNK18Q7Z418 384 aa24.61■■□□□ 1.53
SPCS3-203ENST00000507678 LARP4BQ92615 738 aaKnown RBP24.61■■□□□ 1.53
SPCS3-203ENST00000507678 DNAJC18Q9H819 358 aa24.61■■□□□ 1.53
SPCS3-203ENST00000507678 AGPAT5Q9NUQ2 364 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms