RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 IL23AQ9NPF7 189 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 THEGQ9P2T0 379 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 MSRAQ9UJ68 235 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 FEM1BQ9UK73 627 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 BAZ2AQ9UIF9 1905 aaKnown RBP12.51□□□□□ -0.41
CPNE4-206ENST00000505957 GSG1L2A8MUP6 293 aa12.51□□□□□ -0.41
CPNE4-206ENST00000505957 PATL2C9JE40 543 aaKnown RBP12.51□□□□□ -0.41
CPNE4-206ENST00000505957 FGAP02671 866 aa12.51□□□□□ -0.41
CPNE4-206ENST00000505957 ACRP10323 421 aa12.51□□□□□ -0.41
CPNE4-206ENST00000505957 MRPS5P82675 430 aaKnown RBP12.51□□□□□ -0.41
CPNE4-206ENST00000505957 NFKBIBQ15653 356 aa12.51□□□□□ -0.41
CPNE4-206ENST00000505957 CLEC17AQ6ZS10 378 aa12.51□□□□□ -0.41
CPNE4-206ENST00000505957 STOX1Q6ZVD7 989 aa12.51□□□□□ -0.41
CPNE4-206ENST00000505957 CCDC144CPQ8IYA2 1237 aa12.51□□□□□ -0.41
CPNE4-206ENST00000505957 GMCL1P1Q8NEA9 526 aa12.51□□□□□ -0.41
CPNE4-206ENST00000505957 KIFC2Q96AC6 838 aa12.51□□□□□ -0.41
CPNE4-206ENST00000505957 ZNF287Q9HBT7 754 aa12.51□□□□□ -0.41
CPNE4-206ENST00000505957 RAVER2Q9HCJ3 691 aaKnown RBP12.51□□□□□ -0.41
CPNE4-206ENST00000505957 CLIP2Q9UDT6 1046 aa12.51□□□□□ -0.41
CPNE4-206ENST00000505957 TAF6LQ9Y6J9 622 aa12.51□□□□□ -0.41
CPNE4-206ENST00000505957 E7EWF7 191 aa12.5□□□□□ -0.41
CPNE4-206ENST00000505957 FGBP02675 491 aa12.5□□□□□ -0.41
CPNE4-206ENST00000505957 PDIA4P13667 645 aaKnown RBP12.5□□□□□ -0.41
CPNE4-206ENST00000505957 ADGRE1Q14246 886 aa12.5□□□□□ -0.41
CPNE4-206ENST00000505957 DHX32Q7L7V1 743 aaKnown RBP12.5□□□□□ -0.41
CPNE4-206ENST00000505957 FAM133AQ8N9E0 248 aa12.5□□□□□ -0.41
CPNE4-206ENST00000505957 PPM1EQ8WY54 764 aa12.5□□□□□ -0.41
CPNE4-206ENST00000505957 PPP1R12CQ9BZL4 782 aa12.5□□□□□ -0.41
CPNE4-206ENST00000505957 MTMR4Q9NYA4 1195 aa12.5□□□□□ -0.41
CPNE4-206ENST00000505957 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.5□□□□□ -0.41
CPNE4-206ENST00000505957 ASB14A6NK59 587 aa12.49□□□□□ -0.41
CPNE4-206ENST00000505957 TTLL1O95922 423 aa12.49□□□□□ -0.41
CPNE4-206ENST00000505957 CYP2C18P33260 490 aa12.49□□□□□ -0.41
CPNE4-206ENST00000505957 EXOSC10Q01780 885 aaKnown RBP12.49□□□□□ -0.41
CPNE4-206ENST00000505957 TNFAIP2Q03169 654 aa12.49□□□□□ -0.41
CPNE4-206ENST00000505957 TOB2Q14106 344 aaPredicted RBP12.49□□□□□ -0.41
CPNE4-206ENST00000505957 ZNF444Q8N0Y2 327 aaPredicted RBP12.49□□□□□ -0.41
CPNE4-206ENST00000505957 SPRYD3Q8NCJ5 442 aa12.49□□□□□ -0.41
CPNE4-206ENST00000505957 ADAMTS19Q8TE59 1207 aa12.49□□□□□ -0.41
CPNE4-206ENST00000505957 CEP95Q96GE4 821 aa12.49□□□□□ -0.41
CPNE4-206ENST00000505957 HIPK3Q9H422 1215 aa12.49□□□□□ -0.41
CPNE4-206ENST00000505957 ACAD9Q9H845 621 aa12.49□□□□□ -0.41
CPNE4-206ENST00000505957 SLC28A3Q9HAS3 691 aa12.49□□□□□ -0.41
CPNE4-206ENST00000505957 CXXC1Q9P0U4 656 aaPredicted RBP12.49□□□□□ -0.41
CPNE4-206ENST00000505957 GNEQ9Y223 722 aaKnown RBP12.49□□□□□ -0.41
CPNE4-206ENST00000505957 Q9Y3F1 56 aa12.49□□□□□ -0.41
CPNE4-206ENST00000505957 MUC3AQ02505 3323 aa12.49□□□□□ -0.41
CPNE4-206ENST00000505957 ASTN1O14525 1302 aa12.48□□□□□ -0.41
CPNE4-206ENST00000505957 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.48□□□□□ -0.41
CPNE4-206ENST00000505957 MINDY4BA8MYZ0 360 aa12.48□□□□□ -0.41
CPNE4-206ENST00000505957 ZNF213O14771 459 aa12.48□□□□□ -0.41
CPNE4-206ENST00000505957 ZEB2O60315 1214 aa12.48□□□□□ -0.41
CPNE4-206ENST00000505957 BMP3P12645 472 aa12.48□□□□□ -0.41
CPNE4-206ENST00000505957 CPA1P15085 419 aa12.48□□□□□ -0.41
CPNE4-206ENST00000505957 EVCP57679 992 aa12.48□□□□□ -0.41
CPNE4-206ENST00000505957 BEX3Q00994 111 aa12.48□□□□□ -0.41
CPNE4-206ENST00000505957 CNTN2Q02246 1040 aa12.48□□□□□ -0.41
CPNE4-206ENST00000505957 TKFCQ3LXA3 575 aa12.48□□□□□ -0.41
CPNE4-206ENST00000505957 MB21D2Q8IYB1 491 aaPredicted RBP12.48□□□□□ -0.41
CPNE4-206ENST00000505957 CHMP4CQ96CF2 233 aa12.48□□□□□ -0.41
CPNE4-206ENST00000505957 UHRF1Q96T88 793 aaPredicted RBP12.48□□□□□ -0.41
CPNE4-206ENST00000505957 MTA3Q9BTC8 594 aa12.48□□□□□ -0.41
CPNE4-206ENST00000505957 NACAP1Q9BZK3 213 aa12.48□□□□□ -0.41
CPNE4-206ENST00000505957 NKX2-4Q9H2Z4 354 aa12.48□□□□□ -0.41
CPNE4-206ENST00000505957 EPB41L4AQ9HCS5 686 aaPredicted RBP12.48□□□□□ -0.41
CPNE4-206ENST00000505957 PLIN4Q96Q06 1357 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 NCOR1O75376 2440 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 PLA2G6O60733 806 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 IGFBP4P22692 258 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 NT5C2P49902 561 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 STAT2P52630 851 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 ITGA7Q13683 1181 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 FSCN1Q16658 493 aaKnown RBP12.47□□□□□ -0.41
CPNE4-206ENST00000505957 SLFN13Q68D06 897 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 IQSEC1Q6DN90 963 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 CXCL17Q6UXB2 119 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 NOL8Q76FK4 1167 aaKnown RBP12.47□□□□□ -0.41
CPNE4-206ENST00000505957 TLK2Q86UE8 772 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 FAM160B2Q86V87 743 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 RPUSD2Q8IZ73 545 aaKnown RBP12.47□□□□□ -0.41
CPNE4-206ENST00000505957 IFNL3Q8IZI9 196 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 STK11IPQ8N1F8 1099 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 NEDD1Q8NHV4 660 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 CHURC1Q8WUH1 139 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 NOC4LQ9BVI4 516 aaKnown RBP12.47□□□□□ -0.41
CPNE4-206ENST00000505957 AP5M1Q9H0R1 490 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 TSPYL2Q9H2G4 693 aaPredicted RBP12.47□□□□□ -0.41
CPNE4-206ENST00000505957 A1CFQ9NQ94 594 aaKnown RBP12.47□□□□□ -0.41
CPNE4-206ENST00000505957 TPCN1Q9ULQ1 816 aa12.47□□□□□ -0.41
CPNE4-206ENST00000505957 YBX2Q9Y2T7 364 aaKnown RBP12.47□□□□□ -0.41
CPNE4-206ENST00000505957 ZNF536O15090 1300 aa12.46□□□□□ -0.41
CPNE4-206ENST00000505957 GRIN2DO15399 1336 aa12.46□□□□□ -0.41
CPNE4-206ENST00000505957 UMODL1Q5DID0 1318 aa12.46□□□□□ -0.41
CPNE4-206ENST00000505957 SOWAHBA6NEL2 793 aa12.46□□□□□ -0.41
CPNE4-206ENST00000505957 TMEM232C9JQI7 657 aa12.46□□□□□ -0.41
CPNE4-206ENST00000505957 PCP11498 1178 aaKnown RBP12.46□□□□□ -0.41
CPNE4-206ENST00000505957 PTMSP20962 102 aa12.46□□□□□ -0.41
CPNE4-206ENST00000505957 CCDC85BQ15834 202 aaPredicted RBP12.46□□□□□ -0.41
CPNE4-206ENST00000505957 ME3Q16798 604 aa12.46□□□□□ -0.41
CPNE4-206ENST00000505957 PPP4R3BQ5MIZ7 849 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms