RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 SOX9P48436 509 aa5.42□□□□□ -1.54
RFC1-208ENST00000504849 KLF10Q13118 480 aa5.42□□□□□ -1.54
RFC1-208ENST00000504849 DDX10Q13206 875 aaKnown RBP5.42□□□□□ -1.54
RFC1-208ENST00000504849 ARSHQ5FYA8 562 aa5.42□□□□□ -1.54
RFC1-208ENST00000504849 CEP128Q6ZU80 1094 aa5.42□□□□□ -1.54
RFC1-208ENST00000504849 ANKS3Q6ZW76 656 aa5.42□□□□□ -1.54
RFC1-208ENST00000504849 SH3RF3Q8TEJ3 882 aaPredicted RBP5.42□□□□□ -1.54
RFC1-208ENST00000504849 FNIP1Q8TF40 1166 aa5.42□□□□□ -1.54
RFC1-208ENST00000504849 TMEM87BQ96K49 555 aa5.42□□□□□ -1.54
RFC1-208ENST00000504849 PSMD1Q99460 953 aa5.42□□□□□ -1.54
RFC1-208ENST00000504849 ZNF747Q9BV97 191 aa5.42□□□□□ -1.54
RFC1-208ENST00000504849 TYW1Q9NV66 732 aaKnown RBP5.42□□□□□ -1.54
RFC1-208ENST00000504849 KBTBD4Q9NVX7 518 aa5.42□□□□□ -1.54
RFC1-208ENST00000504849 TONSLQ96HA7 1378 aa5.42□□□□□ -1.54
RFC1-208ENST00000504849 LRRC9Q6ZRR7 1453 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 LOC102724159A0A0B4J2E5 919 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 SH3D21A4FU49 640 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 GFRA2O00451 464 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 RLBP1P12271 317 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 GSTT1P30711 240 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 NASPP49321 788 aaPredicted RBP5.41□□□□□ -1.54
RFC1-208ENST00000504849 HTRA3P83110 453 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 RASA3Q14644 834 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 PWP2Q15269 919 aaKnown RBP5.41□□□□□ -1.54
RFC1-208ENST00000504849 PLEKHG6Q3KR16 790 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 PCNX4Q63HM2 1172 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 SAPCD2Q86UD0 394 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 ANKRD24Q8TF21 1146 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 ZNF526Q8TF50 670 aaPredicted RBP5.41□□□□□ -1.54
RFC1-208ENST00000504849 LOXL4Q96JB6 756 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 DEPDC7Q96QD5 511 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 COPRSQ9NQ92 184 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 SNTG2Q9NY99 539 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 SUSD2Q9UGT4 822 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 ING1Q9UK53 422 aaPredicted RBP5.41□□□□□ -1.54
RFC1-208ENST00000504849 KCNH3Q9ULD8 1083 aa5.41□□□□□ -1.54
RFC1-208ENST00000504849 HMGXB3Q12766 1538 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 TMEM82A0PJX8 343 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 CDC45O75419 566 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 MPOP05164 745 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 CELA3AP09093 270 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 MSL3P1P0C860 447 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 GORABQ5T7V8 394 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 SLC6A19Q695T7 634 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 ZNF575Q86XF7 245 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 RELL1Q8IUW5 271 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 RPUSD2Q8IZ73 545 aaKnown RBP5.4□□□□□ -1.54
RFC1-208ENST00000504849 DVL3Q92997 716 aaPredicted RBP5.4□□□□□ -1.54
RFC1-208ENST00000504849 SSBP3Q9BWW4 388 aaPredicted RBP5.4□□□□□ -1.54
RFC1-208ENST00000504849 NT5C1AQ9BXI3 368 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 CEP44Q9C0F1 390 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 DDX56Q9NY93 547 aaKnown RBP5.4□□□□□ -1.54
RFC1-208ENST00000504849 CHPF2Q9P2E5 772 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 PRKAG3Q9UGI9 489 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 ADAMTS1Q9UHI8 967 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 EFR3BQ9Y2G0 817 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 FAN1Q9Y2M0 1017 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 R3HCC1Q9Y3T6 440 aaKnown RBP5.4□□□□□ -1.54
RFC1-208ENST00000504849 TNFRSF18Q9Y5U5 241 aa5.4□□□□□ -1.54
RFC1-208ENST00000504849 SPATA31D1Q6ZQQ2 1576 aa5.39□□□□□ -1.55
RFC1-208ENST00000504849 WDR97A6NE52 1622 aa5.39□□□□□ -1.55
RFC1-208ENST00000504849 TPD52L2O43399 206 aaKnown RBP5.39□□□□□ -1.55
RFC1-208ENST00000504849 S100BP04271 92 aaPredicted RBP5.39□□□□□ -1.55
RFC1-208ENST00000504849 ETFBP38117 255 aa5.39□□□□□ -1.55
RFC1-208ENST00000504849 EIF4A3P38919 411 aaKnown RBP5.39□□□□□ -1.55
RFC1-208ENST00000504849 CHMP4BP1P59074 171 aa5.39□□□□□ -1.55
RFC1-208ENST00000504849 CBX2Q14781 532 aaPredicted RBP5.39□□□□□ -1.55
RFC1-208ENST00000504849 SLC14A2Q15849 920 aa5.39□□□□□ -1.55
RFC1-208ENST00000504849 TNNI3KQ59H18 835 aa5.39□□□□□ -1.55
RFC1-208ENST00000504849 APPBP2Q92624 585 aa5.39□□□□□ -1.55
RFC1-208ENST00000504849 CCDC113Q9H0I3 377 aa5.39□□□□□ -1.55
RFC1-208ENST00000504849 KCNQ5Q9NR82 932 aa5.39□□□□□ -1.55
RFC1-208ENST00000504849 SLC52A1Q9NWF4 448 aa5.39□□□□□ -1.55
RFC1-208ENST00000504849 CUX1P39880 1505 aa5.38□□□□□ -1.55
RFC1-208ENST00000504849 CFAP43Q8NDM7 1665 aa5.38□□□□□ -1.55
RFC1-208ENST00000504849 RPL10P27635 214 aaKnown RBP5.38□□□□□ -1.55
RFC1-208ENST00000504849 FAM50AQ14320 339 aaKnown RBP5.38□□□□□ -1.55
RFC1-208ENST00000504849 RAB3GAP1Q15042 981 aa5.38□□□□□ -1.55
RFC1-208ENST00000504849 KIAA0907Q7Z7F0 614 aaPredicted RBP5.38□□□□□ -1.55
RFC1-208ENST00000504849 HOMER1Q86YM7 354 aa5.38□□□□□ -1.55
RFC1-208ENST00000504849 SH3TC2Q8TF17 1288 aa5.38□□□□□ -1.55
RFC1-208ENST00000504849 TMEM74Q96NL1 305 aa5.38□□□□□ -1.55
RFC1-208ENST00000504849 GINM1Q9NU53 330 aa5.38□□□□□ -1.55
RFC1-208ENST00000504849 PPM1HQ9ULR3 514 aa5.38□□□□□ -1.55
RFC1-208ENST00000504849 TTF2Q9UNY4 1162 aaKnown RBP5.38□□□□□ -1.55
RFC1-208ENST00000504849 MSRB2Q9Y3D2 182 aa5.38□□□□□ -1.55
RFC1-208ENST00000504849 PCSK5Q92824 1860 aa5.38□□□□□ -1.55
RFC1-208ENST00000504849 FYCO1Q9BQS8 1478 aa5.38□□□□□ -1.55
RFC1-208ENST00000504849 EFCAB5A4FU69 1503 aa5.38□□□□□ -1.55
RFC1-208ENST00000504849 CCDC194A0A1B0GVG4 234 aa5.37□□□□□ -1.55
RFC1-208ENST00000504849 NUDT19A8MXV4 375 aa5.37□□□□□ -1.55
RFC1-208ENST00000504849 TBC1D10BQ4KMP7 808 aaPredicted RBP5.37□□□□□ -1.55
RFC1-208ENST00000504849 RPTNQ6XPR3 784 aa5.37□□□□□ -1.55
RFC1-208ENST00000504849 WAPLQ7Z5K2 1190 aa5.37□□□□□ -1.55
RFC1-208ENST00000504849 MCATQ8IVS2 390 aaKnown RBP5.37□□□□□ -1.55
RFC1-208ENST00000504849 USHBP1Q8N6Y0 703 aa5.37□□□□□ -1.55
RFC1-208ENST00000504849 RNF141Q8WVD5 230 aa5.37□□□□□ -1.55
RFC1-208ENST00000504849 CPLX3Q8WVH0 158 aa5.37□□□□□ -1.55
RFC1-208ENST00000504849 ACSF2Q96CM8 615 aaPredicted RBP5.37□□□□□ -1.55
RFC1-208ENST00000504849 EAF1Q96JC9 268 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms