RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 MBD4O95243 580 aa9.52□□□□□ -0.89
CCDC149-204ENST00000504487 FAM107AO95990 144 aa9.52□□□□□ -0.89
CCDC149-204ENST00000504487 HSPA1LP34931 641 aa9.52□□□□□ -0.89
CCDC149-204ENST00000504487 CARSP49589 748 aaKnown RBP9.52□□□□□ -0.89
CCDC149-204ENST00000504487 EHHADHQ08426 723 aa9.52□□□□□ -0.89
CCDC149-204ENST00000504487 PDE4DQ08499 809 aa9.52□□□□□ -0.89
CCDC149-204ENST00000504487 PREPLQ4J6C6 727 aaPredicted RBP9.52□□□□□ -0.89
CCDC149-204ENST00000504487 FAM133BQ5BKY9 247 aaKnown RBP9.52□□□□□ -0.89
CCDC149-204ENST00000504487 TRIM68Q6AZZ1 485 aa9.52□□□□□ -0.89
CCDC149-204ENST00000504487 TBC1D10CQ8IV04 446 aa9.52□□□□□ -0.89
CCDC149-204ENST00000504487 CCDC197Q8NCU1 140 aa9.52□□□□□ -0.89
CCDC149-204ENST00000504487 CYFIP2Q96F07 1278 aa9.52□□□□□ -0.89
CCDC149-204ENST00000504487 YIPF3Q9GZM5 350 aa9.52□□□□□ -0.89
CCDC149-204ENST00000504487 ARMT1Q9H993 441 aa9.52□□□□□ -0.89
CCDC149-204ENST00000504487 NLRC4Q9NPP4 1024 aa9.52□□□□□ -0.89
CCDC149-204ENST00000504487 TCP11L1Q9NUJ3 509 aa9.52□□□□□ -0.89
CCDC149-204ENST00000504487 AGPAT5Q9NUQ2 364 aa9.52□□□□□ -0.89
CCDC149-204ENST00000504487 AATFQ9NY61 560 aaKnown RBP eCLIP9.52□□□□□ -0.89
CCDC149-204ENST00000504487 LIMA1Q9UHB6 759 aaKnown RBP9.52□□□□□ -0.89
CCDC149-204ENST00000504487 TECPR2O15040 1411 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 ZNF532Q9HCE3 1301 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 AGPSO00116 658 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 PDE2AO00408 941 aaPredicted RBP9.51□□□□□ -0.89
CCDC149-204ENST00000504487 SHOX2O60902 331 aaPredicted RBP9.51□□□□□ -0.89
CCDC149-204ENST00000504487 ZNF658Q5TYW1 1059 aaPredicted RBP9.51□□□□□ -0.89
CCDC149-204ENST00000504487 TSEN2Q8NCE0 465 aaKnown RBP9.51□□□□□ -0.89
CCDC149-204ENST00000504487 GPR101Q96P66 508 aaPredicted RBP9.51□□□□□ -0.89
CCDC149-204ENST00000504487 CDCA7Q9BWT1 371 aaPredicted RBP9.51□□□□□ -0.89
CCDC149-204ENST00000504487 ZSWIM5Q9P217 1185 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 PCDHA13Q9Y5I0 950 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 MAP3K15Q6ZN16 1313 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 LGALS16A8MUM7 142 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 CTNND1O60716 968 aaKnown RBP9.51□□□□□ -0.89
CCDC149-204ENST00000504487 FGFR1OPO95684 399 aaKnown RBP9.51□□□□□ -0.89
CCDC149-204ENST00000504487 EEF1GP26641 437 aaKnown RBP9.51□□□□□ -0.89
CCDC149-204ENST00000504487 PCK1P35558 622 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 EIF4A3P38919 411 aaKnown RBP9.51□□□□□ -0.89
CCDC149-204ENST00000504487 PRCPP42785 496 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 PHKA1P46020 1223 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 CTSWP56202 376 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 LACTBP83111 547 aaPredicted RBP9.51□□□□□ -0.89
CCDC149-204ENST00000504487 FANCBQ8NB91 859 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 FTCDO95954 541 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 TMOD1P28289 359 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 NBPF9Q3BBW0 867 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 IFIT1BQ5T764 474 aaKnown RBP9.51□□□□□ -0.89
CCDC149-204ENST00000504487 DTHD1Q6ZMT9 781 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 ZNF654Q8IZM8 581 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 ZHX3Q9H4I2 956 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 TSKSQ9UJT2 592 aa9.51□□□□□ -0.89
CCDC149-204ENST00000504487 DLC1Q96QB1 1528 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 PPP1R3GB7ZBB8 358 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 SARSP49591 514 aaKnown RBP9.5□□□□□ -0.89
CCDC149-204ENST00000504487 KIF11P52732 1056 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 MDM2Q00987 491 aaPredicted RBP9.5□□□□□ -0.89
CCDC149-204ENST00000504487 DRP2Q13474 957 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 TTMPQ5BVD1 217 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 CDKAL1Q5VV42 579 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 TRMT1LQ7Z2T5 733 aaKnown RBP9.5□□□□□ -0.89
CCDC149-204ENST00000504487 ZBTB38Q8NAP3 1195 aaPredicted RBP9.5□□□□□ -0.89
CCDC149-204ENST00000504487 AENQ8WTP8 325 aaKnown RBP9.5□□□□□ -0.89
CCDC149-204ENST00000504487 MS4A14Q96JA4 679 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 AFF2P51816 1311 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 ANKRD26Q9UPS8 1709 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 KCNK3O14649 394 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 HERVK_113P62684 666 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 DDR1Q08345 913 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 CAPRIN2Q6IMN6 1127 aaKnown RBP9.5□□□□□ -0.89
CCDC149-204ENST00000504487 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.5□□□□□ -0.89
CCDC149-204ENST00000504487 NLRP10Q86W26 655 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 MMGT1Q8N4V1 131 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 WHAMMQ8TF30 809 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 ESR2Q92731 530 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 CNOT6LQ96LI5 555 aaKnown RBP9.5□□□□□ -0.89
CCDC149-204ENST00000504487 SPAG5Q96R06 1193 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 RBM12Q9NTZ6 932 aaKnown RBP9.5□□□□□ -0.89
CCDC149-204ENST00000504487 CAPN11Q9UMQ6 739 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 FER1L4A9Z1Z3 1794 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 NEDD4P46934 1319 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.5□□□□□ -0.89
CCDC149-204ENST00000504487 FAM205CA6NFA0 338 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 TSPY2A6NKD2 308 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 RNF225M0QZC1 329 aaPredicted RBP9.5□□□□□ -0.89
CCDC149-204ENST00000504487 IFNAR2P48551 515 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 ATP11AP98196 1134 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 AKNAD1Q5T1N1 836 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 RBM26Q5T8P6 1007 aaKnown RBP9.5□□□□□ -0.89
CCDC149-204ENST00000504487 SUSD4Q5VX71 490 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 KDM7AQ6ZMT4 941 aa9.5□□□□□ -0.89
CCDC149-204ENST00000504487 PALLDQ8WX93 1383 aa9.49□□□□□ -0.89
CCDC149-204ENST00000504487 IFT172Q9UG01 1749 aa9.49□□□□□ -0.89
CCDC149-204ENST00000504487 UFL1O94874 794 aa9.49□□□□□ -0.89
CCDC149-204ENST00000504487 TOB1P50616 345 aaPredicted RBP9.49□□□□□ -0.89
CCDC149-204ENST00000504487 MARCH10Q8NA82 808 aaPredicted RBP9.49□□□□□ -0.89
CCDC149-204ENST00000504487 OR2W6PQ8NHA6 318 aa9.49□□□□□ -0.89
CCDC149-204ENST00000504487 NSMCE1Q8WV22 266 aa9.49□□□□□ -0.89
CCDC149-204ENST00000504487 TSG101Q99816 390 aa9.49□□□□□ -0.89
CCDC149-204ENST00000504487 KIF9Q9HAQ2 790 aa9.49□□□□□ -0.89
CCDC149-204ENST00000504487 MCM8Q9UJA3 840 aa9.49□□□□□ -0.89
CCDC149-204ENST00000504487 TPX2Q9ULW0 747 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms