RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 TRAV20A0A0B4J274 112 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 C9IYK1 514 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 CRTAMO95727 393 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 DCAF15Q66K64 600 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 CARNMT1Q8N4J0 409 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 ACRBPQ8NEB7 543 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 TAF4BQ92750 862 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 PGAP2Q9UHJ9 254 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 ANKRD6Q9Y2G4 727 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 A0A1B0GVC2 190 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 H0Y3Z8 333 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 CTNND1O60716 968 aaKnown RBP6.1□□□□□ -1.43
NIPBL-204ENST00000504430 ADH1CP00326 375 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 IREB2P48200 963 aaKnown RBP6.1□□□□□ -1.43
NIPBL-204ENST00000504430 CTCFP49711 727 aaPredicted RBP6.1□□□□□ -1.43
NIPBL-204ENST00000504430 CCDC149Q6ZUS6 474 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 HFE2Q6ZVN8 426 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 TEX11Q8IYF3 940 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 CLRN3Q8NCR9 226 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 WNK4Q96J92 1243 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 PPM1MQ96MI6 270 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 IPO9Q96P70 1041 aaKnown RBP6.1□□□□□ -1.43
NIPBL-204ENST00000504430 TM9SF2Q99805 663 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 AARSD1Q9BTE6 412 aaKnown RBP6.1□□□□□ -1.43
NIPBL-204ENST00000504430 GPAMQ9HCL2 828 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 TMEM39AQ9NV64 488 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 RTEL1Q9NZ71 1219 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 ROBO2Q9HCK4 1378 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 TRIM75PA6NK02 468 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 FKBP9O95302 570 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 PSAPP07602 524 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 IMPDH2P12268 514 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 ATP11AP98196 1134 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 MLLT1Q03111 559 aaPredicted RBP6.1□□□□□ -1.43
NIPBL-204ENST00000504430 LONRF2Q1L5Z9 754 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 INAVAQ3KP66 663 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 RETSATQ6NUM9 610 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 ADGRD1Q6QNK2 874 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 FKBP9P1Q75LS8 142 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 LCA5Q86VQ0 697 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 C19orf47Q8N9M1 422 aaKnown RBP6.1□□□□□ -1.43
NIPBL-204ENST00000504430 SLC35G2Q8TBE7 412 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 UBXN10Q96LJ8 280 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 CCDC138Q96M89 665 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 WDR12Q9GZL7 423 aaKnown RBP6.1□□□□□ -1.43
NIPBL-204ENST00000504430 MYLK2Q9H1R3 596 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 EMC7Q9NPA0 242 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 BRD7Q9NPI1 651 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 ATP8A2Q9NTI2 1148 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 THG1LQ9NWX6 298 aaKnown RBP6.1□□□□□ -1.43
NIPBL-204ENST00000504430 COQ6Q9Y2Z9 468 aa6.1□□□□□ -1.43
NIPBL-204ENST00000504430 GOLGA6L6A8MZA4 724 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 J3QW42 95 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 PLOD3O60568 738 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 DNTTP04053 509 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 POLBP06746 335 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 XPAP23025 273 aaPredicted RBP6.09□□□□□ -1.43
NIPBL-204ENST00000504430 HPDP32754 393 aaPredicted RBP6.09□□□□□ -1.43
NIPBL-204ENST00000504430 DDIT3P35638 169 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 SEPHS1P49903 392 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 PSMC1P62191 440 aaKnown RBP6.09□□□□□ -1.43
NIPBL-204ENST00000504430 AP3B2Q13367 1082 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 DNAJB7Q7Z6W7 309 aaPredicted RBP6.09□□□□□ -1.43
NIPBL-204ENST00000504430 ZBTB10Q96DT7 871 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 AHCYL2Q96HN2 611 aaKnown RBP6.09□□□□□ -1.43
NIPBL-204ENST00000504430 CDK15Q96Q40 435 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 SPAG5Q96R06 1193 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 INSM2Q96T92 566 aaPredicted RBP6.09□□□□□ -1.43
NIPBL-204ENST00000504430 GTPBP4Q9BZE4 634 aaKnown RBP6.09□□□□□ -1.43
NIPBL-204ENST00000504430 GPRC5BQ9NZH0 403 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 RABL2AQ9UBK7 228 aaPredicted RBP6.09□□□□□ -1.43
NIPBL-204ENST00000504430 EIF2B4Q9UI10 523 aaKnown RBP6.09□□□□□ -1.43
NIPBL-204ENST00000504430 FIGNL2A6NMB9 653 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 BOLA2-SMG1P6H3BVE0 249 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 PES1O00541 588 aaKnown RBP6.09□□□□□ -1.43
NIPBL-204ENST00000504430 VAMP4O75379 141 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 EOMESO95936 686 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 FOSL1P15407 271 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 RXRBP28702 533 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 PTPN14Q15678 1187 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 PRICKLE2Q7Z3G6 844 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 ZNF227Q86WZ6 799 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 CEP120Q8N960 986 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 C1orf162Q8NEQ5 155 aaPredicted RBP6.09□□□□□ -1.43
NIPBL-204ENST00000504430 BORCS6Q96GS4 357 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 FAXDC2Q96IV6 333 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 TRMT13Q9NUP7 481 aaKnown RBP6.09□□□□□ -1.43
NIPBL-204ENST00000504430 MKS1Q9NXB0 559 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 SUSD2Q9UGT4 822 aa6.09□□□□□ -1.43
NIPBL-204ENST00000504430 KPNA5O15131 536 aa6.09□□□□□ -1.44
NIPBL-204ENST00000504430 GLRX3O76003 335 aaKnown RBP6.09□□□□□ -1.44
NIPBL-204ENST00000504430 TBX18O95935 607 aa6.09□□□□□ -1.44
NIPBL-204ENST00000504430 BPIP17213 487 aa6.09□□□□□ -1.44
NIPBL-204ENST00000504430 ITPKAP23677 461 aa6.09□□□□□ -1.44
NIPBL-204ENST00000504430 TM4SF4P48230 202 aa6.09□□□□□ -1.44
NIPBL-204ENST00000504430 SCNN1BP51168 640 aa6.09□□□□□ -1.44
NIPBL-204ENST00000504430 RCAN1P53805 252 aa6.09□□□□□ -1.44
NIPBL-204ENST00000504430 RPS26P62854 115 aaKnown RBP6.09□□□□□ -1.44
NIPBL-204ENST00000504430 SLC7A5Q01650 507 aa6.09□□□□□ -1.44
NIPBL-204ENST00000504430 TBX2Q13207 712 aaPredicted RBP6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms