RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 XPOTO43592 962 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 SCRN1Q12765 414 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 PPP2R5AQ15172 486 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 KRT71Q3SY84 523 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 SH2D4BQ5SQS7 431 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 RAB3IPQ96QF0 476 aaPredicted RBP7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 MAGEF1Q9HAY2 307 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 ASAP1Q9ULH1 1129 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 CLASP1Q7Z460 1538 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 LAD1O00515 517 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 PTPREP23469 700 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 INPP5BP32019 993 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 BFSP1Q12934 665 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 FAM196AQ6ZSG2 479 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 CAPN12Q6ZSI9 719 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 TMC4Q7Z404 712 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 TAB3Q8N5C8 712 aaPredicted RBP7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 TRIML1Q8N9V2 468 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 OR8K1Q8NGG5 319 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 USP28Q96RU2 1077 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 PDE8BO95263 885 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 CMA1P23946 247 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 OAS2P29728 719 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 PDIA3P30101 505 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 POLR2BP30876 1174 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 TTBK2Q6IQ55 1244 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 ACCSQ96QU6 501 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 SNX25Q9H3E2 840 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 TMEM94Q12767 1356 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 BRD1O95696 1058 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 SAT1P21673 171 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 NSFP46459 744 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 PTGDRQ13258 359 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 NOP9Q86U38 636 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 KMT5AQ9NQR1 393 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 TYW1Q9NV66 732 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 RGS12O14924 1447 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 KRT3P12035 628 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 GAP43P17677 238 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 PPFIA1Q13136 1202 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 ZNF827Q17R98 1081 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 TSNAXIP1Q2TAA8 658 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 FAM26FQ5R3K3 315 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 ODR4Q5SWX8 454 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 SYDE2Q5VT97 1194 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 SKA2Q8WVK7 121 aaPredicted RBP7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 NLRP7Q8WX94 980 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 ATP6V0A1Q93050 837 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 PGBD1Q96JS3 809 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 CNOT6LQ96LI5 555 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 CCDC17Q96LX7 622 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 DPH5Q9H2P9 285 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 DDX41Q9UJV9 622 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 TYW5A2RUC4 315 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 H7C0C1 242 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 COBLO75128 1261 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 IL6STP40189 918 aaPredicted RBP7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 ATP5OP48047 213 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 NDUFA8P51970 172 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 AOC3Q16853 763 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 ADAT2Q7Z6V5 191 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 ATP7BP35670 1465 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 GOLGA8KD6RF30 607 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 DIXDC1Q155Q3 683 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 Q3C1V9 767 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 SUPT20HL1Q3ZLR7 823 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 RPGRIP1Q96KN7 1286 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 DESI2Q9BSY9 194 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 CCDC68Q9H2F9 335 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 TLR7Q9NYK1 1049 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 ANAPC5Q9UJX4 755 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 PCDHA7Q9UN72 937 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 ATP8B3O60423 1300 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 TXNDC9O14530 226 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 SLC16A2P36021 539 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 EXOC3L4Q17RC7 722 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 GPATCH4Q5T3I0 446 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 ANKRD20A3Q5VUR7 823 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 CCDC170Q8IYT3 715 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 LARSQ9P2J5 1176 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 PRKAG2Q9UGJ0 569 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 PPP2R2CQ9Y2T4 447 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 BTBD18B2RXH4 712 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 HNRNPDLO14979 420 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 GSTA1P08263 222 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 GSTA2P09210 222 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 SRGAP2BP0DMP2 458 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 PSMC2P35998 433 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 ECE1P42892 770 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 PROSER3Q2NL68 480 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 ZMYM1Q5SVZ6 1142 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 EXOC8Q8IYI6 725 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 SEC31BQ9NQW1 1179 aa7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 ADD3Q9UEY8 706 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-205ENST00000504178 IGSF3O75054 1194 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 RNF40O75150 1001 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 ZSCAN20P17040 1043 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 VPS41P49754 854 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms