RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 FILIP1LQ4L180 1135 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 TSHZ3Q63HK5 1081 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 WWC2Q6AWC2 1192 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 KRBA2Q6ZNG9 492 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 ZNF526Q8TF50 670 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-204ENST00000503468 TADA1Q96BN2 335 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 CRACR2AQ9BSW2 395 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 TNMDQ9H2S6 317 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 MYO1AQ9UBC5 1043 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 BCLAF3A2AJT9 711 aaKnown RBP3.14□□□□□ -1.91
NEDD4-204ENST00000503468 SOX12O15370 315 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 PRPF3O43395 683 aaKnown RBP3.14□□□□□ -1.91
NEDD4-204ENST00000503468 ZSCAN22P10073 491 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-204ENST00000503468 TNFRSF8P28908 595 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 INPP5BP32019 993 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 GBP2P32456 591 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-204ENST00000503468 ELF1P32519 619 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 FAM187BQ17R55 369 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 ZSCAN25Q6NSZ9 544 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 RUFY3Q7L099 469 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 CERS5Q8N5B7 392 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 GBP7Q8N8V2 638 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-204ENST00000503468 NFATC2IPQ8NCF5 419 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 ETNPPLQ8TBG4 499 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 RSRC1Q96IZ7 334 aaKnown RBP3.14□□□□□ -1.91
NEDD4-204ENST00000503468 ACTR5Q9H9F9 607 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-204ENST00000503468 LIMCH1Q9UPQ0 1083 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 HELZP42694 1942 aaKnown RBP3.14□□□□□ -1.91
NEDD4-204ENST00000503468 A0A1W2PQC6 194 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 EIF3CLB5ME19 914 aaKnown RBP3.14□□□□□ -1.91
NEDD4-204ENST00000503468 NFKBIEO00221 500 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 RGS20O76081 388 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 PIP4K2AP48426 406 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-204ENST00000503468 PIP4K2BP78356 416 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 YTHDF3Q7Z739 585 aaKnown RBP3.14□□□□□ -1.91
NEDD4-204ENST00000503468 C3orf20Q8ND61 904 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 MAGEC3Q8TD91 643 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 TMX3Q96JJ7 454 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 EIF3CQ99613 913 aaKnown RBP3.14□□□□□ -1.91
NEDD4-204ENST00000503468 ZSCAN16Q9H4T2 348 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-204ENST00000503468 STRN4Q9NRL3 753 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 RYDENQ9NUL5 291 aaKnown RBP3.14□□□□□ -1.91
NEDD4-204ENST00000503468 RAB21Q9UL25 225 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 CTSWP56202 376 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 CTDSPL2Q05D32 466 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 TYRO3Q06418 890 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 STX1AQ16623 288 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 LRRC55Q6ZSA7 311 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 SH3BP5LQ7L8J4 393 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 NME8Q8N427 588 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 DACH2Q96NX9 599 aa3.14□□□□□ -1.91
NEDD4-204ENST00000503468 POLR3CQ9BUI4 534 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-204ENST00000503468 SPDYE2BA6NHP3 402 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 STX6O43752 255 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 TADA3O75528 432 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 SPDYE6P0CI01 402 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 FOSL2P15408 326 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 MCAMP43121 646 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 USP5P45974 858 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 PSMC1P62191 440 aaKnown RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 AKAP17AQ02040 695 aaKnown RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 SLC39A14Q15043 492 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 KRT24Q2M2I5 525 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 SPDYE2Q495Y8 402 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 ZNF772Q68DY9 489 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 NLGN1Q8N2Q7 840 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 LZICQ8WZA0 190 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 ISL2Q96A47 359 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 CENPTQ96BT3 561 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 CLMNQ96JQ2 1002 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 SNX14Q9Y5W7 946 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 A6NJR5 290 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 CD9P21926 228 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 CLCN2P51788 898 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 MRPL12P52815 198 aaKnown RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 APOBRQ0VD83 1088 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 PPP2R5AQ15172 486 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 CYP26C1Q6V0L0 522 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 PPP1R42Q7Z4L9 355 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 EHBP1Q8NDI1 1231 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 GPT2Q8TD30 523 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 ZNF592Q92610 1267 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 PHAXQ9H814 394 aaKnown RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 NFKBIL1Q9UBC1 381 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 MINPP1Q9UNW1 487 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 PI4KAP2A4QPH2 592 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 CYTH3O43739 400 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 OPA1O60313 960 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 CSDE1O75534 798 aaKnown RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 POTEJP0CG39 1038 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 CLCN6P51797 869 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 MCM6Q14566 821 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 ELF2Q15723 593 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 CCDC57Q2TAC2 916 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 PI4KAP1Q8N8J0 262 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 ERGIC2Q96RQ1 377 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 HERC5Q9UII4 1024 aaKnown RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 HOOK1Q9UJC3 728 aaKnown RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 DDAH1O94760 285 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 LUC7L3O95232 432 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms