RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 CSADQ9Y600 493 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 A0A087X0B3 334 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 A0A0G2JLL6 359 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 A0A1B0GVL5 298 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 SPDYE16A6NNV3 312 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 PIK3CDO00329 1044 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 VWA5AO00534 786 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 SLC37A4O43826 429 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 CUTAO60888 179 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 TDP2O95551 362 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 ITGBL1O95965 494 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 ICAM1P05362 532 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 PFKFB1P16118 471 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 CMA1P23946 247 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 HOXA13P31271 388 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 MCM7P33993 719 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 ZNF445P59923 1031 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 GHRHRQ02643 423 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 PTGDRQ13258 359 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 PPIL2Q13356 520 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 SPECC1Q5M775 1068 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 CCDC183Q5T5S1 534 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 RESP18Q5W5W9 173 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 CATSPERGQ6ZRH7 1159 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 PRRT2Q7Z6L0 340 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 NEK8Q86SG6 692 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 ERO1BQ86YB8 467 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 KRI1Q8N9T8 703 aaKnown RBP7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 PRPF38AQ8NAV1 312 aaKnown RBP7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 ZNF526Q8TF50 670 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 OPTNQ96CV9 577 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 FUCA2Q9BTY2 467 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 ANO3Q9BYT9 981 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 CSRNP2Q9H175 543 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 CLSTN2Q9H4D0 955 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 RAVER2Q9HCJ3 691 aaKnown RBP7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 COL20A1Q9P218 1284 aa7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 SRPRBQ9Y5M8 271 aaKnown RBP7.87□□□□□ -1.15
TOPBP1-203ENST00000503464 ABCB11O95342 1321 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 SYCE3A1L190 88 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 FSD2A1L4K1 749 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 NFIBO00712 420 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 PEX10O60683 326 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 NF2P35240 595 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 HSD17B4P51659 736 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 MRPL12P52815 198 aaKnown RBP7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 FAM160A1Q05DH4 1040 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 TTLL12Q14166 644 aaPredicted RBP7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 GSE1Q14687 1217 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 TMEM132BQ14DG7 1078 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 LETM2Q2VYF4 491 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 MUM1L1Q5H9M0 696 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 CST9Q5W186 159 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 GPAT2Q6NUI2 795 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 RBM43Q6ZSC3 357 aaKnown RBP7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 JMYQ8N9B5 988 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 RBM46Q8TBY0 533 aaKnown RBP7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 LENG9Q96B70 501 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 MBOAT7Q96N66 472 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 ZNF408Q9H9D4 720 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 ZNF214Q9UL59 606 aaPredicted RBP7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 CCPG1Q9ULG6 757 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 RIPK3Q9Y572 518 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 KIAA1217Q5T5P2 1943 aa7.86□□□□□ -1.15
TOPBP1-203ENST00000503464 MYPNQ86TC9 1320 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 RPTORQ8N122 1335 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 GOLGA6L4A6NEF3 574 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 CXCL11O14625 94 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 CCNT1O60563 726 aaKnown RBP7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 CNMDO75829 334 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 BMP15O95972 392 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 HOXA7P31268 230 aaPredicted RBP7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 SREBF1P36956 1147 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 AP3B2Q13367 1082 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 COG2Q14746 738 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 CAMK4Q16566 473 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 ARMC9Q7Z3E5 817 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 CPXCR1Q8N123 301 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 PROCA1Q8NCQ7 364 aaPredicted RBP7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 HAS1Q92839 578 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 FERMT2Q96AC1 680 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 EPSTI1Q96J88 318 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 MTMR9Q96QG7 549 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 GLT8D2Q9H1C3 349 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 NUP62CLQ9H1M0 184 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 GBA2Q9HCG7 927 aaPredicted RBP7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 DDX19AQ9NUU7 478 aaKnown RBP7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 TMOD4Q9NZQ9 345 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 BTBD7Q9P203 1132 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 CEP131Q9UPN4 1083 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 WDR81Q562E7 1941 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 ZNFX1Q9P2E3 1918 aaKnown RBP7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 DOCK5Q9H7D0 1870 aa7.85□□□□□ -1.15
TOPBP1-203ENST00000503464 FRMPD4Q14CM0 1322 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 CYP3A7-CYP3A51PA0A087WV96 503 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 VWA3AA6NCI4 1184 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 UNCXA6NJT0 531 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 PP2D1A8MPX8 630 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 FAM86B1E9PN63 330 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms