RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 USH1GQ495M9 461 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 USP17L6PQ6QN14 398 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 PLA2G4DQ86XP0 818 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 MLKLQ8NB16 471 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 TRPM4Q8TD43 1214 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 GLIS2Q9BZE0 524 aaPredicted RBP24.87■■□□□ 1.57
PTPN13-205ENST00000502971 TRIM5Q9C035 493 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 STAT6P42226 847 aa24.86■■□□□ 1.57
PTPN13-205ENST00000502971 FXR2P51116 673 aaKnown RBP eCLIP24.86■■□□□ 1.57
PTPN13-205ENST00000502971 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.86■■□□□ 1.57
PTPN13-205ENST00000502971 FAM43AQ8N2R8 423 aa24.86■■□□□ 1.57
PTPN13-205ENST00000502971 LPAR1Q92633 364 aa24.86■■□□□ 1.57
PTPN13-205ENST00000502971 GSDMAQ96QA5 445 aa24.86■■□□□ 1.57
PTPN13-205ENST00000502971 ANO3Q9BYT9 981 aa24.86■■□□□ 1.57
PTPN13-205ENST00000502971 KIAA1683Q9H0B3 1180 aa24.86■■□□□ 1.57
PTPN13-205ENST00000502971 SLC37A4O43826 429 aa24.86■■□□□ 1.57
PTPN13-205ENST00000502971 ZNF75DP51815 510 aa24.86■■□□□ 1.57
PTPN13-205ENST00000502971 KARSQ15046 597 aaKnown RBP24.86■■□□□ 1.57
PTPN13-205ENST00000502971 TMEM266Q2M3C6 531 aa24.86■■□□□ 1.57
PTPN13-205ENST00000502971 RRAGBQ5VZM2 374 aa24.86■■□□□ 1.57
PTPN13-205ENST00000502971 MOXD1Q6UVY6 613 aa24.86■■□□□ 1.57
PTPN13-205ENST00000502971 IGSF22Q8N9C0 903 aa24.86■■□□□ 1.57
PTPN13-205ENST00000502971 DDX25Q9UHL0 483 aaKnown RBP24.86■■□□□ 1.57
PTPN13-205ENST00000502971 ZNF112Q9UJU3 913 aa24.86■■□□□ 1.57
PTPN13-205ENST00000502971 ESPNB1AK53 854 aa24.85■■□□□ 1.57
PTPN13-205ENST00000502971 GTPBP6O43824 516 aaPredicted RBP24.85■■□□□ 1.57
PTPN13-205ENST00000502971 BMP6P22004 513 aa24.85■■□□□ 1.57
PTPN13-205ENST00000502971 CDC25AP30304 524 aa24.85■■□□□ 1.57
PTPN13-205ENST00000502971 CT47A1Q5JQC4 288 aaPredicted RBP24.85■■□□□ 1.57
PTPN13-205ENST00000502971 RASSF8Q8NHQ8 419 aa24.85■■□□□ 1.57
PTPN13-205ENST00000502971 KIFC2Q96AC6 838 aa24.85■■□□□ 1.57
PTPN13-205ENST00000502971 RAB34Q9BZG1 259 aa24.85■■□□□ 1.57
PTPN13-205ENST00000502971 CUEDC2Q9H467 287 aa24.85■■□□□ 1.57
PTPN13-205ENST00000502971 IQCA1LA6NCM1 817 aa24.84■■□□□ 1.57
PTPN13-205ENST00000502971 PIK3CDO00329 1044 aa24.84■■□□□ 1.57
PTPN13-205ENST00000502971 WDR46O15213 610 aaKnown RBP24.84■■□□□ 1.57
PTPN13-205ENST00000502971 TECP42680 631 aa24.84■■□□□ 1.57
PTPN13-205ENST00000502971 PDIA5Q14554 519 aa24.84■■□□□ 1.57
PTPN13-205ENST00000502971 CCDC84Q86UT8 332 aaPredicted RBP24.84■■□□□ 1.57
PTPN13-205ENST00000502971 CABP7Q86V35 215 aa24.84■■□□□ 1.57
PTPN13-205ENST00000502971 ZSCAN30Q86W11 494 aa24.84■■□□□ 1.57
PTPN13-205ENST00000502971 MAGEF1Q9HAY2 307 aa24.84■■□□□ 1.57
PTPN13-205ENST00000502971 CYP3A7-CYP3A51PA0A087WV96 503 aa24.83■■□□□ 1.57
PTPN13-205ENST00000502971 PP2D1A8MPX8 630 aa24.83■■□□□ 1.57
PTPN13-205ENST00000502971 CYP3A7P24462 503 aa24.83■■□□□ 1.57
PTPN13-205ENST00000502971 TXKP42681 527 aa24.83■■□□□ 1.57
PTPN13-205ENST00000502971 NCAPHQ15003 741 aa24.83■■□□□ 1.57
PTPN13-205ENST00000502971 SPDYE3A6NKU9 549 aa24.83■■□□□ 1.57
PTPN13-205ENST00000502971 GOLGA6L6A8MZA4 724 aa24.83■■□□□ 1.57
PTPN13-205ENST00000502971 MYL1P05976 194 aa24.83■■□□□ 1.57
PTPN13-205ENST00000502971 CDC25BP30305 580 aa24.83■■□□□ 1.57
PTPN13-205ENST00000502971 MYL5Q02045 173 aa24.83■■□□□ 1.57
PTPN13-205ENST00000502971 MBOAT7Q96N66 472 aa24.83■■□□□ 1.57
PTPN13-205ENST00000502971 GGA3Q9NZ52 723 aa24.83■■□□□ 1.57
PTPN13-205ENST00000502971 OPLAHO14841 1288 aa24.82■■□□□ 1.56
PTPN13-205ENST00000502971 USP50Q70EL3 339 aaPredicted RBP24.82■■□□□ 1.56
PTPN13-205ENST00000502971 SCYL3Q8IZE3 742 aa24.82■■□□□ 1.56
PTPN13-205ENST00000502971 CRYGNQ8WXF5 182 aa24.82■■□□□ 1.56
PTPN13-205ENST00000502971 MYH7BA7E2Y1 1941 aa24.82■■□□□ 1.56
PTPN13-205ENST00000502971 PITPNM2Q9BZ72 1349 aa24.82■■□□□ 1.56
PTPN13-205ENST00000502971 TPM3P06753 285 aa24.81■■□□□ 1.56
PTPN13-205ENST00000502971 INPP5BP32019 993 aa24.81■■□□□ 1.56
PTPN13-205ENST00000502971 HIRAP54198 1017 aaPredicted RBP24.81■■□□□ 1.56
PTPN13-205ENST00000502971 USP14P54578 494 aa24.81■■□□□ 1.56
PTPN13-205ENST00000502971 NAALADL2Q58DX5 795 aa24.81■■□□□ 1.56
PTPN13-205ENST00000502971 MRFAP1L1Q96HT8 127 aa24.81■■□□□ 1.56
PTPN13-205ENST00000502971 MTRQ99707 1265 aa24.81■■□□□ 1.56
PTPN13-205ENST00000502971 LRWD1Q9UFC0 647 aa24.81■■□□□ 1.56
PTPN13-205ENST00000502971 MRPL11Q9Y3B7 192 aaKnown RBP24.81■■□□□ 1.56
PTPN13-205ENST00000502971 CCDC174Q6PII3 467 aa24.81■■□□□ 1.56
PTPN13-205ENST00000502971 CALML4Q96GE6 196 aa24.81■■□□□ 1.56
PTPN13-205ENST00000502971 WDR18Q9BV38 432 aa24.81■■□□□ 1.56
PTPN13-205ENST00000502971 AS3MTQ9HBK9 375 aa24.81■■□□□ 1.56
PTPN13-205ENST00000502971 DOCK1Q14185 1865 aa24.8■■□□□ 1.56
PTPN13-205ENST00000502971 SCN4AP35499 1836 aa24.8■■□□□ 1.56
PTPN13-205ENST00000502971 ABCB11O95342 1321 aa24.8■■□□□ 1.56
PTPN13-205ENST00000502971 SREBF1P36956 1147 aa24.8■■□□□ 1.56
PTPN13-205ENST00000502971 ARHGAP4P98171 946 aa24.8■■□□□ 1.56
PTPN13-205ENST00000502971 PRPF38AQ8NAV1 312 aaKnown RBP24.8■■□□□ 1.56
PTPN13-205ENST00000502971 RMND1Q9NWS8 449 aa24.8■■□□□ 1.56
PTPN13-205ENST00000502971 ERCC5P28715 1186 aaPredicted RBP24.79■■□□□ 1.56
PTPN13-205ENST00000502971 SEMA3FQ13275 785 aa24.79■■□□□ 1.56
PTPN13-205ENST00000502971 ZC3H15Q8WU90 426 aaKnown RBP24.79■■□□□ 1.56
PTPN13-205ENST00000502971 STAMQ92783 540 aa24.79■■□□□ 1.56
PTPN13-205ENST00000502971 HAS1Q92839 578 aa24.79■■□□□ 1.56
PTPN13-205ENST00000502971 SLF1Q9BQI6 1058 aa24.79■■□□□ 1.56
PTPN13-205ENST00000502971 TTC12Q9H892 705 aaPredicted RBP24.79■■□□□ 1.56
PTPN13-205ENST00000502971 PICK1Q9NRD5 415 aa24.79■■□□□ 1.56
PTPN13-205ENST00000502971 FBXO28Q9NVF7 368 aa24.79■■□□□ 1.56
PTPN13-205ENST00000502971 KBTBD4Q9NVX7 518 aa24.79■■□□□ 1.56
PTPN13-205ENST00000502971 MARCH6O60337 910 aa24.78■■□□□ 1.56
PTPN13-205ENST00000502971 PLCG1P19174 1290 aa24.78■■□□□ 1.56
PTPN13-205ENST00000502971 CASP1P29466 404 aa24.78■■□□□ 1.56
PTPN13-205ENST00000502971 EPHX2P34913 555 aa24.78■■□□□ 1.56
PTPN13-205ENST00000502971 CUL4BQ13620 913 aa24.78■■□□□ 1.56
PTPN13-205ENST00000502971 SUPT20HL1Q3ZLR7 823 aa24.78■■□□□ 1.56
PTPN13-205ENST00000502971 WRNIP1Q96S55 665 aa24.78■■□□□ 1.56
PTPN13-205ENST00000502971 P2RX7Q99572 595 aaKnown RBP24.78■■□□□ 1.56
PTPN13-205ENST00000502971 MMTAG2Q9BU76 263 aaKnown RBP24.78■■□□□ 1.56
PTPN13-205ENST00000502971 BLZF1Q9H2G9 400 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms