RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 SPRED1Q7Z699 444 aa6.29□□□□□ -1.4
PROM1-203ENST00000502943 Q8N1X5 172 aa6.29□□□□□ -1.4
PROM1-203ENST00000502943 FIBCD1Q8N539 461 aa6.29□□□□□ -1.4
PROM1-203ENST00000502943 NLGN2Q8NFZ4 835 aa6.29□□□□□ -1.4
PROM1-203ENST00000502943 ST6GALNAC2Q9UJ37 374 aa6.29□□□□□ -1.4
PROM1-203ENST00000502943 TBC1D8O95759 1140 aa6.28□□□□□ -1.4
PROM1-203ENST00000502943 TACR2P21452 398 aa6.28□□□□□ -1.4
PROM1-203ENST00000502943 NOP2P46087 812 aaKnown RBP6.28□□□□□ -1.4
PROM1-203ENST00000502943 ZNF165P49910 485 aa6.28□□□□□ -1.4
PROM1-203ENST00000502943 CACNB2Q08289 660 aaPredicted RBP6.28□□□□□ -1.4
PROM1-203ENST00000502943 AXDND1Q5T1B0 1012 aaPredicted RBP6.28□□□□□ -1.4
PROM1-203ENST00000502943 CHST13Q8NET6 341 aa6.28□□□□□ -1.4
PROM1-203ENST00000502943 CPA5Q8WXQ8 436 aa6.28□□□□□ -1.4
PROM1-203ENST00000502943 DDX11Q96FC9 970 aa6.28□□□□□ -1.4
PROM1-203ENST00000502943 DHRS1Q96LJ7 313 aa6.28□□□□□ -1.4
PROM1-203ENST00000502943 GP6Q9HCN6 339 aa6.28□□□□□ -1.4
PROM1-203ENST00000502943 FAM86C1Q9NVL1 165 aa6.28□□□□□ -1.4
PROM1-203ENST00000502943 RWDD3Q9Y3V2 267 aa6.28□□□□□ -1.4
PROM1-203ENST00000502943 PMS1P54277 932 aaKnown RBP6.27□□□□□ -1.41
PROM1-203ENST00000502943 RGL3Q3MIN7 710 aa6.27□□□□□ -1.41
PROM1-203ENST00000502943 ZFPM1Q8IX07 1006 aa6.27□□□□□ -1.41
PROM1-203ENST00000502943 SH3RF3Q8TEJ3 882 aaPredicted RBP6.27□□□□□ -1.41
PROM1-203ENST00000502943 DVL3Q92997 716 aaPredicted RBP6.27□□□□□ -1.41
PROM1-203ENST00000502943 SYT3Q9BQG1 590 aa6.27□□□□□ -1.41
PROM1-203ENST00000502943 MENTQ9BUN1 341 aa6.27□□□□□ -1.41
PROM1-203ENST00000502943 MRIQ9BWK5 157 aa6.27□□□□□ -1.41
PROM1-203ENST00000502943 SSBP3Q9BWW4 388 aaPredicted RBP6.27□□□□□ -1.41
PROM1-203ENST00000502943 INVSQ9Y283 1065 aa6.27□□□□□ -1.41
PROM1-203ENST00000502943 FHOD1Q9Y613 1164 aa6.27□□□□□ -1.41
PROM1-203ENST00000502943 TP53P04637 393 aaPredicted RBP6.26□□□□□ -1.41
PROM1-203ENST00000502943 GDF5P43026 501 aa6.26□□□□□ -1.41
PROM1-203ENST00000502943 DNAJC14Q6Y2X3 702 aaPredicted RBP6.26□□□□□ -1.41
PROM1-203ENST00000502943 LIMS2Q7Z4I7 341 aa6.26□□□□□ -1.41
PROM1-203ENST00000502943 CABP7Q86V35 215 aa6.26□□□□□ -1.41
PROM1-203ENST00000502943 RGS22Q8NE09 1264 aa6.26□□□□□ -1.41
PROM1-203ENST00000502943 ZDHHC15Q96MV8 337 aa6.26□□□□□ -1.41
PROM1-203ENST00000502943 NOL6Q9H6R4 1146 aaKnown RBP6.26□□□□□ -1.41
PROM1-203ENST00000502943 SMARCA5O60264 1052 aaPredicted RBP6.25□□□□□ -1.41
PROM1-203ENST00000502943 C8BP07358 591 aa6.25□□□□□ -1.41
PROM1-203ENST00000502943 SND1Q7KZF4 910 aaKnown RBP eCLIP6.25□□□□□ -1.41
PROM1-203ENST00000502943 LZTR1Q8N653 840 aa6.25□□□□□ -1.41
PROM1-203ENST00000502943 LINC00482Q8N8I6 264 aa6.25□□□□□ -1.41
PROM1-203ENST00000502943 NKD1Q969G9 470 aa6.25□□□□□ -1.41
PROM1-203ENST00000502943 PEX11GQ96HA9 241 aa6.25□□□□□ -1.41
PROM1-203ENST00000502943 GORASP1Q9BQQ3 440 aa6.25□□□□□ -1.41
PROM1-203ENST00000502943 ZNF451Q9Y4E5 1061 aa6.25□□□□□ -1.41
PROM1-203ENST00000502943 PPP1R11O60927 126 aaPredicted RBP6.24□□□□□ -1.41
PROM1-203ENST00000502943 CD247P20963 164 aa6.24□□□□□ -1.41
PROM1-203ENST00000502943 TRIM26Q12899 539 aaPredicted RBP6.24□□□□□ -1.41
PROM1-203ENST00000502943 CDSNQ15517 529 aa6.24□□□□□ -1.41
PROM1-203ENST00000502943 ANKRD39Q53RE8 183 aa6.24□□□□□ -1.41
PROM1-203ENST00000502943 INTS3Q68E01 1043 aaKnown RBP6.24□□□□□ -1.41
PROM1-203ENST00000502943 SLITRK4Q8IW52 837 aa6.24□□□□□ -1.41
PROM1-203ENST00000502943 NETO2Q8NC67 525 aa6.24□□□□□ -1.41
PROM1-203ENST00000502943 SMARCC1Q92922 1105 aaPredicted RBP6.24□□□□□ -1.41
PROM1-203ENST00000502943 GGT7Q9UJ14 662 aa6.24□□□□□ -1.41
PROM1-203ENST00000502943 NUDT5Q9UKK9 219 aa6.24□□□□□ -1.41
PROM1-203ENST00000502943 SF3B6Q9Y3B4 125 aaKnown RBP6.24□□□□□ -1.41
PROM1-203ENST00000502943 ZNF536O15090 1300 aa6.24□□□□□ -1.41
PROM1-203ENST00000502943 CYP2C8P10632 490 aa6.23□□□□□ -1.41
PROM1-203ENST00000502943 THBS2P35442 1172 aa6.23□□□□□ -1.41
PROM1-203ENST00000502943 ACVRL1P37023 503 aa6.23□□□□□ -1.41
PROM1-203ENST00000502943 POU4F1Q01851 419 aa6.23□□□□□ -1.41
PROM1-203ENST00000502943 PPP2R5DQ14738 602 aa6.23□□□□□ -1.41
PROM1-203ENST00000502943 SLC9A5Q14940 896 aa6.23□□□□□ -1.41
PROM1-203ENST00000502943 CRIP3Q6Q6R5 217 aa6.23□□□□□ -1.41
PROM1-203ENST00000502943 LGI4Q8N135 537 aa6.23□□□□□ -1.41
PROM1-203ENST00000502943 MCMBPQ9BTE3 642 aa6.23□□□□□ -1.41
PROM1-203ENST00000502943 GULP1Q9UBP9 304 aa6.23□□□□□ -1.41
PROM1-203ENST00000502943 SIT1Q9Y3P8 196 aa6.23□□□□□ -1.41
PROM1-203ENST00000502943 ITGA4P13612 1032 aa6.22□□□□□ -1.41
PROM1-203ENST00000502943 RPL13P26373 211 aaKnown RBP6.22□□□□□ -1.41
PROM1-203ENST00000502943 ZYXQ15942 572 aaKnown RBP6.22□□□□□ -1.41
PROM1-203ENST00000502943 C9orf131Q5VYM1 1079 aa6.22□□□□□ -1.41
PROM1-203ENST00000502943 MCTP2Q6DN12 878 aa6.22□□□□□ -1.41
PROM1-203ENST00000502943 GLB1LQ6UWU2 654 aa6.22□□□□□ -1.41
PROM1-203ENST00000502943 KISS1RQ969F8 398 aaPredicted RBP6.22□□□□□ -1.41
PROM1-203ENST00000502943 MTA3Q9BTC8 594 aa6.22□□□□□ -1.41
PROM1-203ENST00000502943 C11orf84Q9BUA3 381 aaPredicted RBP6.22□□□□□ -1.41
PROM1-203ENST00000502943 MROH6A6NGR9 719 aa6.21□□□□□ -1.42
PROM1-203ENST00000502943 STXBP3O00186 592 aa6.21□□□□□ -1.42
PROM1-203ENST00000502943 CYR61O00622 381 aa6.21□□□□□ -1.42
PROM1-203ENST00000502943 KIAA2012Q0VF49 1180 aa6.21□□□□□ -1.42
PROM1-203ENST00000502943 WWC2Q6AWC2 1192 aa6.21□□□□□ -1.42
PROM1-203ENST00000502943 RCSD1Q6JBY9 416 aa6.21□□□□□ -1.42
PROM1-203ENST00000502943 BORAQ6PGQ7 559 aa6.21□□□□□ -1.42
PROM1-203ENST00000502943 STK32CQ86UX6 486 aa6.21□□□□□ -1.42
PROM1-203ENST00000502943 NT5C1AQ9BXI3 368 aa6.21□□□□□ -1.42
PROM1-203ENST00000502943 ZNRF3Q9ULT6 936 aa6.21□□□□□ -1.42
PROM1-203ENST00000502943 TSC22D4Q9Y3Q8 395 aa6.21□□□□□ -1.42
PROM1-203ENST00000502943 PATL2C9JE40 543 aaKnown RBP6.2□□□□□ -1.42
PROM1-203ENST00000502943 ZBTB7AO95365 584 aa6.2□□□□□ -1.42
PROM1-203ENST00000502943 ICAM4Q14773 271 aa6.2□□□□□ -1.42
PROM1-203ENST00000502943 CRB2Q5IJ48 1285 aa6.2□□□□□ -1.42
PROM1-203ENST00000502943 FAM26FQ5R3K3 315 aa6.2□□□□□ -1.42
PROM1-203ENST00000502943 EEF1DP3Q658K8 133 aa6.2□□□□□ -1.42
PROM1-203ENST00000502943 CPNE8Q86YQ8 564 aa6.2□□□□□ -1.42
PROM1-203ENST00000502943 FAM26EQ8N5C1 309 aa6.2□□□□□ -1.42
PROM1-203ENST00000502943 ADCY4Q8NFM4 1077 aa6.2□□□□□ -1.42
PROM1-203ENST00000502943 SLITRK6Q9H5Y7 841 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms