RNA–Protein interactions for RNA: ENST00000498414.5

RPP21-229, Transcript of ribonuclease P/MRP subunit p21, human

TSL 5

Gene RPP21, Length 1,492 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPP21-229	ENST00000498414	CMTR1	Q8N1G2	835 aa	Known RBP	27.65	■■■□□ 2.02
RPP21-229	ENST00000498414	ANKLE1	Q8NAG6	615 aa		27.65	■■■□□ 2.02
RPP21-229	ENST00000498414	RRP36	Q96EU6	259 aa	Known RBP	27.65	■■■□□ 2.02
RPP21-229	ENST00000498414	RBM28	Q9NW13	759 aa	Known RBP	27.65	■■■□□ 2.02
RPP21-229	ENST00000498414	CYP46A1	Q9Y6A2	500 aa		27.65	■■■□□ 2.02
RPP21-229	ENST00000498414	OPLAH	O14841	1288 aa		27.64	■■■□□ 2.02
RPP21-229	ENST00000498414	RTN1	Q16799	776 aa		27.64	■■■□□ 2.02
RPP21-229	ENST00000498414	C8orf34	Q49A92	452 aa		27.64	■■■□□ 2.02
RPP21-229	ENST00000498414	MCF2L2	Q86YR7	1114 aa		27.64	■■■□□ 2.02
RPP21-229	ENST00000498414	PIBF1	Q8WXW3	757 aa		27.64	■■■□□ 2.02
RPP21-229	ENST00000498414	TBC1D5	Q92609	795 aa		27.64	■■■□□ 2.02
RPP21-229	ENST00000498414	ADD3	Q9UEY8	706 aa	Known RBP	27.64	■■■□□ 2.02
RPP21-229	ENST00000498414	NID2	Q14112	1375 aa		27.64	■■■□□ 2.01
RPP21-229	ENST00000498414	PDE4DIP	Q5VU43	2346 aa		27.64	■■■□□ 2.01
RPP21-229	ENST00000498414	GOLGA8A	A7E2F4	631 aa		27.64	■■■□□ 2.01
RPP21-229	ENST00000498414	GOLGA8B	A8MQT2	603 aa		27.64	■■■□□ 2.01
RPP21-229	ENST00000498414	ALDH5A1	P51649	535 aa	Predicted RBP	27.64	■■■□□ 2.01
RPP21-229	ENST00000498414	ANAPC15	P60006	121 aa		27.64	■■■□□ 2.01
RPP21-229	ENST00000498414	MORC4	Q8TE76	937 aa		27.64	■■■□□ 2.01
RPP21-229	ENST00000498414	UPF3B	Q9BZI7	483 aa	Known RBP	27.64	■■■□□ 2.01
RPP21-229	ENST00000498414	KATNBL1	Q9H079	304 aa		27.64	■■■□□ 2.01
RPP21-229	ENST00000498414	ABHD16B	Q9H3Z7	469 aa		27.64	■■■□□ 2.01
RPP21-229	ENST00000498414	ZHX1	Q9UKY1	873 aa	Predicted RBP	27.64	■■■□□ 2.01
RPP21-229	ENST00000498414	LOC102724159	A0A0B4J2E5	919 aa		27.63	■■■□□ 2.01
RPP21-229	ENST00000498414	GHRHR	Q02643	423 aa		27.63	■■■□□ 2.01
RPP21-229	ENST00000498414	PWP2	Q15269	919 aa	Known RBP	27.63	■■■□□ 2.01
RPP21-229	ENST00000498414	DDX49	Q9Y6V7	483 aa	Known RBP	27.63	■■■□□ 2.01
RPP21-229	ENST00000498414	MNX1	P50219	401 aa	Predicted RBP	27.62	■■■□□ 2.01
RPP21-229	ENST00000498414	ACVR2B	Q13705	512 aa		27.62	■■■□□ 2.01
RPP21-229	ENST00000498414	IL17RA	Q96F46	866 aa		27.62	■■■□□ 2.01
RPP21-229	ENST00000498414	FAM217B	Q9NTX9	383 aa	Predicted RBP	27.62	■■■□□ 2.01
RPP21-229	ENST00000498414	SEC63	Q9UGP8	760 aa	Known RBP	27.62	■■■□□ 2.01
RPP21-229	ENST00000498414	NAP1L2	Q9ULW6	460 aa	Predicted RBP	27.62	■■■□□ 2.01
RPP21-229	ENST00000498414	CNTNAP5	Q8WYK1	1306 aa		27.62	■■■□□ 2.01
RPP21-229	ENST00000498414	AKR1A1	P14550	325 aa		27.61	■■■□□ 2.01
RPP21-229	ENST00000498414	TOB2	Q14106	344 aa	Predicted RBP	27.61	■■■□□ 2.01
RPP21-229	ENST00000498414	ANO1	Q5XXA6	986 aa		27.61	■■■□□ 2.01
RPP21-229	ENST00000498414	DNER	Q8NFT8	737 aa		27.61	■■■□□ 2.01
RPP21-229	ENST00000498414	SYTL5	Q8TDW5	730 aa	Predicted RBP	27.61	■■■□□ 2.01
RPP21-229	ENST00000498414	DIS3L	Q8TF46	1054 aa	Known RBP	27.61	■■■□□ 2.01
RPP21-229	ENST00000498414	CDC27	P30260	824 aa		27.6	■■■□□ 2.01
RPP21-229	ENST00000498414	METAP2	P50579	478 aa	Known RBP eCLIP	27.6	■■■□□ 2.01
RPP21-229	ENST00000498414	HSD17B4	P51659	736 aa		27.6	■■■□□ 2.01
RPP21-229	ENST00000498414	EVC	P57679	992 aa		27.6	■■■□□ 2.01
RPP21-229	ENST00000498414	FUT2	Q10981	343 aa		27.6	■■■□□ 2.01
RPP21-229	ENST00000498414	CCDC82	Q8N4S0	544 aa		27.6	■■■□□ 2.01
RPP21-229	ENST00000498414	COL20A1	Q9P218	1284 aa		27.6	■■■□□ 2.01
RPP21-229	ENST00000498414	CFB	P00751	764 aa		27.59	■■■□□ 2.01
RPP21-229	ENST00000498414	FAM184B	Q9ULE4	1060 aa		27.59	■■■□□ 2.01
RPP21-229	ENST00000498414	MKI67	P46013	3256 aa	Known RBP	27.59	■■■□□ 2.01
RPP21-229	ENST00000498414	ALPK3	Q96L96	1907 aa		27.58	■■■□□ 2.01
RPP21-229	ENST00000498414	PPP2R5B	Q15173	497 aa		27.58	■■■□□ 2.01
RPP21-229	ENST00000498414	SAMD3	Q8N6K7	520 aa		27.58	■■■□□ 2.01
RPP21-229	ENST00000498414	PAWR	Q96IZ0	340 aa	Known RBP	27.58	■■■□□ 2.01
RPP21-229	ENST00000498414	hCG_1642624	A0A1W2PR95	340 aa		27.57	■■■□□ 2
RPP21-229	ENST00000498414	RARB	P10826	455 aa		27.57	■■■□□ 2
RPP21-229	ENST00000498414	EDNRB	P24530	442 aa		27.57	■■■□□ 2
RPP21-229	ENST00000498414	CCDC144B	Q3MJ40	725 aa		27.57	■■■□□ 2
RPP21-229	ENST00000498414	LENG1	Q96BZ8	264 aa	Predicted RBP	27.57	■■■□□ 2
RPP21-229	ENST00000498414	TAAR1	Q96RJ0	339 aa		27.57	■■■□□ 2
RPP21-229	ENST00000498414	PDRG1	Q9NUG6	133 aa		27.57	■■■□□ 2
RPP21-229	ENST00000498414	MAP3K20	Q9NYL2	800 aa	Known RBP	27.57	■■■□□ 2
RPP21-229	ENST00000498414	FBXO16	Q8IX29	292 aa	Predicted RBP	27.57	■■■□□ 2
RPP21-229	ENST00000498414	VTA1	Q9NP79	307 aa		27.57	■■■□□ 2
RPP21-229	ENST00000498414	KIAA1217	Q5T5P2	1943 aa		27.56	■■■□□ 2
RPP21-229	ENST00000498414	ADCY6	O43306	1168 aa		27.56	■■■□□ 2
RPP21-229	ENST00000498414	ADD1	P35611	737 aa	Known RBP	27.56	■■■□□ 2
RPP21-229	ENST00000498414	NECAB2	Q7Z6G3	386 aa		27.56	■■■□□ 2
RPP21-229	ENST00000498414	MPHOSPH6	Q99547	160 aa	Known RBP	27.56	■■■□□ 2
RPP21-229	ENST00000498414	XPNPEP3	Q9NQH7	507 aa		27.56	■■■□□ 2
RPP21-229	ENST00000498414	CCDC196	A0A1B0GTZ2	297 aa		27.55	■■■□□ 2
RPP21-229	ENST00000498414	PDIA3	P30101	505 aa	Known RBP	27.55	■■■□□ 2
RPP21-229	ENST00000498414	EEPD1	Q7L9B9	569 aa		27.55	■■■□□ 2
RPP21-229	ENST00000498414	ARRDC4	Q8NCT1	418 aa		27.55	■■■□□ 2
RPP21-229	ENST00000498414	NSUN6	Q8TEA1	469 aa	Known RBP	27.55	■■■□□ 2
RPP21-229	ENST00000498414		B4DLN1	442 aa		27.54	■■■□□ 2
RPP21-229	ENST00000498414	GCOM1	H8Y6P7	765 aa	Predicted RBP	27.54	■■■□□ 2
RPP21-229	ENST00000498414	POLR2M	P0CAP2	368 aa		27.54	■■■□□ 2
RPP21-229	ENST00000498414	HOXA13	P31271	388 aa	Predicted RBP	27.54	■■■□□ 2
RPP21-229	ENST00000498414	MRPL12	P52815	198 aa	Known RBP	27.54	■■■□□ 2
RPP21-229	ENST00000498414	PDE4D	Q08499	809 aa		27.54	■■■□□ 2
RPP21-229	ENST00000498414	TAPT1	Q6NXT6	567 aa		27.54	■■■□□ 2
RPP21-229	ENST00000498414	RMDN3	Q96TC7	470 aa		27.54	■■■□□ 2
RPP21-229	ENST00000498414	C11orf49	Q9H6J7	331 aa		27.54	■■■□□ 2
RPP21-229	ENST00000498414	GTF3C3	Q9Y5Q9	886 aa		27.54	■■■□□ 2
RPP21-229	ENST00000498414	DNM1L	O00429	736 aa		27.53	■■■□□ 2
RPP21-229	ENST00000498414	DUSP11	O75319	330 aa	Known RBP	27.53	■■■□□ 2
RPP21-229	ENST00000498414	COL6A1	P12109	1028 aa		27.53	■■■□□ 2
RPP21-229	ENST00000498414	LRRC41	Q15345	812 aa		27.53	■■■□□ 2
RPP21-229	ENST00000498414	GJC2	Q5T442	439 aa	Predicted RBP	27.53	■■■□□ 2
RPP21-229	ENST00000498414	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	27.53	■■■□□ 2
RPP21-229	ENST00000498414	PDGFC	Q9NRA1	345 aa		27.53	■■■□□ 2
RPP21-229	ENST00000498414	SYNRG	Q9UMZ2	1314 aa		27.52	■■■□□ 2
RPP21-229	ENST00000498414	ADCYAP1R1	P41586	468 aa		27.52	■■■□□ 2
RPP21-229	ENST00000498414	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	27.52	■■■□□ 2
RPP21-229	ENST00000498414	PXMP2	Q9NR77	195 aa		27.52	■■■□□ 2
RPP21-229	ENST00000498414		V9GY48	417 aa	Predicted RBP	27.52	■■■□□ 2
RPP21-229	ENST00000498414	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	27.51	■■■□□ 2
RPP21-229	ENST00000498414	ADAMTS4	O75173	837 aa		27.51	■■■□□ 2
RPP21-229	ENST00000498414	PGK1	P00558	417 aa		27.51	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms