RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ENPP3O14638 875 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 MSL3P1P0C860 447 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 PNLIPP16233 465 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 HSD3B2P26439 372 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 PDE6BP35913 854 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 SEPHS1P49903 392 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 MVKQ03426 396 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 CYP4F3Q08477 520 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 SSRP1Q08945 709 aaKnown RBP5.89□□□□□ -1.47
SMC4-225ENST00000497203 SCRN1Q12765 414 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 PKN1Q16512 942 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 SLC10A6Q3KNW5 377 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 ADGRF1Q5T601 910 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 GTF2IRD2BQ6EKJ0 949 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 POMZP3Q6PJE2 187 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 GTF2IRD2Q86UP8 949 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 JAMLQ86YT9 394 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 NLGN1Q8N2Q7 840 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 THAP3Q8WTV1 239 aaPredicted RBP5.89□□□□□ -1.47
SMC4-225ENST00000497203 BTN2A2Q8WVV5 523 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 RNPC3Q96LT9 517 aaKnown RBP5.89□□□□□ -1.47
SMC4-225ENST00000497203 EPB41L4BQ9H329 900 aa5.89□□□□□ -1.47
SMC4-225ENST00000497203 TBC1D8O95759 1140 aa5.88□□□□□ -1.47
SMC4-225ENST00000497203 NCLP19338 710 aaKnown RBP5.88□□□□□ -1.47
SMC4-225ENST00000497203 C2orf27AQ580R0 203 aa5.88□□□□□ -1.47
SMC4-225ENST00000497203 HOMER1Q86YM7 354 aa5.88□□□□□ -1.47
SMC4-225ENST00000497203 LRRC47Q8N1G4 583 aaKnown RBP5.88□□□□□ -1.47
SMC4-225ENST00000497203 CRACR2BQ8N4Y2 399 aaPredicted RBP5.88□□□□□ -1.47
SMC4-225ENST00000497203 FBXO15Q8NCQ5 510 aaPredicted RBP5.88□□□□□ -1.47
SMC4-225ENST00000497203 SH3TC2Q8TF17 1288 aa5.88□□□□□ -1.47
SMC4-225ENST00000497203 COPS5Q92905 334 aa5.88□□□□□ -1.47
SMC4-225ENST00000497203 SGSM3Q96HU1 749 aa5.88□□□□□ -1.47
SMC4-225ENST00000497203 FAM84AQ96KN4 292 aa5.88□□□□□ -1.47
SMC4-225ENST00000497203 NKX2-4Q9H2Z4 354 aa5.88□□□□□ -1.47
SMC4-225ENST00000497203 GPRC5CQ9NQ84 441 aa5.88□□□□□ -1.47
SMC4-225ENST00000497203 LRP2BPQ9P2M1 347 aa5.88□□□□□ -1.47
SMC4-225ENST00000497203 KDM2BQ8NHM5 1336 aa5.88□□□□□ -1.47
SMC4-225ENST00000497203 CYP4F8P98187 520 aa5.87□□□□□ -1.47
SMC4-225ENST00000497203 LAPTM5Q13571 262 aa5.87□□□□□ -1.47
SMC4-225ENST00000497203 LONRF2Q1L5Z9 754 aa5.87□□□□□ -1.47
SMC4-225ENST00000497203 TAF7LQ5H9L4 462 aa5.87□□□□□ -1.47
SMC4-225ENST00000497203 ZC3H12BQ5HYM0 836 aaKnown RBP5.87□□□□□ -1.47
SMC4-225ENST00000497203 EGFLAMQ63HQ2 1017 aa5.87□□□□□ -1.47
SMC4-225ENST00000497203 ZNF605Q86T29 641 aa5.87□□□□□ -1.47
SMC4-225ENST00000497203 CPNE8Q86YQ8 564 aa5.87□□□□□ -1.47
SMC4-225ENST00000497203 CILP2Q8IUL8 1156 aa5.87□□□□□ -1.47
SMC4-225ENST00000497203 KSR1Q8IVT5 923 aa5.87□□□□□ -1.47
SMC4-225ENST00000497203 LILRB2Q8N423 598 aa5.87□□□□□ -1.47
SMC4-225ENST00000497203 APPBP2Q92624 585 aa5.87□□□□□ -1.47
SMC4-225ENST00000497203 ZNF552Q9H707 407 aaPredicted RBP5.87□□□□□ -1.47
SMC4-225ENST00000497203 CYP26B1Q9NR63 512 aa5.87□□□□□ -1.47
SMC4-225ENST00000497203 CLEC1BQ9P126 229 aa5.87□□□□□ -1.47
SMC4-225ENST00000497203 PFDN2Q9UHV9 154 aa5.87□□□□□ -1.47
SMC4-225ENST00000497203 MYOCOSA0A1B0GUC4 107 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 A0A1W2PQ27 194 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 A0A1W2PQ64 194 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 A0A1W2PQC6 194 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 A0A1W2PQD8 194 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 OR14I1A6ND48 311 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 THBDP07204 575 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 PLS3P13797 630 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 PAMP19021 973 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 L1CAMP32004 1257 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 ERVFRD-1P60508 538 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 SF1Q15637 639 aaKnown RBP5.86□□□□□ -1.47
SMC4-225ENST00000497203 MBLAC2Q68D91 279 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 SYDE1Q6ZW31 735 aaPredicted RBP5.86□□□□□ -1.47
SMC4-225ENST00000497203 SPATC1Q76KD6 591 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 JMYQ8N9B5 988 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 ZSWIM2Q8NEG5 633 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 BHLHE22Q8NFJ8 381 aaPredicted RBP5.86□□□□□ -1.47
SMC4-225ENST00000497203 FRS2Q8WU20 508 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 SPATA9Q9BWV2 254 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 MCOLN1Q9GZU1 580 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 TNFRSF12AQ9NP84 129 aa5.86□□□□□ -1.47
SMC4-225ENST00000497203 NPHP3-ACAD11A0A0J9YXS1 232 aa5.85□□□□□ -1.47
SMC4-225ENST00000497203 PPP1R11O60927 126 aaPredicted RBP5.85□□□□□ -1.47
SMC4-225ENST00000497203 CDC45O75419 566 aa5.85□□□□□ -1.47
SMC4-225ENST00000497203 KRT1P04264 644 aa5.85□□□□□ -1.47
SMC4-225ENST00000497203 CAPNS1P04632 268 aa5.85□□□□□ -1.47
SMC4-225ENST00000497203 TACR1P25103 407 aa5.85□□□□□ -1.47
SMC4-225ENST00000497203 ARL4AP40617 200 aa5.85□□□□□ -1.47
SMC4-225ENST00000497203 GRIA2P42262 883 aa5.85□□□□□ -1.47
SMC4-225ENST00000497203 PLEKHG4Q58EX7 1191 aa5.85□□□□□ -1.47
SMC4-225ENST00000497203 SYNPOQ8N3V7 929 aa5.85□□□□□ -1.47
SMC4-225ENST00000497203 NPLOC4Q8TAT6 608 aa5.85□□□□□ -1.47
SMC4-225ENST00000497203 SLC26A8Q96RN1 970 aa5.85□□□□□ -1.47
SMC4-225ENST00000497203 SLC38A3Q99624 504 aa5.85□□□□□ -1.47
SMC4-225ENST00000497203 SLKQ9H2G2 1235 aaPredicted RBP5.85□□□□□ -1.47
SMC4-225ENST00000497203 TMEM260Q9NX78 707 aa5.85□□□□□ -1.47
SMC4-225ENST00000497203 CCDC163A0A0D9SF12 145 aa5.84□□□□□ -1.47
SMC4-225ENST00000497203 A0A1W2PQU0 124 aa5.84□□□□□ -1.47
SMC4-225ENST00000497203 ANKRD62A6NC57 917 aa5.84□□□□□ -1.47
SMC4-225ENST00000497203 NUDT19A8MXV4 375 aa5.84□□□□□ -1.47
SMC4-225ENST00000497203 ARNTLO00327 626 aa5.84□□□□□ -1.47
SMC4-225ENST00000497203 DIAPH1O60610 1272 aaKnown RBP5.84□□□□□ -1.47
SMC4-225ENST00000497203 SNRPB2P08579 225 aaKnown RBP5.84□□□□□ -1.47
SMC4-225ENST00000497203 ECI1P42126 302 aa5.84□□□□□ -1.47
SMC4-225ENST00000497203 CORO7P57737 925 aa5.84□□□□□ -1.47
SMC4-225ENST00000497203 PPP2R2AP63151 447 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms