RNA–Protein interactions for RNA: ENST00000495298.1

GTF3C2-213, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 2

Gene GTF3C2, Length 1,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-213ENST00000495298 IL27Q8NEV9 243 aa11.2□□□□□ -0.62
GTF3C2-213ENST00000495298 STAG1Q8WVM7 1258 aa11.2□□□□□ -0.62
GTF3C2-213ENST00000495298 FAM122AQ96E09 287 aa11.2□□□□□ -0.62
GTF3C2-213ENST00000495298 GMCL1Q96IK5 515 aa11.2□□□□□ -0.62
GTF3C2-213ENST00000495298 PRR12Q9ULL5 1215 aa11.2□□□□□ -0.62
GTF3C2-213ENST00000495298 TNKSO95271 1327 aa11.19□□□□□ -0.62
GTF3C2-213ENST00000495298 NFIBO00712 420 aa11.19□□□□□ -0.62
GTF3C2-213ENST00000495298 ERC2O15083 957 aa11.19□□□□□ -0.62
GTF3C2-213ENST00000495298 APPP05067 770 aa11.19□□□□□ -0.62
GTF3C2-213ENST00000495298 SLC1A4P43007 532 aa11.19□□□□□ -0.62
GTF3C2-213ENST00000495298 PURAQ00577 322 aaKnown RBP11.19□□□□□ -0.62
GTF3C2-213ENST00000495298 IKQ13123 557 aaPredicted RBP11.19□□□□□ -0.62
GTF3C2-213ENST00000495298 IQSEC1Q6DN90 963 aa11.19□□□□□ -0.62
GTF3C2-213ENST00000495298 TTBK2Q6IQ55 1244 aa11.19□□□□□ -0.62
GTF3C2-213ENST00000495298 NSMFQ6X4W1 530 aa11.19□□□□□ -0.62
GTF3C2-213ENST00000495298 KIAA1211Q6ZU35 1233 aa11.19□□□□□ -0.62
GTF3C2-213ENST00000495298 TMCO2Q7Z6W1 182 aaPredicted RBP11.19□□□□□ -0.62
GTF3C2-213ENST00000495298 MORC4Q8TE76 937 aa11.19□□□□□ -0.62
GTF3C2-213ENST00000495298 IL17RBQ9NRM6 502 aa11.19□□□□□ -0.62
GTF3C2-213ENST00000495298 SYNPO2Q9UMS6 1093 aa11.19□□□□□ -0.62
GTF3C2-213ENST00000495298 MTMR7Q9Y216 660 aa11.19□□□□□ -0.62
GTF3C2-213ENST00000495298 MUC6Q6W4X9 2439 aa11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 PATL2C9JE40 543 aaKnown RBP11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 POU3F3P20264 500 aaPredicted RBP11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 SLC16A2P36021 539 aa11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 ALDH5A1P51649 535 aaPredicted RBP11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 TAP1Q03518 808 aa11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 CTDSPL2Q05D32 466 aa11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 PPARAQ07869 468 aa11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 DUSP28Q4G0W2 176 aa11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 TMEM67Q5HYA8 995 aa11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 SLC30A10Q6XR72 485 aa11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 FAM160B2Q86V87 743 aa11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 RPUSD2Q8IZ73 545 aaKnown RBP11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 OTUD7AQ8TE49 926 aaPredicted RBP11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 ARNTL2Q8WYA1 636 aa11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 COPS5Q92905 334 aa11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 LRFN3Q9BTN0 628 aa11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 C11orf16Q9NQ32 467 aa11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 CCPG1Q9ULG6 757 aa11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 Q9Y3F1 56 aa11.18□□□□□ -0.62
GTF3C2-213ENST00000495298 LCHNA4D1U4 455 aa11.17□□□□□ -0.62
GTF3C2-213ENST00000495298 TLL1O43897 1013 aa11.17□□□□□ -0.62
GTF3C2-213ENST00000495298 ZEB2O60315 1214 aa11.17□□□□□ -0.62
GTF3C2-213ENST00000495298 LPXNO60711 386 aa11.17□□□□□ -0.62
GTF3C2-213ENST00000495298 MYL3P08590 195 aa11.17□□□□□ -0.62
GTF3C2-213ENST00000495298 FDX1P10109 184 aa11.17□□□□□ -0.62
GTF3C2-213ENST00000495298 BAATQ14032 418 aaPredicted RBP11.17□□□□□ -0.62
GTF3C2-213ENST00000495298 TCTN1Q2MV58 587 aa11.17□□□□□ -0.62
GTF3C2-213ENST00000495298 NBPF20Q3BBV1 942 aa11.17□□□□□ -0.62
GTF3C2-213ENST00000495298 TKFCQ3LXA3 575 aa11.17□□□□□ -0.62
GTF3C2-213ENST00000495298 MIER1Q8N108 512 aa11.17□□□□□ -0.62
GTF3C2-213ENST00000495298 CHURC1Q8WUH1 139 aa11.17□□□□□ -0.62
GTF3C2-213ENST00000495298 CTAGE1Q96RT6 745 aa11.17□□□□□ -0.62
GTF3C2-213ENST00000495298 WDR11Q9BZH6 1224 aa11.17□□□□□ -0.62
GTF3C2-213ENST00000495298 VTA1Q9NP79 307 aa11.17□□□□□ -0.62
GTF3C2-213ENST00000495298 CD320Q9NPF0 282 aa11.17□□□□□ -0.62
GTF3C2-213ENST00000495298 STX8Q9UNK0 236 aa11.17□□□□□ -0.62
GTF3C2-213ENST00000495298 FAM86C2PA6NEL3 165 aa11.16□□□□□ -0.62
GTF3C2-213ENST00000495298 PLA2G6O60733 806 aa11.16□□□□□ -0.62
GTF3C2-213ENST00000495298 IQCF3P0C7M6 154 aa11.16□□□□□ -0.62
GTF3C2-213ENST00000495298 GNAT2P19087 354 aa11.16□□□□□ -0.62
GTF3C2-213ENST00000495298 PDE4BQ07343 736 aa11.16□□□□□ -0.62
GTF3C2-213ENST00000495298 GRB10Q13322 594 aa11.16□□□□□ -0.62
GTF3C2-213ENST00000495298 GPNMBQ14956 572 aa11.16□□□□□ -0.62
GTF3C2-213ENST00000495298 FAM47CQ5HY64 1035 aa11.16□□□□□ -0.62
GTF3C2-213ENST00000495298 VPS53Q5VIR6 699 aa11.16□□□□□ -0.62
GTF3C2-213ENST00000495298 RCSD1Q6JBY9 416 aa11.16□□□□□ -0.62
GTF3C2-213ENST00000495298 HERC6Q8IVU3 1022 aa11.16□□□□□ -0.62
GTF3C2-213ENST00000495298 OR6J1Q8NGC5 347 aa11.16□□□□□ -0.62
GTF3C2-213ENST00000495298 CLEC4DQ8WXI8 215 aa11.16□□□□□ -0.62
GTF3C2-213ENST00000495298 NAPBQ9H115 298 aa11.16□□□□□ -0.62
GTF3C2-213ENST00000495298 TSPYL2Q9H2G4 693 aaPredicted RBP11.16□□□□□ -0.62
GTF3C2-213ENST00000495298 RANBP17Q9H2T7 1088 aaKnown RBP11.16□□□□□ -0.62
GTF3C2-213ENST00000495298 ZNF287Q9HBT7 754 aa11.16□□□□□ -0.62
GTF3C2-213ENST00000495298 PIEZO1Q92508 2521 aa11.15□□□□□ -0.62
GTF3C2-213ENST00000495298 FRMPD2Q68DX3 1309 aaPredicted RBP11.15□□□□□ -0.62
GTF3C2-213ENST00000495298 RBM47A0AV96 593 aaKnown RBP11.15□□□□□ -0.62
GTF3C2-213ENST00000495298 ARIH2O95376 493 aa11.15□□□□□ -0.62
GTF3C2-213ENST00000495298 ICAM1P05362 532 aa11.15□□□□□ -0.62
GTF3C2-213ENST00000495298 ZFYP08048 801 aaPredicted RBP11.15□□□□□ -0.62
GTF3C2-213ENST00000495298 PFKMP08237 780 aa11.15□□□□□ -0.62
GTF3C2-213ENST00000495298 MS4A1P11836 297 aa11.15□□□□□ -0.62
GTF3C2-213ENST00000495298 NOVP48745 357 aa11.15□□□□□ -0.62
GTF3C2-213ENST00000495298 CCDC96Q2M329 555 aa11.15□□□□□ -0.62
GTF3C2-213ENST00000495298 PI4K2BQ8TCG2 481 aa11.15□□□□□ -0.62
GTF3C2-213ENST00000495298 GDPD5Q8WTR4 605 aa11.15□□□□□ -0.62
GTF3C2-213ENST00000495298 SLC9A7Q96T83 725 aa11.15□□□□□ -0.62
GTF3C2-213ENST00000495298 MTG1Q9BT17 334 aaPredicted RBP11.15□□□□□ -0.62
GTF3C2-213ENST00000495298 C1QTNF1Q9BXJ1 281 aa11.15□□□□□ -0.62
GTF3C2-213ENST00000495298 SEZ6LQ9BYH1 1024 aa11.15□□□□□ -0.62
GTF3C2-213ENST00000495298 TSPY2A6NKD2 308 aa11.14□□□□□ -0.63
GTF3C2-213ENST00000495298 GTPBP6O43824 516 aaPredicted RBP11.14□□□□□ -0.63
GTF3C2-213ENST00000495298 SUPT20HL2P0C7V6 817 aa11.14□□□□□ -0.63
GTF3C2-213ENST00000495298 CALML3P27482 149 aa11.14□□□□□ -0.63
GTF3C2-213ENST00000495298 DEFB103AP81534 67 aa11.14□□□□□ -0.63
GTF3C2-213ENST00000495298 AAK1Q2M2I8 961 aa11.14□□□□□ -0.63
GTF3C2-213ENST00000495298 ZMYM1Q5SVZ6 1142 aa11.14□□□□□ -0.63
GTF3C2-213ENST00000495298 DHX38Q92620 1227 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms