RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 USP17L22D6RA61 530 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 USP17L17D6RBQ6 530 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 USP17L19D6RCP7 530 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 USP17L20D6RJB6 530 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 KLRC4O43908 158 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 TAL1P17542 331 aaPredicted RBP12□□□□□ -0.49
PRPF4B-209ENST00000494674 PLCG1P19174 1290 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 RPS12P25398 132 aaKnown RBP12□□□□□ -0.49
PRPF4B-209ENST00000494674 HOXD11P31277 338 aaPredicted RBP12□□□□□ -0.49
PRPF4B-209ENST00000494674 CAP2P40123 477 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 TECP42680 631 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 USP17L24Q0WX57 530 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 CALCRLQ16602 461 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 RRAGBQ5VZM2 374 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 USP17L6PQ6QN14 398 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 MIGA2Q7L4E1 593 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 CABP7Q86V35 215 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 SPICE1Q8N0Z3 855 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 MBOAT7Q96N66 472 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 AMNQ9BXJ7 453 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 GLT8D2Q9H1C3 349 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 ARHGEF10LQ9HCE6 1279 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 PPP1R1BQ9UD71 204 aaPredicted RBP12□□□□□ -0.49
PRPF4B-209ENST00000494674 PRR12Q9ULL5 1215 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 BCS1LQ9Y276 419 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 NFE2L3Q9Y4A8 694 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 PHF20L1A8MW92 1017 aa11.99□□□□□ -0.49
PRPF4B-209ENST00000494674 FZD9O00144 591 aa11.99□□□□□ -0.49
PRPF4B-209ENST00000494674 RPN1P04843 607 aaKnown RBP11.99□□□□□ -0.49
PRPF4B-209ENST00000494674 GMPSP49915 693 aaPredicted RBP11.99□□□□□ -0.49
PRPF4B-209ENST00000494674 APTXQ7Z2E3 356 aaKnown RBP11.99□□□□□ -0.49
PRPF4B-209ENST00000494674 HAS1Q92839 578 aa11.99□□□□□ -0.49
PRPF4B-209ENST00000494674 ANO3Q9BYT9 981 aa11.99□□□□□ -0.49
PRPF4B-209ENST00000494674 GLIS2Q9BZE0 524 aaPredicted RBP11.99□□□□□ -0.49
PRPF4B-209ENST00000494674 SCAF8Q9UPN6 1271 aaKnown RBP11.99□□□□□ -0.49
PRPF4B-209ENST00000494674 ASTN2O75129 1339 aaPredicted RBP11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 SYNRGQ9UMZ2 1314 aa11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 GCFC2P16383 781 aaKnown RBP11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 TXKP42681 527 aa11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 GRB10Q13322 594 aa11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 RASA3Q14644 834 aa11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 NOLC1Q14978 699 aaKnown RBP eCLIP11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 FAM83BQ5T0W9 1011 aa11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 FBXO11Q86XK2 927 aa11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 LRRC8AQ8IWT6 810 aa11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 NLGN2Q8NFZ4 835 aa11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 NAP1L5Q96NT1 182 aaPredicted RBP11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 PNMA5Q96PV4 448 aa11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 PLIN2Q99541 437 aa11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 CUEDC2Q9H467 287 aa11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 VCPKMTQ9H867 229 aa11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 MAGEF1Q9HAY2 307 aa11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 IMPACTQ9P2X3 320 aa11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 PHIPQ8WWQ0 1821 aa11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 ZNF541Q9H0D2 1346 aa11.98□□□□□ -0.49
PRPF4B-209ENST00000494674 UTRNP46939 3433 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 CYP3A7-CYP3A51PA0A087WV96 503 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 MYL1P05976 194 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 CYP3A7P24462 503 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 CCZ1BP86790 482 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 CCZ1P86791 482 aaPredicted RBP11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 AP3B2Q13367 1082 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 ZNF658Q5TYW1 1059 aaPredicted RBP11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 CDKAL1Q5VV42 579 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 FILIP1Q7Z7B0 1213 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 MICALL2Q8IY33 904 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 GOPCQ9HD26 462 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 SAMSN1Q9NSI8 373 aaKnown RBP11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 DDX25Q9UHL0 483 aaKnown RBP11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 PSDA5PKW4 1024 aaPredicted RBP11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 POTEMA6NI47 508 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 PLA2G6O60733 806 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 STAT2P52630 851 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 UBASH3AP57075 661 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 PDIA5Q14554 519 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 KCNB1Q14721 858 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 USH1GQ495M9 461 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 HSP90AA4PQ58FG1 418 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 SPATA1Q5VX52 437 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 ARMCX5Q6P1M9 558 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 MOXD1Q6UVY6 613 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 SAMD7Q7Z3H4 446 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 TMC6Q7Z403 805 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 CCDC84Q86UT8 332 aaPredicted RBP11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 NUDT12Q9BQG2 462 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 RANBP17Q9H2T7 1088 aaKnown RBP11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 KCNMB3Q9NPA1 279 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 BLOC1S4Q9NUP1 217 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 RMND1Q9NWS8 449 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 LRWD1Q9UFC0 647 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 GDAQ9Y2T3 454 aa11.97□□□□□ -0.49
PRPF4B-209ENST00000494674 RLFQ13129 1914 aa11.96□□□□□ -0.49
PRPF4B-209ENST00000494674 PIK3CDO00329 1044 aa11.96□□□□□ -0.49
PRPF4B-209ENST00000494674 CBFA2T2O43439 604 aa11.96□□□□□ -0.49
PRPF4B-209ENST00000494674 ASNSP08243 561 aa11.96□□□□□ -0.49
PRPF4B-209ENST00000494674 USP11P51784 963 aa11.96□□□□□ -0.49
PRPF4B-209ENST00000494674 IKQ13123 557 aaPredicted RBP11.96□□□□□ -0.49
PRPF4B-209ENST00000494674 KMT5BQ4FZB7 885 aa11.96□□□□□ -0.49
PRPF4B-209ENST00000494674 TMEM119Q4V9L6 283 aa11.96□□□□□ -0.49
PRPF4B-209ENST00000494674 KLHL10Q6JEL2 608 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms