RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 HOXA7P31268 230 aaPredicted RBP23.45■■□□□ 1.35
KPNA1-210ENST00000494339 SNAPC2Q13487 334 aa23.45■■□□□ 1.35
KPNA1-210ENST00000494339 FCHSD1Q86WN1 690 aa23.45■■□□□ 1.35
KPNA1-210ENST00000494339 AGTPBP1Q9UPW5 1226 aa23.45■■□□□ 1.35
KPNA1-210ENST00000494339 MYPNQ86TC9 1320 aa23.45■■□□□ 1.34
KPNA1-210ENST00000494339 FSD2A1L4K1 749 aa23.45■■□□□ 1.34
KPNA1-210ENST00000494339 GCOM1H8Y6P7 765 aaPredicted RBP23.45■■□□□ 1.34
KPNA1-210ENST00000494339 NFIBO00712 420 aa23.45■■□□□ 1.34
KPNA1-210ENST00000494339 CUTAO60888 179 aa23.45■■□□□ 1.34
KPNA1-210ENST00000494339 POLR2MP0CAP2 368 aa23.45■■□□□ 1.34
KPNA1-210ENST00000494339 MOGSQ13724 837 aa23.45■■□□□ 1.34
KPNA1-210ENST00000494339 TMEM132BQ14DG7 1078 aa23.45■■□□□ 1.34
KPNA1-210ENST00000494339 FASTKD5Q7L8L6 764 aaKnown RBP23.45■■□□□ 1.34
KPNA1-210ENST00000494339 MRPS27Q92552 414 aaKnown RBP23.45■■□□□ 1.34
KPNA1-210ENST00000494339 SRPRBQ9Y5M8 271 aaKnown RBP23.45■■□□□ 1.34
KPNA1-210ENST00000494339 A0A1B0GVL5 298 aa23.44■■□□□ 1.34
KPNA1-210ENST00000494339 EDIL3O43854 480 aa23.44■■□□□ 1.34
KPNA1-210ENST00000494339 NR1I2O75469 434 aa23.44■■□□□ 1.34
KPNA1-210ENST00000494339 IRX3P78415 501 aaPredicted RBP23.44■■□□□ 1.34
KPNA1-210ENST00000494339 MUM1L1Q5H9M0 696 aa23.44■■□□□ 1.34
KPNA1-210ENST00000494339 CLEC4DQ8WXI8 215 aa23.44■■□□□ 1.34
KPNA1-210ENST00000494339 DACT1Q9NYF0 836 aa23.44■■□□□ 1.34
KPNA1-210ENST00000494339 ZNF214Q9UL59 606 aaPredicted RBP23.44■■□□□ 1.34
KPNA1-210ENST00000494339 SPECC1Q5M775 1068 aa23.43■■□□□ 1.34
KPNA1-210ENST00000494339 SNRNP48Q6IEG0 339 aaKnown RBP23.43■■□□□ 1.34
KPNA1-210ENST00000494339 SHC4Q6S5L8 630 aa23.43■■□□□ 1.34
KPNA1-210ENST00000494339 CCDC73Q6ZRK6 1079 aa23.43■■□□□ 1.34
KPNA1-210ENST00000494339 C4orf32Q8N8J7 132 aa23.43■■□□□ 1.34
KPNA1-210ENST00000494339 TRERF1Q96PN7 1200 aa23.43■■□□□ 1.34
KPNA1-210ENST00000494339 PNMA2Q9UL42 364 aa23.43■■□□□ 1.34
KPNA1-210ENST00000494339 RIPK3Q9Y572 518 aa23.43■■□□□ 1.34
KPNA1-210ENST00000494339 TDP2O95551 362 aa23.43■■□□□ 1.34
KPNA1-210ENST00000494339 FOSP01100 380 aaPredicted RBP23.43■■□□□ 1.34
KPNA1-210ENST00000494339 PLS1Q14651 629 aa23.43■■□□□ 1.34
KPNA1-210ENST00000494339 CCDC183Q5T5S1 534 aa23.43■■□□□ 1.34
KPNA1-210ENST00000494339 L1TD1Q5T7N2 865 aaKnown RBP23.43■■□□□ 1.34
KPNA1-210ENST00000494339 MCTP2Q6DN12 878 aa23.43■■□□□ 1.34
KPNA1-210ENST00000494339 ASCC2Q9H1I8 757 aaPredicted RBP23.43■■□□□ 1.34
KPNA1-210ENST00000494339 TMEM60Q9H2L4 133 aa23.43■■□□□ 1.34
KPNA1-210ENST00000494339 MORC2Q9Y6X9 1032 aaPredicted RBP23.43■■□□□ 1.34
KPNA1-210ENST00000494339 CMA1P23946 247 aa23.42■■□□□ 1.34
KPNA1-210ENST00000494339 YY1P25490 414 aa23.42■■□□□ 1.34
KPNA1-210ENST00000494339 OAZ1P54368 228 aa23.42■■□□□ 1.34
KPNA1-210ENST00000494339 HUNKP57058 714 aa23.42■■□□□ 1.34
KPNA1-210ENST00000494339 VWA3AA6NCI4 1184 aa23.41■■□□□ 1.34
KPNA1-210ENST00000494339 NEMFO60524 1076 aa23.41■■□□□ 1.34
KPNA1-210ENST00000494339 PEX10O60683 326 aa23.41■■□□□ 1.34
KPNA1-210ENST00000494339 LETM1O95202 739 aaPredicted RBP23.41■■□□□ 1.34
KPNA1-210ENST00000494339 GPAT2Q6NUI2 795 aa23.41■■□□□ 1.34
KPNA1-210ENST00000494339 POTEEQ6S8J3 1075 aa23.41■■□□□ 1.34
KPNA1-210ENST00000494339 FERMT2Q96AC1 680 aa23.41■■□□□ 1.34
KPNA1-210ENST00000494339 CSRNP2Q9H175 543 aa23.41■■□□□ 1.34
KPNA1-210ENST00000494339 NDUFA8P51970 172 aa23.41■■□□□ 1.34
KPNA1-210ENST00000494339 FAM160A1Q05DH4 1040 aa23.41■■□□□ 1.34
KPNA1-210ENST00000494339 MCF2L2Q86YR7 1114 aa23.41■■□□□ 1.34
KPNA1-210ENST00000494339 TEX13BQ9BXU2 312 aa23.41■■□□□ 1.34
KPNA1-210ENST00000494339 RNF146Q9NTX7 359 aa23.41■■□□□ 1.34
KPNA1-210ENST00000494339 KIF3CO14782 793 aa23.4■■□□□ 1.34
KPNA1-210ENST00000494339 ATP2A1O14983 1001 aa23.4■■□□□ 1.34
KPNA1-210ENST00000494339 SLC37A4O43826 429 aa23.4■■□□□ 1.34
KPNA1-210ENST00000494339 PFKFB1P16118 471 aa23.4■■□□□ 1.34
KPNA1-210ENST00000494339 ARHGAP4P98171 946 aa23.4■■□□□ 1.34
KPNA1-210ENST00000494339 SNW1Q13573 536 aaKnown RBP23.4■■□□□ 1.34
KPNA1-210ENST00000494339 IL17AQ16552 155 aa23.4■■□□□ 1.34
KPNA1-210ENST00000494339 RESP18Q5W5W9 173 aa23.4■■□□□ 1.34
KPNA1-210ENST00000494339 POTEDQ86YR6 584 aa23.4■■□□□ 1.34
KPNA1-210ENST00000494339 TEX2Q8IWB9 1127 aa23.4■■□□□ 1.34
KPNA1-210ENST00000494339 RBBP6Q7Z6E9 1792 aaKnown RBP23.4■■□□□ 1.34
KPNA1-210ENST00000494339 SREBF1P36956 1147 aa23.39■■□□□ 1.34
KPNA1-210ENST00000494339 STAT3P40763 770 aa23.39■■□□□ 1.34
KPNA1-210ENST00000494339 HSD17B4P51659 736 aa23.39■■□□□ 1.34
KPNA1-210ENST00000494339 GTF2A2P52657 109 aa23.39■■□□□ 1.34
KPNA1-210ENST00000494339 SPRYD7Q5W111 196 aa23.39■■□□□ 1.34
KPNA1-210ENST00000494339 ARL6IP4Q66PJ3 421 aaKnown RBP23.39■■□□□ 1.34
KPNA1-210ENST00000494339 LBX2Q6XYB7 198 aa23.39■■□□□ 1.34
KPNA1-210ENST00000494339 ZNF579Q8NAF0 562 aaKnown RBP23.39■■□□□ 1.34
KPNA1-210ENST00000494339 ZNF784Q8NCA9 323 aaPredicted RBP23.39■■□□□ 1.34
KPNA1-210ENST00000494339 ENGASEQ8NFI3 743 aa23.39■■□□□ 1.34
KPNA1-210ENST00000494339 MS4A4AQ96JQ5 239 aa23.39■■□□□ 1.34
KPNA1-210ENST00000494339 A0A0G2JMZ2 1700 aa23.39■■□□□ 1.34
KPNA1-210ENST00000494339 CETPP11597 493 aa23.39■■□□□ 1.33
KPNA1-210ENST00000494339 HERVK_113P62684 666 aa23.39■■□□□ 1.33
KPNA1-210ENST00000494339 PABPC4Q13310 644 aaKnown RBP eCLIP23.39■■□□□ 1.33
KPNA1-210ENST00000494339 PPP4R3AQ6IN85 833 aa23.39■■□□□ 1.33
KPNA1-210ENST00000494339 CRYGNQ8WXF5 182 aa23.39■■□□□ 1.33
KPNA1-210ENST00000494339 BTBD7Q9P203 1132 aa23.39■■□□□ 1.33
KPNA1-210ENST00000494339 CCL15-CCL14A0A0B4J2E2 113 aa23.38■■□□□ 1.33
KPNA1-210ENST00000494339 LAD1O00515 517 aa23.38■■□□□ 1.33
KPNA1-210ENST00000494339 OR52Z1P0C646 297 aa23.38■■□□□ 1.33
KPNA1-210ENST00000494339 USP11P51784 963 aa23.38■■□□□ 1.33
KPNA1-210ENST00000494339 ORC2Q13416 577 aaPredicted RBP23.38■■□□□ 1.33
KPNA1-210ENST00000494339 CCL15Q16663 113 aa23.38■■□□□ 1.33
KPNA1-210ENST00000494339 NSMFQ6X4W1 530 aa23.38■■□□□ 1.33
KPNA1-210ENST00000494339 FMR1NBQ8N0W7 255 aaPredicted RBP23.38■■□□□ 1.33
KPNA1-210ENST00000494339 DDX25Q9UHL0 483 aaKnown RBP23.38■■□□□ 1.33
KPNA1-210ENST00000494339 PASKQ96RG2 1323 aa23.38■■□□□ 1.33
KPNA1-210ENST00000494339 OSBPP22059 807 aa23.37■■□□□ 1.33
KPNA1-210ENST00000494339 UBXN2AP68543 259 aa23.37■■□□□ 1.33
KPNA1-210ENST00000494339 CAMK4Q16566 473 aa23.37■■□□□ 1.33
KPNA1-210ENST00000494339 USP49Q70CQ1 688 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms