RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 VAMP4O75379 141 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 ZBTB7AO95365 584 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 CYBBP04839 570 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 HMGB1P09429 215 aaKnown RBP3.52□□□□□ -1.85
LMNB1-207ENST00000494185 YBX3P16989 372 aaKnown RBP eCLIP3.52□□□□□ -1.853e-9■□□□□ 10.7
LMNB1-207ENST00000494185 PRKCAP17252 672 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 PFKLP17858 780 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 RPL11P62913 178 aaKnown RBP3.52□□□□□ -1.85
LMNB1-207ENST00000494185 SCRN1Q12765 414 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 MAP4K2Q12851 820 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 SLC9A5Q14940 896 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 TARBP2Q15633 366 aaKnown RBP3.52□□□□□ -1.85
LMNB1-207ENST00000494185 ACBD5Q5T8D3 534 aaPredicted RBP3.52□□□□□ -1.85
LMNB1-207ENST00000494185 GTF2IRD2BQ6EKJ0 949 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 SPATC1Q76KD6 591 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 SLCO6A1Q86UG4 719 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 GTF2IRD2Q86UP8 949 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 NLGN1Q8N2Q7 840 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 LZTR1Q8N653 840 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 NETO2Q8NC67 525 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 BTN2A2Q8WVV5 523 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 DIO2Q92813 273 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 PEX11GQ96HA9 241 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 HHIPL1Q96JK4 782 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 MRGPRX3Q96LB0 322 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 FCRL3Q96P31 734 aaPredicted RBP3.52□□□□□ -1.85
LMNB1-207ENST00000494185 MMP19Q99542 508 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 DNAJC7Q99615 494 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 SPATA9Q9BWV2 254 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 LGR4Q9BXB1 951 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 RNF32Q9H0A6 362 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 NGRNQ9NPE2 291 aaKnown RBP3.52□□□□□ -1.85
LMNB1-207ENST00000494185 KDM2BQ8NHM5 1336 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 A0A1W2PQU0 124 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 SRGAP3O43295 1099 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 TBX1O43435 398 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 IFNGR1P15260 489 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 LTBRP36941 435 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 ERVFRD-1P60508 538 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 PPP2R2AP63151 447 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 RTP2Q5QGT7 225 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 MROH9Q5TGP6 573 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 ZC3H14Q6PJT7 736 aaKnown RBP3.51□□□□□ -1.85
LMNB1-207ENST00000494185 PAQR3Q6TCH7 311 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 RSPO2Q6UXX9 243 aaPredicted RBP3.51□□□□□ -1.85
LMNB1-207ENST00000494185 EP400NLQ6ZTU2 488 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 NLRX1Q86UT6 975 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 TMEM151BQ8IW70 566 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 PPIL6Q8IXY8 311 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 POU5F2Q8N7G0 328 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 NLGN2Q8NFZ4 835 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 ZSCAN18Q8TBC5 510 aaPredicted RBP3.51□□□□□ -1.85
LMNB1-207ENST00000494185 CHAMP1Q96JM3 812 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 TOX2Q96NM4 488 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 FMNL2Q96PY5 1086 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 DIRC2Q96SL1 478 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 ZFYVE21Q9BQ24 234 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 YIPF4Q9BSR8 244 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 ALG1Q9BT22 464 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.51□□□□□ -1.85
LMNB1-207ENST00000494185 IMPACTQ9P2X3 320 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 ACSL6Q9UKU0 697 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 FAN1Q9Y2M0 1017 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 ZNF281Q9Y2X9 895 aa3.51□□□□□ -1.85
LMNB1-207ENST00000494185 KRIT1O00522 736 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 AQP7O14520 342 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 GSTA4O15217 222 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 PSPNO60542 156 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 DIAPH1O60610 1272 aaKnown RBP3.5□□□□□ -1.85
LMNB1-207ENST00000494185 TSPAN15O95858 294 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 SCG5P05408 212 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 FGFR1P11362 822 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 ECI1P42126 302 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 RAP1GAPP47736 663 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 SUMO1P63165 101 aaKnown RBP3.5□□□□□ -1.85
LMNB1-207ENST00000494185 RAB3GAP1Q15042 981 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 SKIDA1Q1XH10 827 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 ZPBP2Q6X784 338 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 ZNF605Q86T29 641 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 NOP9Q86U38 636 aaKnown RBP3.5□□□□□ -1.85
LMNB1-207ENST00000494185 ZC3H18Q86VM9 953 aaKnown RBP3.5□□□□□ -1.85
LMNB1-207ENST00000494185 ANKLE2Q86XL3 938 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 ZSWIM2Q8NEG5 633 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 THAP3Q8WTV1 239 aaPredicted RBP3.5□□□□□ -1.85
LMNB1-207ENST00000494185 COPS5Q92905 334 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 MCMBPQ9BTE3 642 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 G6PC3Q9BUM1 346 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 RNF38Q9H0F5 515 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 PIF1Q9H611 641 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 C19orf44Q9H6X5 657 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 ARHGEF4Q9NR80 690 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 C19orf73Q9NVV2 129 aa3.5□□□□□ -1.85
LMNB1-207ENST00000494185 TIMM13Q9Y5L4 95 aaPredicted RBP3.5□□□□□ -1.85
LMNB1-207ENST00000494185 TEX51A0A1B0GUA7 166 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 PRODHO43272 600 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 EFCAB14O75071 495 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 DGKIO75912 1065 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 PLS3P13797 630 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 GLDCP23378 1020 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms