RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 TUBB2BQ9BVA1 445 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 ZNF341Q9BYN7 854 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 DCP1AQ9NPI6 582 aaPredicted RBP12.86□□□□□ -0.35
COL25A1-204ENST00000494183 RRAGDQ9NQL2 400 aaPredicted RBP12.86□□□□□ -0.35
COL25A1-204ENST00000494183 C1orf112Q9NSG2 853 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 ADD3Q9UEY8 706 aaKnown RBP12.86□□□□□ -0.35
COL25A1-204ENST00000494183 CRB1P82279 1406 aa12.86□□□□□ -0.35
COL25A1-204ENST00000494183 NDC80O14777 642 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 TMEM191BP0C7N4 346 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 NR2F2P24468 414 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 SNAP25P60880 206 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 CCDC14Q49A88 953 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 TMEM179Q6ZVK1 233 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 CCDC105Q8IYK2 499 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 KIAA1524Q8TCG1 905 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 IQCDQ96DY2 449 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 CUEDC2Q9H467 287 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 SEPT9Q9UHD8 586 aaPredicted RBP12.85□□□□□ -0.35
COL25A1-204ENST00000494183 UTP11Q9Y3A2 253 aaKnown RBP12.85□□□□□ -0.35
COL25A1-204ENST00000494183 TULP4Q9NRJ4 1543 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 OVOS2A0A0G2JMS6 1433 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 OVOS2A0A0J9YW53 1432 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 OVOS2Q6IE36 1432 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 EIF2AK2P19525 551 aaKnown RBP12.85□□□□□ -0.35
COL25A1-204ENST00000494183 MXRA7P84157 204 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 MKRN3Q13064 507 aaKnown RBP12.85□□□□□ -0.35
COL25A1-204ENST00000494183 SCARF1Q14162 830 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 CFAP221Q4G0U5 840 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 PLEKHA4Q9H4M7 779 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 SYCE1Q8N0S2 351 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 MRFAP1L1Q96HT8 127 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 INO80B-WBP1J3KQ70 363 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 AOC3Q16853 763 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 EPSTI1Q96J88 318 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 FAM84BQ96KN1 310 aaPredicted RBP12.85□□□□□ -0.35
COL25A1-204ENST00000494183 CEP170P1Q96L14 293 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 INO80BQ9C086 356 aaPredicted RBP12.85□□□□□ -0.35
COL25A1-204ENST00000494183 PODXL2Q9NZ53 605 aa12.85□□□□□ -0.35
COL25A1-204ENST00000494183 FOXO4P98177 505 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 ELF2Q15723 593 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 SPOUT1Q5T280 376 aaKnown RBP12.84□□□□□ -0.35
COL25A1-204ENST00000494183 IPO4Q8TEX9 1081 aaKnown RBP12.84□□□□□ -0.35
COL25A1-204ENST00000494183 STAG1Q8WVM7 1258 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 TMEM47Q9BQJ4 181 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 MAGEF1Q9HAY2 307 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 IGSF3O75054 1194 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 HPDP32754 393 aaPredicted RBP12.84□□□□□ -0.35
COL25A1-204ENST00000494183 EN1Q05925 392 aaPredicted RBP12.84□□□□□ -0.35
COL25A1-204ENST00000494183 MAPK8IP2Q13387 824 aaPredicted RBP12.84□□□□□ -0.35
COL25A1-204ENST00000494183 PPP2R5DQ14738 602 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 EXOC3L4Q17RC7 722 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 SLC27A3Q5K4L6 730 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 FAM160B1Q5W0V3 765 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 CNOT6LQ96LI5 555 aaKnown RBP12.84□□□□□ -0.35
COL25A1-204ENST00000494183 TRPM1Q7Z4N2 1603 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 PNMA6FA0A0J9YX94 578 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 hCG_1984214I3L0E3 225 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 TNNC2P02585 160 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 COPB1P53618 953 aaKnown RBP12.84□□□□□ -0.35
COL25A1-204ENST00000494183 C6orf163Q5TEZ5 329 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 ARMC9Q7Z3E5 817 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 ZNF713Q8N859 430 aaPredicted RBP12.84□□□□□ -0.35
COL25A1-204ENST00000494183 ANO3Q9BYT9 981 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 SAR1BQ9Y6B6 198 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 CPDO75976 1380 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 RPAP1Q9BWH6 1393 aaPredicted RBP12.84□□□□□ -0.35
COL25A1-204ENST00000494183 NMT2O60551 498 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 IFNB1P01574 187 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 YWHAEP62258 255 aaKnown RBP12.84□□□□□ -0.35
COL25A1-204ENST00000494183 FKBP3Q00688 224 aaKnown RBP12.84□□□□□ -0.35
COL25A1-204ENST00000494183 IFT20Q8IY31 132 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 NACC1Q96RE7 527 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 AMFRQ9UKV5 643 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 TTLL3Q9Y4R7 772 aa12.84□□□□□ -0.35
COL25A1-204ENST00000494183 RESTQ13127 1097 aa12.83□□□□□ -0.36
COL25A1-204ENST00000494183 TOB2Q14106 344 aaPredicted RBP12.83□□□□□ -0.36
COL25A1-204ENST00000494183 SEPT2Q15019 361 aa12.83□□□□□ -0.36
COL25A1-204ENST00000494183 ECE2O60344 883 aa12.83□□□□□ -0.36
COL25A1-204ENST00000494183 H2AFZP0C0S5 128 aa12.83□□□□□ -0.36
COL25A1-204ENST00000494183 TMTC3Q6ZXV5 915 aa12.83□□□□□ -0.36
COL25A1-204ENST00000494183 H2AFVQ71UI9 128 aa12.83□□□□□ -0.36
COL25A1-204ENST00000494183 TIGD1Q96MW7 591 aa12.83□□□□□ -0.36
COL25A1-204ENST00000494183 ZNF277Q9NRM2 450 aaPredicted RBP12.83□□□□□ -0.36
COL25A1-204ENST00000494183 N4BP1O75113 896 aaKnown RBP12.83□□□□□ -0.36
COL25A1-204ENST00000494183 GAS8O95995 478 aa12.83□□□□□ -0.36
COL25A1-204ENST00000494183 IREB2P48200 963 aaKnown RBP12.83□□□□□ -0.36
COL25A1-204ENST00000494183 PPARDQ03181 441 aa12.83□□□□□ -0.36
COL25A1-204ENST00000494183 PTPN21Q16825 1174 aa12.83□□□□□ -0.36
COL25A1-204ENST00000494183 FAM160B2Q86V87 743 aa12.83□□□□□ -0.36
COL25A1-204ENST00000494183 TICAM2Q86XR7 235 aa12.83□□□□□ -0.36
COL25A1-204ENST00000494183 CDHR1Q96JP9 859 aa12.83□□□□□ -0.36
COL25A1-204ENST00000494183 RIPOR2Q9Y4F9 1068 aa12.83□□□□□ -0.36
COL25A1-204ENST00000494183 SRPRBQ9Y5M8 271 aaKnown RBP12.83□□□□□ -0.36
COL25A1-204ENST00000494183 BUB1O43683 1085 aa12.82□□□□□ -0.36
COL25A1-204ENST00000494183 Q3C1V9 767 aa12.82□□□□□ -0.36
COL25A1-204ENST00000494183 CYB5R4Q7L1T6 521 aa12.82□□□□□ -0.36
COL25A1-204ENST00000494183 SESTD1Q86VW0 696 aa12.82□□□□□ -0.36
COL25A1-204ENST00000494183 MARCH10Q8NA82 808 aaPredicted RBP12.82□□□□□ -0.36
COL25A1-204ENST00000494183 FAM76AQ8TAV0 307 aa12.82□□□□□ -0.36
COL25A1-204ENST00000494183 SLC10A4Q96EP9 437 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms