RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 EXOC1Q9NV70 894 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 MCM9Q9NXL9 1143 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 ATP6V0A2Q9Y487 856 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 EPN1Q9Y6I3 576 aaPredicted RBP12.85□□□□□ -0.35
RFC4-214ENST00000494047 DDX60LQ5H9U9 1706 aaKnown RBP12.85□□□□□ -0.35
RFC4-214ENST00000494047 PLIN4Q96Q06 1357 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 PVALEFA0A1B0GWK0 134 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 A6NNZ2 444 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 M0R2N6 131 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 TEX33O43247 280 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 USO1O60763 962 aaKnown RBP12.84□□□□□ -0.35
RFC4-214ENST00000494047 PARP1P09874 1014 aaKnown RBP12.84□□□□□ -0.35
RFC4-214ENST00000494047 OR52Z1P0C646 297 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 CCNE1P24864 410 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 PLA2G4AP47712 749 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 PRELPP51888 382 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 ZBED6P86452 979 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 PSMD2Q13200 908 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 GRAPQ13588 217 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 NONOQ15233 471 aaKnown RBP eCLIP12.84□□□□□ -0.35
RFC4-214ENST00000494047 TUBB8Q3ZCM7 444 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 MCTP2Q6DN12 878 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 RAD9BQ6WBX8 426 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 USP49Q70CQ1 688 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 SP8Q8IXZ3 490 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 GRAMD1CQ8IYS0 662 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 MB21D1Q8N884 522 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 C4orf32Q8N8J7 132 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 SUPT20HQ8NEM7 779 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 GRAPLQ8TC17 118 aaPredicted RBP12.84□□□□□ -0.35
RFC4-214ENST00000494047 TBC1D22AQ8WUA7 517 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 C7orf25Q9BPX7 421 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 LZTFL1Q9NQ48 299 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 TSKSQ9UJT2 592 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 MYO6Q9UM54 1294 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 STK24Q9Y6E0 443 aa12.84□□□□□ -0.35
RFC4-214ENST00000494047 EIF3CLB5ME19 914 aaKnown RBP12.83□□□□□ -0.36
RFC4-214ENST00000494047 UBE2Q2LH0YL09 131 aa12.83□□□□□ -0.36
RFC4-214ENST00000494047 KIF3CO14782 793 aa12.83□□□□□ -0.36
RFC4-214ENST00000494047 PRDM1O75626 825 aa12.83□□□□□ -0.36
RFC4-214ENST00000494047 TOMM70O94826 608 aa12.83□□□□□ -0.36
RFC4-214ENST00000494047 DYNLL1P63167 89 aaKnown RBP12.83□□□□□ -0.36
RFC4-214ENST00000494047 LRRC63Q05C16 580 aa12.83□□□□□ -0.36
RFC4-214ENST00000494047 KARSQ15046 597 aaKnown RBP12.83□□□□□ -0.36
RFC4-214ENST00000494047 C3orf67Q6ZVT6 689 aa12.83□□□□□ -0.36
RFC4-214ENST00000494047 CMTR1Q8N1G2 835 aaKnown RBP12.83□□□□□ -0.36
RFC4-214ENST00000494047 TRIM58Q8NG06 486 aa12.83□□□□□ -0.36
RFC4-214ENST00000494047 FAM71BQ8TC56 605 aa12.83□□□□□ -0.36
RFC4-214ENST00000494047 RRP36Q96EU6 259 aaKnown RBP12.83□□□□□ -0.36
RFC4-214ENST00000494047 ERGIC2Q96RQ1 377 aa12.83□□□□□ -0.36
RFC4-214ENST00000494047 EIF3CQ99613 913 aaKnown RBP12.83□□□□□ -0.36
RFC4-214ENST00000494047 FUT8Q9BYC5 575 aa12.83□□□□□ -0.36
RFC4-214ENST00000494047 SUGT1Q9Y2Z0 365 aa12.83□□□□□ -0.36
RFC4-214ENST00000494047 SNED1Q8TER0 1413 aa12.83□□□□□ -0.36
RFC4-214ENST00000494047 PALM3A6NDB9 673 aaPredicted RBP12.82□□□□□ -0.36
RFC4-214ENST00000494047 VEGFAP15692 232 aaPredicted RBP12.82□□□□□ -0.36
RFC4-214ENST00000494047 TRIM21P19474 475 aaKnown RBP12.82□□□□□ -0.36
RFC4-214ENST00000494047 OAS2P29728 719 aaKnown RBP12.82□□□□□ -0.36
RFC4-214ENST00000494047 CCT6AP40227 531 aaKnown RBP12.82□□□□□ -0.36
RFC4-214ENST00000494047 PRCPP42785 496 aa12.82□□□□□ -0.36
RFC4-214ENST00000494047 FXR1P51114 621 aaKnown RBP eCLIP12.82□□□□□ -0.36
RFC4-214ENST00000494047 STX17P56962 302 aa12.82□□□□□ -0.36
RFC4-214ENST00000494047 TFAP4Q01664 338 aa12.82□□□□□ -0.36
RFC4-214ENST00000494047 RCSD1Q6JBY9 416 aa12.82□□□□□ -0.36
RFC4-214ENST00000494047 NEK8Q86SG6 692 aa12.82□□□□□ -0.36
RFC4-214ENST00000494047 ZSCAN29Q8IWY8 852 aaPredicted RBP12.82□□□□□ -0.36
RFC4-214ENST00000494047 JDP2Q8WYK2 163 aa12.82□□□□□ -0.36
RFC4-214ENST00000494047 P2RX5Q93086 422 aa12.82□□□□□ -0.36
RFC4-214ENST00000494047 DESI2Q9BSY9 194 aa12.82□□□□□ -0.36
RFC4-214ENST00000494047 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.82□□□□□ -0.36
RFC4-214ENST00000494047 RNF14Q9UBS8 474 aa12.82□□□□□ -0.36
RFC4-214ENST00000494047 MKRN1Q9UHC7 482 aaKnown RBP12.82□□□□□ -0.36
RFC4-214ENST00000494047 ZHX1Q9UKY1 873 aaPredicted RBP12.82□□□□□ -0.36
RFC4-214ENST00000494047 PRLRP16471 622 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 HNRNPH3P31942 346 aaKnown RBP12.81□□□□□ -0.36
RFC4-214ENST00000494047 SPA17Q15506 151 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 ASPRV1Q53RT3 343 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 EARS2Q5JPH6 523 aaKnown RBP12.81□□□□□ -0.36
RFC4-214ENST00000494047 PAPD7Q5XG87 772 aaKnown RBP12.81□□□□□ -0.36
RFC4-214ENST00000494047 LEKR1Q6ZMV7 388 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 KIAA1328Q86T90 577 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 CABP7Q86V35 215 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 SLC35F6Q8N357 371 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 CSGALNACT2Q8N6G5 542 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 GOLGA5Q8TBA6 731 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 ZNF507Q8TCN5 953 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 ALS2CR12Q96Q35 445 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 TSG101Q99816 390 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 RTFDC1Q9BY42 306 aaPredicted RBP12.81□□□□□ -0.36
RFC4-214ENST00000494047 RIC8AQ9NPQ8 531 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 MAD2L2Q9UI95 211 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 PCDHA6Q9UN73 950 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 PCDHA8Q9Y5H6 950 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 SAR1BQ9Y6B6 198 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 FOCADQ5VW36 1801 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 KDM3AQ9Y4C1 1321 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 A0A0U1RQG5 324 aaPredicted RBP12.81□□□□□ -0.36
RFC4-214ENST00000494047 FAM205CA6NFA0 338 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 STXBP3O00186 592 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 GNA14O95837 355 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms