RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 INF2Q27J81 1249 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 RRP12Q5JTH9 1297 aaKnown RBP13.05□□□□□ -0.32
BRCA1-222ENST00000493919 CCDC80Q76M96 950 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 ZNF280CQ8ND82 737 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 VPS37AQ8NEZ2 397 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 FBXO18Q8NFZ0 1043 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 BARX2Q9UMQ3 279 aaPredicted RBP13.05□□□□□ -0.32
BRCA1-222ENST00000493919 ZNF213O14771 459 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 KRT38O76015 456 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 IVLP07476 585 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 HSPA1AP0DMV8 641 aaKnown RBP13.05□□□□□ -0.32
BRCA1-222ENST00000493919 HSPA1BP0DMV9 641 aaKnown RBP13.05□□□□□ -0.32
BRCA1-222ENST00000493919 CETPP11597 493 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 TPP2P29144 1249 aaPredicted RBP13.05□□□□□ -0.32
BRCA1-222ENST00000493919 DGKZQ13574 1117 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 MTMR2Q13614 643 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 ZRSR1Q15695 479 aaKnown RBP13.05□□□□□ -0.32
BRCA1-222ENST00000493919 ZYXQ15942 572 aaKnown RBP13.05□□□□□ -0.32
BRCA1-222ENST00000493919 IMMTQ16891 758 aaKnown RBP13.05□□□□□ -0.32
BRCA1-222ENST00000493919 GADL1Q6ZQY3 521 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 TMEM179Q6ZVK1 233 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 TBC1D10CQ8IV04 446 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 ZNF444Q8N0Y2 327 aaPredicted RBP13.05□□□□□ -0.32
BRCA1-222ENST00000493919 BRI3BPQ8WY22 251 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 TSC1Q92574 1164 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 TAF4BQ92750 862 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 MS4A4AQ96JQ5 239 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 CCDC17Q96LX7 622 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 INCENPQ9NQS7 918 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 KCNH4Q9UQ05 1017 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 ATP8A1Q9Y2Q0 1164 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 TMEM98Q9Y2Y6 226 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 AFG3L2Q9Y4W6 797 aa13.05□□□□□ -0.32
BRCA1-222ENST00000493919 IGF2BP3O00425 579 aaKnown RBP eCLIP13.04□□□□□ -0.32
BRCA1-222ENST00000493919 SLC27A2O14975 620 aa13.04□□□□□ -0.32
BRCA1-222ENST00000493919 ELF1P32519 619 aa13.04□□□□□ -0.32
BRCA1-222ENST00000493919 ATP2B2Q01814 1243 aa13.04□□□□□ -0.32
BRCA1-222ENST00000493919 NEDD9Q14511 834 aa13.04□□□□□ -0.32
BRCA1-222ENST00000493919 C8orf34Q49A92 452 aa13.04□□□□□ -0.32
BRCA1-222ENST00000493919 RNF20Q5VTR2 975 aa13.04□□□□□ -0.32
BRCA1-222ENST00000493919 MIPOL1Q8TD10 442 aa13.04□□□□□ -0.32
BRCA1-222ENST00000493919 PMM1Q92871 262 aa13.04□□□□□ -0.32
BRCA1-222ENST00000493919 GINM1Q9NU53 330 aa13.04□□□□□ -0.32
BRCA1-222ENST00000493919 SPATA7Q9P0W8 599 aa13.04□□□□□ -0.32
BRCA1-222ENST00000493919 TSKSQ9UJT2 592 aa13.04□□□□□ -0.32
BRCA1-222ENST00000493919 ITM2BQ9Y287 266 aa13.04□□□□□ -0.32
BRCA1-222ENST00000493919 TSPY2A6NKD2 308 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 CXCL11O14625 94 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 RANBP6O60518 1105 aaKnown RBP13.03□□□□□ -0.32
BRCA1-222ENST00000493919 ERLIN1O75477 346 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 TSPY3P0CV98 308 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 TSPY8P0CW00 308 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 GUCY1A2P33402 732 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 ABL2P42684 1182 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 HMGCS2P54868 508 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 SLC7A5Q01650 507 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 FAM47AQ5JRC9 791 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 SDCCAG8Q86SQ7 713 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-222ENST00000493919 ZNF397Q8NF99 534 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-222ENST00000493919 KCNB2Q92953 911 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 TBC1D2Q9BYX2 928 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 LMCD1Q9NZU5 365 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-222ENST00000493919 A0A0G2JLL6 359 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-222ENST00000493919 E2F6O75461 281 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 TRPA1O75762 1119 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 CAPN15O75808 1086 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 ZNF445P59923 1031 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 PKN1Q16512 942 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 SFMBT2Q5VUG0 894 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 MFSD6Q6ZSS7 791 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 PRRT2Q7Z6L0 340 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-222ENST00000493919 IFNL1Q8IU54 200 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 REM2Q8IYK8 340 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-222ENST00000493919 SPRYD3Q8NCJ5 442 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 NEK9Q8TD19 979 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 NACA2Q9H009 215 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 WBP1LQ9NX94 342 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.03□□□□□ -0.32
BRCA1-222ENST00000493919 RBM8AQ9Y5S9 174 aaKnown RBP13.03□□□□□ -0.32
BRCA1-222ENST00000493919 TACC3Q9Y6A5 838 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 NEDD4P46934 1319 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 LOC285556D6RIA3 1793 aa13.03□□□□□ -0.32
BRCA1-222ENST00000493919 GREB1LQ9C091 1923 aaPredicted RBP13.02□□□□□ -0.32
BRCA1-222ENST00000493919 USP17L10C9JJH3 530 aa13.02□□□□□ -0.32
BRCA1-222ENST00000493919 TM4SF4P48230 202 aa13.02□□□□□ -0.32
BRCA1-222ENST00000493919 TPM4P67936 248 aa13.02□□□□□ -0.32
BRCA1-222ENST00000493919 TFAP4Q01664 338 aa13.02□□□□□ -0.32
BRCA1-222ENST00000493919 NCBP1Q09161 790 aaKnown RBP13.02□□□□□ -0.32
BRCA1-222ENST00000493919 AKNAD1Q5T1N1 836 aa13.02□□□□□ -0.32
BRCA1-222ENST00000493919 ACER1Q8TDN7 264 aa13.02□□□□□ -0.32
BRCA1-222ENST00000493919 DHRS1Q96LJ7 313 aa13.02□□□□□ -0.32
BRCA1-222ENST00000493919 PTPN18Q99952 460 aa13.02□□□□□ -0.32
BRCA1-222ENST00000493919 WDR18Q9BV38 432 aa13.02□□□□□ -0.32
BRCA1-222ENST00000493919 LSG1Q9H089 658 aaKnown RBP13.02□□□□□ -0.32
BRCA1-222ENST00000493919 RNF41Q9H4P4 317 aaPredicted RBP13.02□□□□□ -0.32
BRCA1-222ENST00000493919 SLC24A3Q9HC58 644 aa13.02□□□□□ -0.32
BRCA1-222ENST00000493919 BTBD19C9JJ37 291 aa13.01□□□□□ -0.33
BRCA1-222ENST00000493919 BACE1P56817 501 aa13.01□□□□□ -0.33
BRCA1-222ENST00000493919 COL19A1Q14993 1142 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms